RNA–Protein interactions for RNA: ENST00000506380.5

HGNC:18790-208, human

APPRIS P1 TSL 3 BASIC

Gene HGNC:18790, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HGNC:18790-208	ENST00000506380	NISCH	Q9Y2I1	1504 aa		48.2	■■■■■ 5.31
HGNC:18790-208	ENST00000506380	CCDC180	Q9P1Z9	1646 aa		42.9	■■■■■ 4.46
HGNC:18790-208	ENST00000506380	ABCC9	O60706	1549 aa		42.33	■■■■■ 4.37
HGNC:18790-208	ENST00000506380	RB1CC1	Q8TDY2	1594 aa		40.48	■■■■■ 4.07
HGNC:18790-208	ENST00000506380	DCAF8L2	P0C7V8	631 aa		40.39	■■■■■ 4.06
HGNC:18790-208	ENST00000506380	NACAD	O15069	1562 aa		40.36	■■■■■ 4.05
HGNC:18790-208	ENST00000506380	ZCCHC6	Q5VYS8	1495 aa	Known RBP	40.11	■■■■■ 4.01
HGNC:18790-208	ENST00000506380	MYO15B	Q96JP2	1530 aa		40	■■■■□ 3.99
HGNC:18790-208	ENST00000506380	DCAF1	Q9Y4B6	1507 aa		39.78	■■■■□ 3.96
HGNC:18790-208	ENST00000506380	UNC13A	Q9UPW8	1703 aa		39.74	■■■■□ 3.95
HGNC:18790-208	ENST00000506380	PABPN1	Q86U42	306 aa	Known RBP eCLIP	39.54	■■■■□ 3.92
HGNC:18790-208	ENST00000506380	BICRA	Q9NZM4	1560 aa		39.41	■■■■□ 3.9
HGNC:18790-208	ENST00000506380	SCRIB	Q14160	1630 aa		39.25	■■■■□ 3.87
HGNC:18790-208	ENST00000506380	DNAJC5B	Q9UF47	199 aa		39.15	■■■■□ 3.86
HGNC:18790-208	ENST00000506380	SHROOM4	Q9ULL8	1493 aa		38.73	■■■■□ 3.79
HGNC:18790-208	ENST00000506380	EIF4G1	Q04637	1599 aa	Known RBP	38.33	■■■■□ 3.73
HGNC:18790-208	ENST00000506380	CC2D2A	Q9P2K1	1620 aa		38.25	■■■■□ 3.71
HGNC:18790-208	ENST00000506380	CECR2	Q9BXF3	1484 aa		38	■■■■□ 3.67
HGNC:18790-208	ENST00000506380	SMARCA4	P51532	1647 aa		37.47	■■■■□ 3.59
HGNC:18790-208	ENST00000506380	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	37.32	■■■■□ 3.56
HGNC:18790-208	ENST00000506380	ATAD2B	Q9ULI0	1458 aa		37.31	■■■■□ 3.56
HGNC:18790-208	ENST00000506380	NCAPD3	P42695	1498 aa		37.27	■■■■□ 3.56
HGNC:18790-208	ENST00000506380	MROH2B	Q7Z745	1585 aa		37.22	■■■■□ 3.55
HGNC:18790-208	ENST00000506380	SMARCA2	P51531	1590 aa		37.18	■■■■□ 3.54
HGNC:18790-208	ENST00000506380	HMGXB3	Q12766	1538 aa		37.07	■■■■□ 3.53
HGNC:18790-208	ENST00000506380	PEG3	Q9GZU2	1588 aa		37.05	■■■■□ 3.52
HGNC:18790-208	ENST00000506380	BAZ1B	Q9UIG0	1483 aa	Known RBP	36.96	■■■■□ 3.51
HGNC:18790-208	ENST00000506380	WIZ	O95785	1651 aa		36.83	■■■■□ 3.49
HGNC:18790-208	ENST00000506380	RSF1	Q96T23	1441 aa	Predicted RBP	36.67	■■■■□ 3.46
HGNC:18790-208	ENST00000506380	NES	P48681	1621 aa		36.61	■■■■□ 3.45
HGNC:18790-208	ENST00000506380	ERCC6	Q03468	1493 aa		36.41	■■■■□ 3.42
HGNC:18790-208	ENST00000506380	TOP2A	P11388	1531 aa	Known RBP	36.34	■■■■□ 3.41
HGNC:18790-208	ENST00000506380	LAMC3	Q9Y6N6	1575 aa		36.32	■■■■□ 3.4
HGNC:18790-208	ENST00000506380	CADPS	Q9ULU8	1353 aa		36.18	■■■■□ 3.38
HGNC:18790-208	ENST00000506380	KIF21A	Q7Z4S6	1674 aa		36.14	■■■■□ 3.38
HGNC:18790-208	ENST00000506380	CUX2	O14529	1486 aa		36.06	■■■■□ 3.36
HGNC:18790-208	ENST00000506380	THOC2	Q8NI27	1593 aa	Known RBP	36.05	■■■■□ 3.36
HGNC:18790-208	ENST00000506380	PDS5B	Q9NTI5	1447 aa		36.04	■■■■□ 3.36
HGNC:18790-208	ENST00000506380	CCDC88B	A6NC98	1476 aa		35.94	■■■■□ 3.34
HGNC:18790-208	ENST00000506380	CFTR	P13569	1480 aa		35.93	■■■■□ 3.34
HGNC:18790-208	ENST00000506380	FANCD2	Q9BXW9	1451 aa		35.8	■■■■□ 3.32
HGNC:18790-208	ENST00000506380	MRC2	Q9UBG0	1479 aa		35.76	■■■■□ 3.32
HGNC:18790-208	ENST00000506380	CEP164	Q9UPV0	1460 aa		35.75	■■■■□ 3.31
HGNC:18790-208	ENST00000506380	WDR62	O43379	1518 aa		35.67	■■■■□ 3.3
HGNC:18790-208	ENST00000506380	PRDM2	Q13029	1718 aa		35.66	■■■■□ 3.3
HGNC:18790-208	ENST00000506380	SUPT5H	O00267	1087 aa	Known RBP	35.59	■■■■□ 3.29
HGNC:18790-208	ENST00000506380	URB2	Q14146	1524 aa	Known RBP	35.52	■■■■□ 3.28
HGNC:18790-208	ENST00000506380	DNAJC5	Q9H3Z4	198 aa		35.28	■■■■□ 3.24
HGNC:18790-208	ENST00000506380	TOPBP1	Q92547	1522 aa		35.23	■■■■□ 3.23
HGNC:18790-208	ENST00000506380	DNMBP	Q6XZF7	1577 aa		35.13	■■■■□ 3.21
HGNC:18790-208	ENST00000506380	ABCC8	Q09428	1581 aa		35.05	■■■■□ 3.2
HGNC:18790-208	ENST00000506380	IFT140	Q96RY7	1462 aa		34.99	■■■■□ 3.19
HGNC:18790-208	ENST00000506380	ZNF608	Q9ULD9	1512 aa	Predicted RBP	34.99	■■■■□ 3.19
HGNC:18790-208	ENST00000506380	POLA1	P09884	1462 aa	Predicted RBP	34.92	■■■■□ 3.18
HGNC:18790-208	ENST00000506380	CUX1	P39880	1505 aa		34.91	■■■■□ 3.18
HGNC:18790-208	ENST00000506380	TARBP1	Q13395	1621 aa	Known RBP	34.88	■■■■□ 3.17
HGNC:18790-208	ENST00000506380	RAD54L2	Q9Y4B4	1467 aa		34.83	■■■■□ 3.17
HGNC:18790-208	ENST00000506380	FGD5	Q6ZNL6	1462 aa		34.81	■■■■□ 3.16
HGNC:18790-208	ENST00000506380	EIF4G3	O43432	1585 aa	Known RBP	34.8	■■■■□ 3.16
HGNC:18790-208	ENST00000506380	AQR	O60306	1485 aa	Known RBP eCLIP	34.74	■■■■□ 3.15
HGNC:18790-208	ENST00000506380	SOGA1	O94964	1423 aa		34.72	■■■■□ 3.15
HGNC:18790-208	ENST00000506380	TDRD9	Q8NDG6	1382 aa	Known RBP	34.62	■■■■□ 3.13
HGNC:18790-208	ENST00000506380	SYNJ1	O43426	1573 aa		34.56	■■■■□ 3.12
HGNC:18790-208	ENST00000506380	WDR97	A6NE52	1622 aa		34.55	■■■■□ 3.12
HGNC:18790-208	ENST00000506380	OSCAR	Q8IYS5	282 aa		34.53	■■■■□ 3.12
HGNC:18790-208	ENST00000506380	WRN	Q14191	1432 aa	Predicted RBP eCLIP	34.53	■■■■□ 3.12
HGNC:18790-208	ENST00000506380	BIVM-ERCC5	R4GMW8	1640 aa		34.51	■■■■□ 3.11
HGNC:18790-208	ENST00000506380	TOP2B	Q02880	1626 aa		34.49	■■■■□ 3.11
HGNC:18790-208	ENST00000506380	CHD1	O14646	1710 aa		34.44	■■■■□ 3.1
HGNC:18790-208	ENST00000506380	ABCA10	Q8WWZ4	1543 aa		34.4	■■■■□ 3.1
HGNC:18790-208	ENST00000506380	SNAPC4	Q5SXM2	1469 aa		34.39	■■■■□ 3.1
HGNC:18790-208	ENST00000506380	ABCA5	Q8WWZ7	1642 aa		34.34	■■■■□ 3.09
HGNC:18790-208	ENST00000506380	GRIN2B	Q13224	1484 aa		34.33	■■■■□ 3.09
HGNC:18790-208	ENST00000506380	PBRM1	Q86U86	1689 aa		34.32	■■■■□ 3.08
HGNC:18790-208	ENST00000506380	GAPVD1	Q14C86	1478 aa		34.32	■■■■□ 3.08
HGNC:18790-208	ENST00000506380	FBLN2	P98095	1184 aa		34.31	■■■■□ 3.08
HGNC:18790-208	ENST00000506380	MAGI1	Q96QZ7	1491 aa	Predicted RBP	34.25	■■■■□ 3.07
HGNC:18790-208	ENST00000506380	SYNJ2	O15056	1496 aa		34.14	■■■■□ 3.06
HGNC:18790-208	ENST00000506380	CHMP7	Q8WUX9	453 aa	Predicted RBP	34.13	■■■■□ 3.05
HGNC:18790-208	ENST00000506380	RIMBP3C	A6NJZ7	1639 aa		34.12	■■■■□ 3.05
HGNC:18790-208	ENST00000506380	RIMBP3B	A6NNM3	1639 aa		34.12	■■■■□ 3.05
HGNC:18790-208	ENST00000506380	RIMBP3	Q9UFD9	1639 aa		34.12	■■■■□ 3.05
HGNC:18790-208	ENST00000506380	TRIM41	Q8WV44	630 aa		34.1	■■■■□ 3.05
HGNC:18790-208	ENST00000506380	ARHGEF11	O15085	1522 aa		34.06	■■■■□ 3.04
HGNC:18790-208	ENST00000506380	ADAMTS12	P58397	1594 aa		34.03	■■■■□ 3.04
HGNC:18790-208	ENST00000506380	CLASP1	Q7Z460	1538 aa		34.02	■■■■□ 3.04
HGNC:18790-208	ENST00000506380	ERICH3	Q5RHP9	1530 aa		33.96	■■■■□ 3.03
HGNC:18790-208	ENST00000506380	GRIN2A	Q12879	1464 aa		33.92	■■■■□ 3.02
HGNC:18790-208	ENST00000506380	FHAD1	B1AJZ9	1412 aa		33.89	■■■■□ 3.02
HGNC:18790-208	ENST00000506380	CEP170	Q5SW79	1584 aa		33.84	■■■■□ 3.01
HGNC:18790-208	ENST00000506380	ARAP1	Q96P48	1450 aa		33.81	■■■■□ 3
HGNC:18790-208	ENST00000506380	NUP160	Q12769	1436 aa		33.78	■■■■□ 3
HGNC:18790-208	ENST00000506380	KIF27	Q86VH2	1401 aa		33.78	■■■■□ 3
HGNC:18790-208	ENST00000506380	CYB5RL	Q6IPT4	315 aa		33.75	■■■□□ 2.99
HGNC:18790-208	ENST00000506380	IGF1R	P08069	1367 aa		33.74	■■■□□ 2.99
HGNC:18790-208	ENST00000506380	ERCC6L2	Q5T890	1561 aa		33.64	■■■□□ 2.98
HGNC:18790-208	ENST00000506380	CUL7	Q14999	1698 aa		33.61	■■■□□ 2.97
HGNC:18790-208	ENST00000506380	RUSC2	Q8N2Y8	1516 aa		33.6	■■■□□ 2.97
HGNC:18790-208	ENST00000506380	SHROOM2	Q13796	1616 aa		33.57	■■■□□ 2.97
HGNC:18790-208	ENST00000506380	CARMIL1	Q5VZK9	1371 aa		33.5	■■■□□ 2.95

Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms