Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHAC2Q9Y5I4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHAC2Q9Y5I4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHAC2Q9Y5I4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHAC2Q9Y5I4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 AL356652.1-201ENST00000615962 565 ntBASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHAC2Q9Y5I4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHAC2Q9Y5I4 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 KRASP1-201ENST00000407852 552 ntBASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 AC012618.2-201ENST00000428058 849 ntBASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 AC133681.1-201ENST00000465482 601 ntBASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 BX088651.1-201ENST00000540551 451 ntBASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHAC2Q9Y5I4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 AC239809.2-201ENST00000415381 517 ntBASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHAC2Q9Y5I4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 AL049637.2-201ENST00000641778 930 ntBASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHAC2Q9Y5I4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHAC2Q9Y5I4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms