Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SIRPB1O00241 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIRPB1O00241 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
SIRPB1O00241 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIRPB1O00241 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIRPB1O00241 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.11■■□□□ 1.13
SIRPB1O00241 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.11■■□□□ 1.13
SIRPB1O00241 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIRPB1O00241 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SIRPB1O00241 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SIRPB1O00241 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIRPB1O00241 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SIRPB1O00241 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIRPB1O00241 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIRPB1O00241 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.1■■□□□ 1.13
SIRPB1O00241 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SIRPB1O00241 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIRPB1O00241 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.09■■□□□ 1.13
SIRPB1O00241 AC010864.1-201ENST00000609407 1511 ntBASIC22.09■■□□□ 1.13
SIRPB1O00241 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.08■■□□□ 1.13
SIRPB1O00241 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SIRPB1O00241 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.08■■□□□ 1.13
SIRPB1O00241 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SIRPB1O00241 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SIRPB1O00241 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SIRPB1O00241 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIRPB1O00241 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIRPB1O00241 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SIRPB1O00241 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.05■■□□□ 1.12
SIRPB1O00241 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.04■■□□□ 1.12
SIRPB1O00241 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.04■■□□□ 1.12
SIRPB1O00241 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIRPB1O00241 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIRPB1O00241 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIRPB1O00241 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SIRPB1O00241 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIRPB1O00241 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIRPB1O00241 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SIRPB1O00241 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIRPB1O00241 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.01■■□□□ 1.11
SIRPB1O00241 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SIRPB1O00241 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.01■■□□□ 1.11
SIRPB1O00241 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22■■□□□ 1.11
SIRPB1O00241 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIRPB1O00241 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIRPB1O00241 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.99■■□□□ 1.11
SIRPB1O00241 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIRPB1O00241 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.98■■□□□ 1.11
SIRPB1O00241 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIRPB1O00241 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.97■■□□□ 1.11
SIRPB1O00241 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SIRPB1O00241 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SIRPB1O00241 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIRPB1O00241 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIRPB1O00241 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIRPB1O00241 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIRPB1O00241 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIRPB1O00241 MIR762-201ENST00000390236 83 ntBASIC21.95■■□□□ 1.1
SIRPB1O00241 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.95■■□□□ 1.1
SIRPB1O00241 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIRPB1O00241 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIRPB1O00241 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIRPB1O00241 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIRPB1O00241 SUZ12P1-203ENST00000578195 985 ntBASIC21.94■■□□□ 1.1
SIRPB1O00241 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIRPB1O00241 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIRPB1O00241 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SIRPB1O00241 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIRPB1O00241 AL139393.2-201ENST00000608721 2025 ntBASIC21.93■■□□□ 1.1
SIRPB1O00241 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIRPB1O00241 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.92■■□□□ 1.1
SIRPB1O00241 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIRPB1O00241 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SIRPB1O00241 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SIRPB1O00241 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SIRPB1O00241 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.91■■□□□ 1.1
SIRPB1O00241 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
SIRPB1O00241 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SIRPB1O00241 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SIRPB1O00241 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.9■■□□□ 1.1
SIRPB1O00241 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIRPB1O00241 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.89■■□□□ 1.09
SIRPB1O00241 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIRPB1O00241 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIRPB1O00241 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SIRPB1O00241 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.89■■□□□ 1.09
SIRPB1O00241 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIRPB1O00241 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SIRPB1O00241 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.87■■□□□ 1.09
SIRPB1O00241 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIRPB1O00241 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIRPB1O00241 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIRPB1O00241 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SIRPB1O00241 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIRPB1O00241 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIRPB1O00241 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIRPB1O00241 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.85■■□□□ 1.09
SIRPB1O00241 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.85■■□□□ 1.09
SIRPB1O00241 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
SIRPB1O00241 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms