Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 DUX4L13-201ENST00000554103 1267 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L15-201ENST00000611059 1267 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L23-201ENST00000615195 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L24-201ENST00000617576 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L22-201ENST00000618238 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L20-201ENST00000619712 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L21-201ENST00000622058 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L10-201ENST00000622460 1267 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 DUX4L25-201ENST00000624915 1269 ntBASIC23.68■■□□□ 1.38
TRGV8A0A0C4DH27 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.67■■□□□ 1.38
TRGV8A0A0C4DH27 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRGV8A0A0C4DH27 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.67■■□□□ 1.38
TRGV8A0A0C4DH27 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRGV8A0A0C4DH27 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.65■■□□□ 1.38
TRGV8A0A0C4DH27 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.65■■□□□ 1.38
TRGV8A0A0C4DH27 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.65■■□□□ 1.38
TRGV8A0A0C4DH27 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRGV8A0A0C4DH27 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRGV8A0A0C4DH27 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.64■■□□□ 1.37
TRGV8A0A0C4DH27 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRGV8A0A0C4DH27 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRGV8A0A0C4DH27 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRGV8A0A0C4DH27 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRGV8A0A0C4DH27 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.63■■□□□ 1.37
TRGV8A0A0C4DH27 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRGV8A0A0C4DH27 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRGV8A0A0C4DH27 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRGV8A0A0C4DH27 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.62■■□□□ 1.37
TRGV8A0A0C4DH27 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRGV8A0A0C4DH27 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.6■■□□□ 1.37
TRGV8A0A0C4DH27 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRGV8A0A0C4DH27 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRGV8A0A0C4DH27 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRGV8A0A0C4DH27 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.58■■□□□ 1.37
TRGV8A0A0C4DH27 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.58■■□□□ 1.37
TRGV8A0A0C4DH27 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRGV8A0A0C4DH27 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRGV8A0A0C4DH27 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TRGV8A0A0C4DH27 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRGV8A0A0C4DH27 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRGV8A0A0C4DH27 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRGV8A0A0C4DH27 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRGV8A0A0C4DH27 AC120057.4-201ENST00000624722 1615 ntBASIC23.55■■□□□ 1.36
TRGV8A0A0C4DH27 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRGV8A0A0C4DH27 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.55■■□□□ 1.36
TRGV8A0A0C4DH27 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRGV8A0A0C4DH27 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRGV8A0A0C4DH27 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRGV8A0A0C4DH27 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRGV8A0A0C4DH27 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.53■■□□□ 1.36
TRGV8A0A0C4DH27 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.53■■□□□ 1.36
TRGV8A0A0C4DH27 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TRGV8A0A0C4DH27 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRGV8A0A0C4DH27 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.52■■□□□ 1.36
TRGV8A0A0C4DH27 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TRGV8A0A0C4DH27 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRGV8A0A0C4DH27 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.5■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRGV8A0A0C4DH27 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRGV8A0A0C4DH27 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.47■■□□□ 1.35
TRGV8A0A0C4DH27 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TRGV8A0A0C4DH27 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRGV8A0A0C4DH27 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.47■■□□□ 1.35
TRGV8A0A0C4DH27 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRGV8A0A0C4DH27 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.45■■□□□ 1.34
TRGV8A0A0C4DH27 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.45■■□□□ 1.34
TRGV8A0A0C4DH27 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
TRGV8A0A0C4DH27 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRGV8A0A0C4DH27 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.44■■□□□ 1.34
TRGV8A0A0C4DH27 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.44■■□□□ 1.34
TRGV8A0A0C4DH27 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRGV8A0A0C4DH27 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRGV8A0A0C4DH27 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.42■■□□□ 1.34
TRGV8A0A0C4DH27 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.42■■□□□ 1.34
TRGV8A0A0C4DH27 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRGV8A0A0C4DH27 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRGV8A0A0C4DH27 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRGV8A0A0C4DH27 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.41■■□□□ 1.34
TRGV8A0A0C4DH27 RARRES2P2-201ENST00000394842 485 ntBASIC23.41■■□□□ 1.34
TRGV8A0A0C4DH27 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRGV8A0A0C4DH27 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRGV8A0A0C4DH27 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.39■■□□□ 1.34
TRGV8A0A0C4DH27 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRGV8A0A0C4DH27 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.39■■□□□ 1.33
TRGV8A0A0C4DH27 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRGV8A0A0C4DH27 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms