RNA–Protein interactions for RNA: ENST00000531188.5

RPS3-217, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 2,097 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-217ENST00000531188 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
RPS3-217ENST00000531188 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.5
RPS3-217ENST00000531188 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
RPS3-217ENST00000531188 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
RPS3-217ENST00000531188 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
RPS3-217ENST00000531188 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
RPS3-217ENST00000531188 DCAF1Q9Y4B6 1507 aa22.6■■□□□ 1.21
RPS3-217ENST00000531188 ABCC9O60706 1549 aa22.6■■□□□ 1.21
RPS3-217ENST00000531188 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
RPS3-217ENST00000531188 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
RPS3-217ENST00000531188 NACADO15069 1562 aa22.19■■□□□ 1.14
RPS3-217ENST00000531188 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
RPS3-217ENST00000531188 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
RPS3-217ENST00000531188 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
RPS3-217ENST00000531188 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
RPS3-217ENST00000531188 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
RPS3-217ENST00000531188 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
RPS3-217ENST00000531188 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
RPS3-217ENST00000531188 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
RPS3-217ENST00000531188 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
RPS3-217ENST00000531188 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
RPS3-217ENST00000531188 WIZO95785 1651 aa21.12■□□□□ 0.97
RPS3-217ENST00000531188 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
RPS3-217ENST00000531188 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
RPS3-217ENST00000531188 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
RPS3-217ENST00000531188 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
RPS3-217ENST00000531188 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
RPS3-217ENST00000531188 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
RPS3-217ENST00000531188 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
RPS3-217ENST00000531188 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
RPS3-217ENST00000531188 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
RPS3-217ENST00000531188 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
RPS3-217ENST00000531188 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
RPS3-217ENST00000531188 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
RPS3-217ENST00000531188 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
RPS3-217ENST00000531188 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
RPS3-217ENST00000531188 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
RPS3-217ENST00000531188 CFTRP13569 1480 aa20.06■□□□□ 0.8
RPS3-217ENST00000531188 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.88e-7■□□□□ 9.9
RPS3-217ENST00000531188 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
RPS3-217ENST00000531188 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
RPS3-217ENST00000531188 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
RPS3-217ENST00000531188 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
RPS3-217ENST00000531188 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
RPS3-217ENST00000531188 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
RPS3-217ENST00000531188 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
RPS3-217ENST00000531188 NESP48681 1621 aa19.89■□□□□ 0.77
RPS3-217ENST00000531188 BIVM-ERCC5R4GMW8 1640 aa19.88■□□□□ 0.77
RPS3-217ENST00000531188 SOGA1O94964 1423 aa19.88■□□□□ 0.77
RPS3-217ENST00000531188 CUX1P39880 1505 aa19.85■□□□□ 0.77
RPS3-217ENST00000531188 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
RPS3-217ENST00000531188 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
RPS3-217ENST00000531188 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
RPS3-217ENST00000531188 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
RPS3-217ENST00000531188 EEA1Q15075 1411 aa19.72■□□□□ 0.75
RPS3-217ENST00000531188 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
RPS3-217ENST00000531188 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
RPS3-217ENST00000531188 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
RPS3-217ENST00000531188 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
RPS3-217ENST00000531188 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
RPS3-217ENST00000531188 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
RPS3-217ENST00000531188 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
RPS3-217ENST00000531188 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
RPS3-217ENST00000531188 KIF21BO75037 1637 aa19.54■□□□□ 0.72
RPS3-217ENST00000531188 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
RPS3-217ENST00000531188 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
RPS3-217ENST00000531188 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
RPS3-217ENST00000531188 CUX2O14529 1486 aa19.49■□□□□ 0.71
RPS3-217ENST00000531188 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
RPS3-217ENST00000531188 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
RPS3-217ENST00000531188 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
RPS3-217ENST00000531188 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
RPS3-217ENST00000531188 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
RPS3-217ENST00000531188 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
RPS3-217ENST00000531188 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
RPS3-217ENST00000531188 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
RPS3-217ENST00000531188 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
RPS3-217ENST00000531188 IGF1RP08069 1367 aa19.37■□□□□ 0.69
RPS3-217ENST00000531188 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
RPS3-217ENST00000531188 FOXD1Q16676 465 aa19.32■□□□□ 0.68
RPS3-217ENST00000531188 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
RPS3-217ENST00000531188 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
RPS3-217ENST00000531188 WDR62O43379 1518 aa19.28■□□□□ 0.68
RPS3-217ENST00000531188 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
RPS3-217ENST00000531188 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
RPS3-217ENST00000531188 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
RPS3-217ENST00000531188 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
RPS3-217ENST00000531188 HRCP23327 699 aa19.22■□□□□ 0.67
RPS3-217ENST00000531188 RANGAP1P46060 587 aaPredicted RBP19.22■□□□□ 0.67
RPS3-217ENST00000531188 CLIP1P30622 1438 aa19.21■□□□□ 0.67
RPS3-217ENST00000531188 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
RPS3-217ENST00000531188 CUL7Q14999 1698 aa19.2■□□□□ 0.66
RPS3-217ENST00000531188 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
RPS3-217ENST00000531188 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
RPS3-217ENST00000531188 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.651e-7■■■■■ 28
RPS3-217ENST00000531188 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
RPS3-217ENST00000531188 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
RPS3-217ENST00000531188 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
RPS3-217ENST00000531188 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
RPS3-217ENST00000531188 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms