RNA–Protein interactions for RNA: ENST00000379134.7

USF2-203, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-203ENST00000379134 NISCHQ9Y2I1 1504 aa48.28■■■■■ 5.32
USF2-203ENST00000379134 CCDC180Q9P1Z9 1646 aa43.27■■■■■ 4.52
USF2-203ENST00000379134 ABCC9O60706 1549 aa43.13■■■■■ 4.5
USF2-203ENST00000379134 RB1CC1Q8TDY2 1594 aa41.09■■■■■ 4.17
USF2-203ENST00000379134 NACADO15069 1562 aa40.82■■■■■ 4.12
USF2-203ENST00000379134 DCAF8L2P0C7V8 631 aa40.81■■■■■ 4.12
USF2-203ENST00000379134 UNC13AQ9UPW8 1703 aa40.27■■■■■ 4.04
USF2-203ENST00000379134 MYO15BQ96JP2 1530 aa40.23■■■■■ 4.03
USF2-203ENST00000379134 DNAJC5BQ9UF47 199 aa40.19■■■■■ 4.02
USF2-203ENST00000379134 PABPN1Q86U42 306 aaKnown RBP eCLIP40.18■■■■■ 4.02
USF2-203ENST00000379134 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4
USF2-203ENST00000379134 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
USF2-203ENST00000379134 DCAF1Q9Y4B6 1507 aa39.82■■■■□ 3.97
USF2-203ENST00000379134 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
USF2-203ENST00000379134 SHROOM4Q9ULL8 1493 aa39.25■■■■□ 3.87
USF2-203ENST00000379134 CC2D2AQ9P2K1 1620 aa38.96■■■■□ 3.83
USF2-203ENST00000379134 EIF4G1Q04637 1599 aaKnown RBP38.89■■■■□ 3.82
USF2-203ENST00000379134 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
USF2-203ENST00000379134 SMARCA4P51532 1647 aa37.68■■■■□ 3.62
USF2-203ENST00000379134 NCAPD3P42695 1498 aa37.64■■■■□ 3.62
USF2-203ENST00000379134 ATAD2BQ9ULI0 1458 aa37.6■■■■□ 3.61
USF2-203ENST00000379134 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
USF2-203ENST00000379134 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
USF2-203ENST00000379134 HMGXB3Q12766 1538 aa37.43■■■■□ 3.58
USF2-203ENST00000379134 BAZ1BQ9UIG0 1483 aaKnown RBP37.3■■■■□ 3.56
USF2-203ENST00000379134 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
USF2-203ENST00000379134 ERCC6Q03468 1493 aa37.23■■■■□ 3.55
USF2-203ENST00000379134 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
USF2-203ENST00000379134 NESP48681 1621 aa37.1■■■■□ 3.53
USF2-203ENST00000379134 CUX2O14529 1486 aa36.99■■■■□ 3.51
USF2-203ENST00000379134 WIZO95785 1651 aa36.87■■■■□ 3.49
USF2-203ENST00000379134 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
USF2-203ENST00000379134 DNAJC5Q9H3Z4 198 aa36.71■■■■□ 3.47
USF2-203ENST00000379134 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
USF2-203ENST00000379134 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
USF2-203ENST00000379134 PDS5BQ9NTI5 1447 aa36.58■■■■□ 3.45
USF2-203ENST00000379134 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
USF2-203ENST00000379134 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.43
USF2-203ENST00000379134 TOP2AP11388 1531 aaKnown RBP36.35■■■■□ 3.41
USF2-203ENST00000379134 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
USF2-203ENST00000379134 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
USF2-203ENST00000379134 WDR62O43379 1518 aa36.18■■■■□ 3.38
USF2-203ENST00000379134 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
USF2-203ENST00000379134 CFTRP13569 1480 aa36.16■■■■□ 3.38
USF2-203ENST00000379134 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
USF2-203ENST00000379134 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
USF2-203ENST00000379134 URB2Q14146 1524 aaKnown RBP35.87■■■■□ 3.33
USF2-203ENST00000379134 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
USF2-203ENST00000379134 IFT140Q96RY7 1462 aa35.43■■■■□ 3.26
USF2-203ENST00000379134 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
USF2-203ENST00000379134 ZNF608Q9ULD9 1512 aaPredicted RBP35.41■■■■□ 3.26
USF2-203ENST00000379134 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
USF2-203ENST00000379134 OSCARQ8IYS5 282 aa35.35■■■■□ 3.25
USF2-203ENST00000379134 TRIM41Q8WV44 630 aa35.35■■■■□ 3.25
USF2-203ENST00000379134 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
USF2-203ENST00000379134 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
USF2-203ENST00000379134 TARBP1Q13395 1621 aaKnown RBP35.17■■■■□ 3.22
USF2-203ENST00000379134 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
USF2-203ENST00000379134 AQRO60306 1485 aaKnown RBP eCLIP35.1■■■■□ 3.211e-7■■■■□ 23
USF2-203ENST00000379134 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
USF2-203ENST00000379134 CHD1O14646 1710 aa35.01■■■■□ 3.19
USF2-203ENST00000379134 SOGA1O94964 1423 aa35■■■■□ 3.19
USF2-203ENST00000379134 FGD5Q6ZNL6 1462 aa35■■■■□ 3.19
USF2-203ENST00000379134 CUX1P39880 1505 aa34.99■■■■□ 3.19
USF2-203ENST00000379134 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.18
USF2-203ENST00000379134 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.18
USF2-203ENST00000379134 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.18
USF2-203ENST00000379134 TDRD9Q8NDG6 1382 aaKnown RBP34.93■■■■□ 3.18
USF2-203ENST00000379134 FBLN2P98095 1184 aa34.9■■■■□ 3.18
USF2-203ENST00000379134 ARHGEF11O15085 1522 aa34.82■■■■□ 3.16
USF2-203ENST00000379134 WDR97A6NE52 1622 aa34.77■■■■□ 3.16
USF2-203ENST00000379134 SNAPC4Q5SXM2 1469 aa34.77■■■■□ 3.16
USF2-203ENST00000379134 GRIN2BQ13224 1484 aa34.66■■■■□ 3.14
USF2-203ENST00000379134 PBRM1Q86U86 1689 aa34.65■■■■□ 3.14
USF2-203ENST00000379134 MAGI1Q96QZ7 1491 aaPredicted RBP34.64■■■■□ 3.14
USF2-203ENST00000379134 CHMP7Q8WUX9 453 aaPredicted RBP34.61■■■■□ 3.13
USF2-203ENST00000379134 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
USF2-203ENST00000379134 CYB5RLQ6IPT4 315 aa34.57■■■■□ 3.12
USF2-203ENST00000379134 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
USF2-203ENST00000379134 ABCA5Q8WWZ7 1642 aa34.53■■■■□ 3.12
USF2-203ENST00000379134 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
USF2-203ENST00000379134 SYNJ2O15056 1496 aa34.52■■■■□ 3.12
USF2-203ENST00000379134 BIVM-ERCC5R4GMW8 1640 aa34.49■■■■□ 3.11
USF2-203ENST00000379134 ARAP1Q96P48 1450 aa34.49■■■■□ 3.11
USF2-203ENST00000379134 CLASP1Q7Z460 1538 aa34.49■■■■□ 3.11
USF2-203ENST00000379134 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
USF2-203ENST00000379134 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
USF2-203ENST00000379134 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
USF2-203ENST00000379134 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
USF2-203ENST00000379134 TRHP20396 242 aaPredicted RBP34.17■■■■□ 3.06
USF2-203ENST00000379134 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
USF2-203ENST00000379134 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
USF2-203ENST00000379134 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
USF2-203ENST00000379134 NUP160Q12769 1436 aa34.06■■■■□ 3.04
USF2-203ENST00000379134 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
USF2-203ENST00000379134 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
USF2-203ENST00000379134 KIF27Q86VH2 1401 aa33.79■■■■□ 3
USF2-203ENST00000379134 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
USF2-203ENST00000379134 PRG4Q92954 1404 aaPredicted RBP33.78■■■■□ 3
USF2-203ENST00000379134 JPH4Q96JJ6 628 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms