Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.83■□□□□ 0.61
LINC01546A6NGU7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01546A6NGU7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01546A6NGU7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01546A6NGU7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC01546A6NGU7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LINC01546A6NGU7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01546A6NGU7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01546A6NGU7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01546A6NGU7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01546A6NGU7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
LINC01546A6NGU7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01546A6NGU7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01546A6NGU7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01546A6NGU7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LINC01546A6NGU7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
LINC01546A6NGU7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC01546A6NGU7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01546A6NGU7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01546A6NGU7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01546A6NGU7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01546A6NGU7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01546A6NGU7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC01546A6NGU7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01546A6NGU7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01546A6NGU7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01546A6NGU7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC01546A6NGU7 BX255925.1-201ENST00000566954 1854 ntBASIC18.71■□□□□ 0.59
LINC01546A6NGU7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01546A6NGU7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01546A6NGU7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01546A6NGU7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01546A6NGU7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.69■□□□□ 0.58
LINC01546A6NGU7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01546A6NGU7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LINC01546A6NGU7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01546A6NGU7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01546A6NGU7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01546A6NGU7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01546A6NGU7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01546A6NGU7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01546A6NGU7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC01546A6NGU7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01546A6NGU7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01546A6NGU7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01546A6NGU7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01546A6NGU7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01546A6NGU7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LINC01546A6NGU7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01546A6NGU7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01546A6NGU7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01546A6NGU7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01546A6NGU7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01546A6NGU7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01546A6NGU7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01546A6NGU7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01546A6NGU7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01546A6NGU7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01546A6NGU7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01546A6NGU7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01546A6NGU7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LINC01546A6NGU7 AL449106.1-201ENST00000608517 1980 ntBASIC18.61■□□□□ 0.57
LINC01546A6NGU7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01546A6NGU7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01546A6NGU7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LINC01546A6NGU7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.58■□□□□ 0.56
LINC01546A6NGU7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01546A6NGU7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01546A6NGU7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LINC01546A6NGU7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01546A6NGU7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01546A6NGU7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01546A6NGU7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms