Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01548A6NM66 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01548A6NM66 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01548A6NM66 MIR6090-201ENST00000622481 60 ntBASIC20.84■□□□□ 0.93
LINC01548A6NM66 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC01548A6NM66 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.83■□□□□ 0.93
LINC01548A6NM66 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01548A6NM66 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01548A6NM66 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LINC01548A6NM66 AC010864.1-201ENST00000609407 1511 ntBASIC20.83■□□□□ 0.92
LINC01548A6NM66 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC01548A6NM66 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC01548A6NM66 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC01548A6NM66 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LINC01548A6NM66 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01548A6NM66 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LINC01548A6NM66 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
LINC01548A6NM66 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01548A6NM66 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01548A6NM66 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01548A6NM66 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01548A6NM66 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.79■□□□□ 0.92
LINC01548A6NM66 AC108673.1-201ENST00000510422 1159 ntBASIC20.79■□□□□ 0.92
LINC01548A6NM66 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC01548A6NM66 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01548A6NM66 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01548A6NM66 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01548A6NM66 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC01548A6NM66 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINC01548A6NM66 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LINC01548A6NM66 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01548A6NM66 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01548A6NM66 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01548A6NM66 ST7-AS1-201ENST00000456775 1889 ntBASIC20.75■□□□□ 0.91
LINC01548A6NM66 ABCB10P1-201ENST00000614297 2181 ntBASIC20.75■□□□□ 0.91
LINC01548A6NM66 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LINC01548A6NM66 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01548A6NM66 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01548A6NM66 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01548A6NM66 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01548A6NM66 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.73■□□□□ 0.91
LINC01548A6NM66 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LINC01548A6NM66 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01548A6NM66 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01548A6NM66 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01548A6NM66 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01548A6NM66 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01548A6NM66 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01548A6NM66 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC01548A6NM66 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LINC01548A6NM66 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINC01548A6NM66 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01548A6NM66 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC01548A6NM66 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01548A6NM66 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01548A6NM66 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01548A6NM66 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC01548A6NM66 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01548A6NM66 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01548A6NM66 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01548A6NM66 AC021231.2-201ENST00000594613 730 ntBASIC20.66■□□□□ 0.9
LINC01548A6NM66 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01548A6NM66 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
LINC01548A6NM66 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC01548A6NM66 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01548A6NM66 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC01548A6NM66 ABHD17AP4-201ENST00000411545 909 ntBASIC20.64■□□□□ 0.89
LINC01548A6NM66 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.64■□□□□ 0.89
LINC01548A6NM66 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01548A6NM66 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01548A6NM66 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01548A6NM66 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01548A6NM66 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC01548A6NM66 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01548A6NM66 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01548A6NM66 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LINC01548A6NM66 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC01548A6NM66 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01548A6NM66 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01548A6NM66 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01548A6NM66 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01548A6NM66 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01548A6NM66 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.61■□□□□ 0.89
LINC01548A6NM66 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01548A6NM66 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.6■□□□□ 0.89
LINC01548A6NM66 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01548A6NM66 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01548A6NM66 AC127502.1-201ENST00000399971 1502 ntBASIC20.59■□□□□ 0.89
LINC01548A6NM66 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01548A6NM66 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01548A6NM66 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
LINC01548A6NM66 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01548A6NM66 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01548A6NM66 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01548A6NM66 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01548A6NM66 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01548A6NM66 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01548A6NM66 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LINC01548A6NM66 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LINC01548A6NM66 ZNRF2P2-203ENST00000454624 420 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms