RNA–Protein interactions for RNA: ENST00000524633.1

SORL1-202, Transcript of sortilin related receptor 1, humanhuman

TSL 5

Gene SORL1, Length 1,338 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-202ENST00000524633 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
SORL1-202ENST00000524633 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
SORL1-202ENST00000524633 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
SORL1-202ENST00000524633 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
SORL1-202ENST00000524633 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
SORL1-202ENST00000524633 ABCC9O60706 1549 aa19.21■□□□□ 0.67
SORL1-202ENST00000524633 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
SORL1-202ENST00000524633 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
SORL1-202ENST00000524633 FOXD1Q16676 465 aa18.26■□□□□ 0.51
SORL1-202ENST00000524633 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
SORL1-202ENST00000524633 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
SORL1-202ENST00000524633 NACADO15069 1562 aa17.74■□□□□ 0.43
SORL1-202ENST00000524633 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
SORL1-202ENST00000524633 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
SORL1-202ENST00000524633 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SORL1-202ENST00000524633 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
SORL1-202ENST00000524633 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
SORL1-202ENST00000524633 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
SORL1-202ENST00000524633 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
SORL1-202ENST00000524633 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
SORL1-202ENST00000524633 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
SORL1-202ENST00000524633 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
SORL1-202ENST00000524633 MSH5O43196 834 aa17.1■□□□□ 0.33
SORL1-202ENST00000524633 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
SORL1-202ENST00000524633 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
SORL1-202ENST00000524633 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
SORL1-202ENST00000524633 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
SORL1-202ENST00000524633 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
SORL1-202ENST00000524633 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
SORL1-202ENST00000524633 ADRA2BP18089 450 aa16.84■□□□□ 0.29
SORL1-202ENST00000524633 CUX2O14529 1486 aa16.74■□□□□ 0.27
SORL1-202ENST00000524633 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
SORL1-202ENST00000524633 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
SORL1-202ENST00000524633 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
SORL1-202ENST00000524633 NESP48681 1621 aa16.37■□□□□ 0.21
SORL1-202ENST00000524633 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
SORL1-202ENST00000524633 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
SORL1-202ENST00000524633 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
SORL1-202ENST00000524633 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
SORL1-202ENST00000524633 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
SORL1-202ENST00000524633 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
SORL1-202ENST00000524633 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
SORL1-202ENST00000524633 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
SORL1-202ENST00000524633 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
SORL1-202ENST00000524633 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
SORL1-202ENST00000524633 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
SORL1-202ENST00000524633 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
SORL1-202ENST00000524633 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
SORL1-202ENST00000524633 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
SORL1-202ENST00000524633 WDR62O43379 1518 aa15.9■□□□□ 0.14
SORL1-202ENST00000524633 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
SORL1-202ENST00000524633 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
SORL1-202ENST00000524633 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
SORL1-202ENST00000524633 CYB5RLQ6IPT4 315 aa15.68■□□□□ 0.1
SORL1-202ENST00000524633 RIMBP3CA6NJZ7 1639 aa15.67■□□□□ 0.1
SORL1-202ENST00000524633 RIMBP3BA6NNM3 1639 aa15.67■□□□□ 0.1
SORL1-202ENST00000524633 RIMBP3Q9UFD9 1639 aa15.67■□□□□ 0.1
SORL1-202ENST00000524633 CFTRP13569 1480 aa15.65■□□□□ 0.1
SORL1-202ENST00000524633 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
SORL1-202ENST00000524633 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
SORL1-202ENST00000524633 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
SORL1-202ENST00000524633 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
SORL1-202ENST00000524633 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
SORL1-202ENST00000524633 WIZO95785 1651 aa15.54■□□□□ 0.08
SORL1-202ENST00000524633 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
SORL1-202ENST00000524633 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
SORL1-202ENST00000524633 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
SORL1-202ENST00000524633 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
SORL1-202ENST00000524633 FBLN2P98095 1184 aa15.4■□□□□ 0.06
SORL1-202ENST00000524633 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
SORL1-202ENST00000524633 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
SORL1-202ENST00000524633 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
SORL1-202ENST00000524633 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
SORL1-202ENST00000524633 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
SORL1-202ENST00000524633 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
SORL1-202ENST00000524633 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
SORL1-202ENST00000524633 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
SORL1-202ENST00000524633 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
SORL1-202ENST00000524633 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
SORL1-202ENST00000524633 CHD1O14646 1710 aa15.2■□□□□ 0.02
SORL1-202ENST00000524633 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
SORL1-202ENST00000524633 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
SORL1-202ENST00000524633 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
SORL1-202ENST00000524633 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
SORL1-202ENST00000524633 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
SORL1-202ENST00000524633 SOGA1O94964 1423 aa15.16■□□□□ 0.02
SORL1-202ENST00000524633 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
SORL1-202ENST00000524633 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
SORL1-202ENST00000524633 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
SORL1-202ENST00000524633 SYNJ1O43426 1573 aa15.06■□□□□ 0
SORL1-202ENST00000524633 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
SORL1-202ENST00000524633 SYNJ2O15056 1496 aa15.04■□□□□ -0
SORL1-202ENST00000524633 GRIN2BQ13224 1484 aa15.04■□□□□ -0
SORL1-202ENST00000524633 ILDR1Q86SU0 546 aaPredicted RBP15.01□□□□□ -0.01
SORL1-202ENST00000524633 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
SORL1-202ENST00000524633 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
SORL1-202ENST00000524633 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
SORL1-202ENST00000524633 ERCC6L2Q5T890 1561 aa14.93□□□□□ -0.02
SORL1-202ENST00000524633 CUX1P39880 1505 aa14.91□□□□□ -0.02
SORL1-202ENST00000524633 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms