Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRAP04437 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRAP04437 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TCRAP04437 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRAP04437 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRAP04437 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRAP04437 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRAP04437 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRAP04437 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRAP04437 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRAP04437 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRAP04437 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRAP04437 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TCRAP04437 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
TCRAP04437 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRAP04437 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.89■□□□□ 0.77
TCRAP04437 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRAP04437 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRAP04437 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRAP04437 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRAP04437 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRAP04437 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRAP04437 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRAP04437 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRAP04437 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRAP04437 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRAP04437 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRAP04437 AL121749.1-202ENST00000609313 2153 ntBASIC19.86■□□□□ 0.77
TCRAP04437 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRAP04437 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRAP04437 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRAP04437 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRAP04437 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRAP04437 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TCRAP04437 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TCRAP04437 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRAP04437 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRAP04437 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRAP04437 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRAP04437 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TCRAP04437 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TCRAP04437 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRAP04437 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRAP04437 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRAP04437 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRAP04437 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRAP04437 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRAP04437 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRAP04437 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRAP04437 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRAP04437 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRAP04437 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRAP04437 WASH5P-204ENST00000632292 975 ntBASIC19.79■□□□□ 0.76
TCRAP04437 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRAP04437 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRAP04437 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TCRAP04437 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TCRAP04437 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRAP04437 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRAP04437 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRAP04437 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRAP04437 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRAP04437 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRAP04437 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRAP04437 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRAP04437 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
TCRAP04437 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRAP04437 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRAP04437 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.76■□□□□ 0.75
TCRAP04437 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRAP04437 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRAP04437 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRAP04437 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TCRAP04437 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TCRAP04437 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRAP04437 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRAP04437 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRAP04437 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRAP04437 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRAP04437 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
TCRAP04437 AC010864.1-201ENST00000609407 1511 ntBASIC19.72■□□□□ 0.75
TCRAP04437 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRAP04437 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRAP04437 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRAP04437 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRAP04437 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRAP04437 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TCRAP04437 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRAP04437 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TCRAP04437 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRAP04437 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TCRAP04437 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRAP04437 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRAP04437 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRAP04437 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TCRAP04437 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TCRAP04437 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.69■□□□□ 0.74
TCRAP04437 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRAP04437 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRAP04437 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms