RNA–Protein interactions for RNA: ENST00000393381.2

HPF1-201, Transcript of histone PARylation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPF1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1-201ENST00000393381 NISCHQ9Y2I1 1504 aa48.56■■■■■ 5.36
HPF1-201ENST00000393381 ABCC9O60706 1549 aa44.04■■■■■ 4.64
HPF1-201ENST00000393381 CCDC180Q9P1Z9 1646 aa43.7■■■■■ 4.59
HPF1-201ENST00000393381 RB1CC1Q8TDY2 1594 aa41.77■■■■■ 4.28
HPF1-201ENST00000393381 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
HPF1-201ENST00000393381 NACADO15069 1562 aa41.42■■■■■ 4.22
HPF1-201ENST00000393381 DCAF8L2P0C7V8 631 aa41.18■■■■■ 4.18
HPF1-201ENST00000393381 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
HPF1-201ENST00000393381 UNC13AQ9UPW8 1703 aa40.86■■■■■ 4.13
HPF1-201ENST00000393381 MYO15BQ96JP2 1530 aa40.75■■■■■ 4.11
HPF1-201ENST00000393381 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
HPF1-201ENST00000393381 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.02
HPF1-201ENST00000393381 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
HPF1-201ENST00000393381 SHROOM4Q9ULL8 1493 aa39.97■■■■□ 3.99
HPF1-201ENST00000393381 CC2D2AQ9P2K1 1620 aa39.77■■■■□ 3.96
HPF1-201ENST00000393381 SCRIBQ14160 1630 aa39.76■■■■□ 3.96
HPF1-201ENST00000393381 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
HPF1-201ENST00000393381 EIF4G1Q04637 1599 aaKnown RBP39.6■■■■□ 3.93
HPF1-201ENST00000393381 DNAJC5Q9H3Z4 198 aa38.55■■■■□ 3.76
HPF1-201ENST00000393381 NCAPD3P42695 1498 aa38.27■■■■□ 3.72
HPF1-201ENST00000393381 CUX2O14529 1486 aa38.1■■■■□ 3.69
HPF1-201ENST00000393381 ATAD2BQ9ULI0 1458 aa38.08■■■■□ 3.69
HPF1-201ENST00000393381 ERCC6Q03468 1493 aa38.03■■■■□ 3.68
HPF1-201ENST00000393381 SMARCA4P51532 1647 aa37.94■■■■□ 3.66
HPF1-201ENST00000393381 SMARCA2P51531 1590 aa37.93■■■■□ 3.66
HPF1-201ENST00000393381 HMGXB3Q12766 1538 aa37.9■■■■□ 3.66
HPF1-201ENST00000393381 NESP48681 1621 aa37.74■■■■□ 3.63
HPF1-201ENST00000393381 BAZ1AQ9NRL2 1556 aaPredicted RBP37.7■■■■□ 3.63
HPF1-201ENST00000393381 BAZ1BQ9UIG0 1483 aaKnown RBP37.66■■■■□ 3.62
HPF1-201ENST00000393381 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
HPF1-201ENST00000393381 LAMC3Q9Y6N6 1575 aa37.43■■■■□ 3.58
HPF1-201ENST00000393381 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
HPF1-201ENST00000393381 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
HPF1-201ENST00000393381 PDS5BQ9NTI5 1447 aa37.24■■■■□ 3.55
HPF1-201ENST00000393381 KIF21AQ7Z4S6 1674 aa37.24■■■■□ 3.55
HPF1-201ENST00000393381 CADPSQ9ULU8 1353 aa37.08■■■■□ 3.53
HPF1-201ENST00000393381 WIZO95785 1651 aa36.95■■■■□ 3.51
HPF1-201ENST00000393381 MRC2Q9UBG0 1479 aa36.9■■■■□ 3.5
HPF1-201ENST00000393381 WDR62O43379 1518 aa36.83■■■■□ 3.49
HPF1-201ENST00000393381 CEP164Q9UPV0 1460 aa36.69■■■■□ 3.46
HPF1-201ENST00000393381 TRIM41Q8WV44 630 aa36.66■■■■□ 3.46
HPF1-201ENST00000393381 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
HPF1-201ENST00000393381 CFTRP13569 1480 aa36.58■■■■□ 3.45
HPF1-201ENST00000393381 RSF1Q96T23 1441 aaPredicted RBP36.52■■■■□ 3.44
HPF1-201ENST00000393381 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
HPF1-201ENST00000393381 OSCARQ8IYS5 282 aa36.38■■■■□ 3.41
HPF1-201ENST00000393381 URB2Q14146 1524 aaKnown RBP36.35■■■■□ 3.41
HPF1-201ENST00000393381 PRDM2Q13029 1718 aa36.17■■■■□ 3.38
HPF1-201ENST00000393381 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
HPF1-201ENST00000393381 IFT140Q96RY7 1462 aa35.98■■■■□ 3.35
HPF1-201ENST00000393381 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
HPF1-201ENST00000393381 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
HPF1-201ENST00000393381 RIMBP3CA6NJZ7 1639 aa35.87■■■■□ 3.33
HPF1-201ENST00000393381 RIMBP3BA6NNM3 1639 aa35.87■■■■□ 3.33
HPF1-201ENST00000393381 RIMBP3Q9UFD9 1639 aa35.87■■■■□ 3.33
HPF1-201ENST00000393381 ABCC8Q09428 1581 aa35.84■■■■□ 3.33
HPF1-201ENST00000393381 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
HPF1-201ENST00000393381 ARHGEF11O15085 1522 aa35.71■■■■□ 3.31
HPF1-201ENST00000393381 EIF4G3O43432 1585 aaKnown RBP35.71■■■■□ 3.31
HPF1-201ENST00000393381 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
HPF1-201ENST00000393381 AQRO60306 1485 aaKnown RBP eCLIP35.61■■■■□ 3.29
HPF1-201ENST00000393381 CHD1O14646 1710 aa35.54■■■■□ 3.28
HPF1-201ENST00000393381 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
HPF1-201ENST00000393381 POLA1P09884 1462 aaPredicted RBP35.51■■■■□ 3.28
HPF1-201ENST00000393381 FBLN2P98095 1184 aa35.45■■■■□ 3.27
HPF1-201ENST00000393381 RAD54L2Q9Y4B4 1467 aa35.4■■■■□ 3.26
HPF1-201ENST00000393381 SOGA1O94964 1423 aa35.38■■■■□ 3.25
HPF1-201ENST00000393381 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
HPF1-201ENST00000393381 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
HPF1-201ENST00000393381 FGD5Q6ZNL6 1462 aa35.23■■■■□ 3.23
HPF1-201ENST00000393381 TRHP20396 242 aaPredicted RBP35.23■■■■□ 3.23
HPF1-201ENST00000393381 WDR97A6NE52 1622 aa35.22■■■■□ 3.23
HPF1-201ENST00000393381 SNAPC4Q5SXM2 1469 aa35.19■■■■□ 3.22
HPF1-201ENST00000393381 CHMP7Q8WUX9 453 aaPredicted RBP35.16■■■■□ 3.22
HPF1-201ENST00000393381 CUX1P39880 1505 aa35.15■■■■□ 3.22
HPF1-201ENST00000393381 CLASP1Q7Z460 1538 aa35.11■■■■□ 3.21
HPF1-201ENST00000393381 MAGI1Q96QZ7 1491 aaPredicted RBP35.11■■■■□ 3.21
HPF1-201ENST00000393381 GRIN2BQ13224 1484 aa35.08■■■■□ 3.21
HPF1-201ENST00000393381 SYNJ1O43426 1573 aa35.07■■■■□ 3.2
HPF1-201ENST00000393381 SYNJ2O15056 1496 aa35■■■■□ 3.19
HPF1-201ENST00000393381 GAPVD1Q14C86 1478 aa34.92■■■■□ 3.18
HPF1-201ENST00000393381 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
HPF1-201ENST00000393381 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
HPF1-201ENST00000393381 ABCA5Q8WWZ7 1642 aa34.78■■■■□ 3.16
HPF1-201ENST00000393381 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
HPF1-201ENST00000393381 WRNQ14191 1432 aaPredicted RBP eCLIP34.63■■■■□ 3.13
HPF1-201ENST00000393381 GRIN2AQ12879 1464 aa34.62■■■■□ 3.13
HPF1-201ENST00000393381 ERCC6L2Q5T890 1561 aa34.55■■■■□ 3.12
HPF1-201ENST00000393381 NUP160Q12769 1436 aa34.53■■■■□ 3.12
HPF1-201ENST00000393381 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
HPF1-201ENST00000393381 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
HPF1-201ENST00000393381 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
HPF1-201ENST00000393381 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
HPF1-201ENST00000393381 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
HPF1-201ENST00000393381 AEBP2Q6ZN18 517 aaPredicted RBP34.46■■■■□ 3.11
HPF1-201ENST00000393381 SHROOM2Q13796 1616 aa34.41■■■■□ 3.1
HPF1-201ENST00000393381 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
HPF1-201ENST00000393381 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
HPF1-201ENST00000393381 PRG4Q92954 1404 aaPredicted RBP34.23■■■■□ 3.07
HPF1-201ENST00000393381 KIF13AQ9H1H9 1805 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms