Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.56■■■□□ 2.64
APPP05067 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
APPP05067 AC108673.1-201ENST00000510422 1159 ntBASIC31.55■■■□□ 2.64
APPP05067 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
APPP05067 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.54■■■□□ 2.64
APPP05067 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.53■■■□□ 2.64
APPP05067 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
APPP05067 MIR6090-201ENST00000622481 60 ntBASIC31.53■■■□□ 2.64
APPP05067 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
APPP05067 AL135925.1-201ENST00000605920 1701 ntBASIC31.52■■■□□ 2.64
APPP05067 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.52■■■□□ 2.64
APPP05067 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
APPP05067 AC010864.1-201ENST00000609407 1511 ntBASIC31.52■■■□□ 2.64
APPP05067 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
APPP05067 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
APPP05067 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
APPP05067 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
APPP05067 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.49■■■□□ 2.63
APPP05067 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
APPP05067 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.49■■■□□ 2.63
APPP05067 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
APPP05067 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.48■■■□□ 2.63
APPP05067 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.46■■■□□ 2.63
APPP05067 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
APPP05067 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
APPP05067 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
APPP05067 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.43■■■□□ 2.62
APPP05067 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.43■■■□□ 2.62
APPP05067 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
APPP05067 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
APPP05067 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
APPP05067 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.39■■■□□ 2.62
APPP05067 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
APPP05067 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.38■■■□□ 2.61
APPP05067 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
APPP05067 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.38■■■□□ 2.61
APPP05067 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
APPP05067 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
APPP05067 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
APPP05067 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
APPP05067 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
APPP05067 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
APPP05067 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
APPP05067 DUX4L29-201ENST00000425409 679 ntBASIC31.35■■■□□ 2.61
APPP05067 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
APPP05067 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
APPP05067 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
APPP05067 ST7-AS1-201ENST00000456775 1889 ntBASIC31.33■■■□□ 2.61
APPP05067 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
APPP05067 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.33■■■□□ 2.61
APPP05067 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.33■■■□□ 2.61
APPP05067 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.33■■■□□ 2.61
APPP05067 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.33■■■□□ 2.61
APPP05067 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
APPP05067 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.31■■■□□ 2.6
APPP05067 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
APPP05067 AC021231.2-201ENST00000594613 730 ntBASIC31.3■■■□□ 2.6
APPP05067 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
APPP05067 ABHD17AP4-201ENST00000411545 909 ntBASIC31.29■■■□□ 2.6
APPP05067 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.28■■■□□ 2.6
APPP05067 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.28■■■□□ 2.6
APPP05067 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
APPP05067 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
APPP05067 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
APPP05067 ABCB10P1-201ENST00000614297 2181 ntBASIC31.25■■■□□ 2.59
APPP05067 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
APPP05067 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
APPP05067 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
APPP05067 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
APPP05067 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
APPP05067 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
APPP05067 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
APPP05067 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
APPP05067 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.21■■■□□ 2.59
APPP05067 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
APPP05067 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
APPP05067 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
APPP05067 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.2■■■□□ 2.59
APPP05067 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
APPP05067 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
APPP05067 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
APPP05067 ZNRF2P2-203ENST00000454624 420 ntBASIC31.18■■■□□ 2.58
APPP05067 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.17■■■□□ 2.58
APPP05067 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
APPP05067 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
APPP05067 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
APPP05067 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
APPP05067 AC127502.1-201ENST00000399971 1502 ntBASIC31.16■■■□□ 2.58
APPP05067 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.16■■■□□ 2.58
APPP05067 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
APPP05067 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.16■■■□□ 2.58
APPP05067 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
APPP05067 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.15■■■□□ 2.58
APPP05067 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
APPP05067 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.15■■■□□ 2.58
APPP05067 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
APPP05067 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.14■■■□□ 2.58
APPP05067 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
APPP05067 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
APPP05067 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms