RNA–Protein interactions for RNA: ENST00000527934.1

SORL1-206, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-206ENST00000527934 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
SORL1-206ENST00000527934 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
SORL1-206ENST00000527934 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
SORL1-206ENST00000527934 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
SORL1-206ENST00000527934 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
SORL1-206ENST00000527934 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
SORL1-206ENST00000527934 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
SORL1-206ENST00000527934 ABCC9O60706 1549 aa19■□□□□ 0.63
SORL1-206ENST00000527934 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
SORL1-206ENST00000527934 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
SORL1-206ENST00000527934 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
SORL1-206ENST00000527934 NACADO15069 1562 aa18.53■□□□□ 0.56
SORL1-206ENST00000527934 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
SORL1-206ENST00000527934 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
SORL1-206ENST00000527934 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.53
SORL1-206ENST00000527934 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
SORL1-206ENST00000527934 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
SORL1-206ENST00000527934 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.511e-7■□□□□ 8.9
SORL1-206ENST00000527934 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
SORL1-206ENST00000527934 WIZO95785 1651 aa18.1■□□□□ 0.49
SORL1-206ENST00000527934 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
SORL1-206ENST00000527934 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
SORL1-206ENST00000527934 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.47
SORL1-206ENST00000527934 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
SORL1-206ENST00000527934 MYT1Q01538 1121 aa17.99■□□□□ 0.47
SORL1-206ENST00000527934 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
SORL1-206ENST00000527934 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
SORL1-206ENST00000527934 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
SORL1-206ENST00000527934 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
SORL1-206ENST00000527934 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SORL1-206ENST00000527934 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
SORL1-206ENST00000527934 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
SORL1-206ENST00000527934 ABCC8Q09428 1581 aa17.64■□□□□ 0.42
SORL1-206ENST00000527934 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
SORL1-206ENST00000527934 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
SORL1-206ENST00000527934 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
SORL1-206ENST00000527934 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
SORL1-206ENST00000527934 HRCP23327 699 aa17.47■□□□□ 0.39
SORL1-206ENST00000527934 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
SORL1-206ENST00000527934 SOGA1O94964 1423 aa17.44■□□□□ 0.38
SORL1-206ENST00000527934 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
SORL1-206ENST00000527934 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.38
SORL1-206ENST00000527934 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
SORL1-206ENST00000527934 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
SORL1-206ENST00000527934 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
SORL1-206ENST00000527934 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
SORL1-206ENST00000527934 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
SORL1-206ENST00000527934 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
SORL1-206ENST00000527934 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
SORL1-206ENST00000527934 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
SORL1-206ENST00000527934 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
SORL1-206ENST00000527934 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
SORL1-206ENST00000527934 EEA1Q15075 1411 aa17.11■□□□□ 0.33
SORL1-206ENST00000527934 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
SORL1-206ENST00000527934 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
SORL1-206ENST00000527934 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
SORL1-206ENST00000527934 CFTRP13569 1480 aa16.99■□□□□ 0.31
SORL1-206ENST00000527934 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
SORL1-206ENST00000527934 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
SORL1-206ENST00000527934 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
SORL1-206ENST00000527934 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
SORL1-206ENST00000527934 CUX1P39880 1505 aa16.97■□□□□ 0.31
SORL1-206ENST00000527934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
SORL1-206ENST00000527934 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
SORL1-206ENST00000527934 CLIP1P30622 1438 aa16.91■□□□□ 0.3
SORL1-206ENST00000527934 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
SORL1-206ENST00000527934 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
SORL1-206ENST00000527934 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SORL1-206ENST00000527934 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
SORL1-206ENST00000527934 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
SORL1-206ENST00000527934 APLP2Q06481 763 aa16.83■□□□□ 0.28
SORL1-206ENST00000527934 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
SORL1-206ENST00000527934 NESP48681 1621 aa16.82■□□□□ 0.28
SORL1-206ENST00000527934 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
SORL1-206ENST00000527934 CUX2O14529 1486 aa16.78■□□□□ 0.28
SORL1-206ENST00000527934 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
SORL1-206ENST00000527934 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
SORL1-206ENST00000527934 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
SORL1-206ENST00000527934 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
SORL1-206ENST00000527934 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
SORL1-206ENST00000527934 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
SORL1-206ENST00000527934 IGF1RP08069 1367 aa16.71■□□□□ 0.27
SORL1-206ENST00000527934 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
SORL1-206ENST00000527934 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
SORL1-206ENST00000527934 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
SORL1-206ENST00000527934 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
SORL1-206ENST00000527934 P3H3Q8IVL6 736 aa16.64■□□□□ 0.26
SORL1-206ENST00000527934 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
SORL1-206ENST00000527934 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
SORL1-206ENST00000527934 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
SORL1-206ENST00000527934 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.24
SORL1-206ENST00000527934 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
SORL1-206ENST00000527934 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
SORL1-206ENST00000527934 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
SORL1-206ENST00000527934 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
SORL1-206ENST00000527934 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
SORL1-206ENST00000527934 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
SORL1-206ENST00000527934 ITGAEP38570 1179 aa16.5■□□□□ 0.23
SORL1-206ENST00000527934 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
SORL1-206ENST00000527934 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms