RNA–Protein interactions for RNA: ENST00000534286.5

SORL1-212, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-212ENST00000534286 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
SORL1-212ENST00000534286 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
SORL1-212ENST00000534286 MYT1Q01538 1121 aa14.96□□□□□ -0.01
SORL1-212ENST00000534286 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
SORL1-212ENST00000534286 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
SORL1-212ENST00000534286 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
SORL1-212ENST00000534286 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
SORL1-212ENST00000534286 APLP2Q06481 763 aa14.02□□□□□ -0.17
SORL1-212ENST00000534286 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
SORL1-212ENST00000534286 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
SORL1-212ENST00000534286 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
SORL1-212ENST00000534286 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
SORL1-212ENST00000534286 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
SORL1-212ENST00000534286 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
SORL1-212ENST00000534286 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
SORL1-212ENST00000534286 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
SORL1-212ENST00000534286 HRCP23327 699 aa13.49□□□□□ -0.25
SORL1-212ENST00000534286 EIF5BO60841 1220 aaKnown RBP13.38□□□□□ -0.27
SORL1-212ENST00000534286 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
SORL1-212ENST00000534286 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
SORL1-212ENST00000534286 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
SORL1-212ENST00000534286 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
SORL1-212ENST00000534286 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
SORL1-212ENST00000534286 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
SORL1-212ENST00000534286 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
SORL1-212ENST00000534286 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
SORL1-212ENST00000534286 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
SORL1-212ENST00000534286 NACADO15069 1562 aa12.88□□□□□ -0.35
SORL1-212ENST00000534286 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
SORL1-212ENST00000534286 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
SORL1-212ENST00000534286 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
SORL1-212ENST00000534286 ABCC9O60706 1549 aa12.83□□□□□ -0.36
SORL1-212ENST00000534286 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
SORL1-212ENST00000534286 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
SORL1-212ENST00000534286 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
SORL1-212ENST00000534286 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
SORL1-212ENST00000534286 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
SORL1-212ENST00000534286 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
SORL1-212ENST00000534286 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
SORL1-212ENST00000534286 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
SORL1-212ENST00000534286 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
SORL1-212ENST00000534286 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
SORL1-212ENST00000534286 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
SORL1-212ENST00000534286 KLHL34Q8N239 644 aa12.65□□□□□ -0.39
SORL1-212ENST00000534286 AEBP2Q6ZN18 517 aaPredicted RBP12.58□□□□□ -0.4
SORL1-212ENST00000534286 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
SORL1-212ENST00000534286 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
SORL1-212ENST00000534286 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
SORL1-212ENST00000534286 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
SORL1-212ENST00000534286 RANGAP1P46060 587 aaPredicted RBP12.5□□□□□ -0.41
SORL1-212ENST00000534286 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
SORL1-212ENST00000534286 UNC13AQ9UPW8 1703 aa12.5□□□□□ -0.41
SORL1-212ENST00000534286 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
SORL1-212ENST00000534286 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.42
SORL1-212ENST00000534286 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
SORL1-212ENST00000534286 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
SORL1-212ENST00000534286 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
SORL1-212ENST00000534286 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
SORL1-212ENST00000534286 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.43
SORL1-212ENST00000534286 ARXQ96QS3 562 aa12.38□□□□□ -0.43
SORL1-212ENST00000534286 PDE4CQ08493 712 aa12.38□□□□□ -0.43
SORL1-212ENST00000534286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
SORL1-212ENST00000534286 WIZO95785 1651 aa12.36□□□□□ -0.43
SORL1-212ENST00000534286 NEFLP07196 543 aa12.33□□□□□ -0.43
SORL1-212ENST00000534286 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
SORL1-212ENST00000534286 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
SORL1-212ENST00000534286 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
SORL1-212ENST00000534286 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SORL1-212ENST00000534286 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
SORL1-212ENST00000534286 A0A0U1RQG5 324 aaPredicted RBP12.23□□□□□ -0.45
SORL1-212ENST00000534286 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
SORL1-212ENST00000534286 EIF4G1Q04637 1599 aaKnown RBP12.2□□□□□ -0.46
SORL1-212ENST00000534286 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
SORL1-212ENST00000534286 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
SORL1-212ENST00000534286 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
SORL1-212ENST00000534286 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.47
SORL1-212ENST00000534286 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
SORL1-212ENST00000534286 FGD1P98174 961 aa12.14□□□□□ -0.47
SORL1-212ENST00000534286 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
SORL1-212ENST00000534286 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■□□□□ 8.9
SORL1-212ENST00000534286 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
SORL1-212ENST00000534286 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
SORL1-212ENST00000534286 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
SORL1-212ENST00000534286 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
SORL1-212ENST00000534286 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.48
SORL1-212ENST00000534286 HOMEZQ8IX15 550 aa12.02□□□□□ -0.49
SORL1-212ENST00000534286 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
SORL1-212ENST00000534286 ZMYND15Q9H091 742 aa12□□□□□ -0.49
SORL1-212ENST00000534286 AAMPQ13685 434 aa11.99□□□□□ -0.49
SORL1-212ENST00000534286 RBM10P98175 930 aaKnown RBP11.97□□□□□ -0.49
SORL1-212ENST00000534286 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
SORL1-212ENST00000534286 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
SORL1-212ENST00000534286 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.5
SORL1-212ENST00000534286 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
SORL1-212ENST00000534286 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
SORL1-212ENST00000534286 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
SORL1-212ENST00000534286 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
SORL1-212ENST00000534286 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
SORL1-212ENST00000534286 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
SORL1-212ENST00000534286 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms