RNA–Protein interactions for RNA: ENST00000339098.9

CERKL-201, Transcript of ceramide kinase like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CERKL, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-201ENST00000339098 NISCHQ9Y2I1 1504 aa48.06■■■■■ 5.28
CERKL-201ENST00000339098 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
CERKL-201ENST00000339098 ABCC9O60706 1549 aa40.81■■■■■ 4.12
CERKL-201ENST00000339098 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
CERKL-201ENST00000339098 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
CERKL-201ENST00000339098 DCAF1Q9Y4B6 1507 aa39.79■■■■□ 3.96
CERKL-201ENST00000339098 NACADO15069 1562 aa39.7■■■■□ 3.95
CERKL-201ENST00000339098 MYO15BQ96JP2 1530 aa39.69■■■■□ 3.94
CERKL-201ENST00000339098 RB1CC1Q8TDY2 1594 aa39.56■■■■□ 3.92
CERKL-201ENST00000339098 SCRIBQ14160 1630 aa38.76■■■■□ 3.79
CERKL-201ENST00000339098 UNC13AQ9UPW8 1703 aa38.75■■■■□ 3.79
CERKL-201ENST00000339098 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
CERKL-201ENST00000339098 BICRAQ9NZM4 1560 aa38.38■■■■□ 3.74
CERKL-201ENST00000339098 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
CERKL-201ENST00000339098 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
CERKL-201ENST00000339098 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
CERKL-201ENST00000339098 BAZ1AQ9NRL2 1556 aaPredicted RBP37.19■■■■□ 3.54
CERKL-201ENST00000339098 SMARCA4P51532 1647 aa37.15■■■■□ 3.54
CERKL-201ENST00000339098 MROH2BQ7Z745 1585 aa37.07■■■■□ 3.52
CERKL-201ENST00000339098 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
CERKL-201ENST00000339098 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
CERKL-201ENST00000339098 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
CERKL-201ENST00000339098 PEG3Q9GZU2 1588 aa36.78■■■■□ 3.48
CERKL-201ENST00000339098 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
CERKL-201ENST00000339098 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
CERKL-201ENST00000339098 WIZO95785 1651 aa36.72■■■■□ 3.47
CERKL-201ENST00000339098 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
CERKL-201ENST00000339098 HMGXB3Q12766 1538 aa36.51■■■■□ 3.44
CERKL-201ENST00000339098 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
CERKL-201ENST00000339098 BAZ1BQ9UIG0 1483 aaKnown RBP36.49■■■■□ 3.43
CERKL-201ENST00000339098 TOP2AP11388 1531 aaKnown RBP36.33■■■■□ 3.41
CERKL-201ENST00000339098 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
CERKL-201ENST00000339098 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
CERKL-201ENST00000339098 NESP48681 1621 aa35.55■■■■□ 3.28
CERKL-201ENST00000339098 CFTRP13569 1480 aa35.54■■■■□ 3.28
CERKL-201ENST00000339098 LAMC3Q9Y6N6 1575 aa35.54■■■■□ 3.28
CERKL-201ENST00000339098 PRDM2Q13029 1718 aa35.36■■■■□ 3.25
CERKL-201ENST00000339098 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.23
CERKL-201ENST00000339098 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
CERKL-201ENST00000339098 KIF21AQ7Z4S6 1674 aa35.16■■■■□ 3.22
CERKL-201ENST00000339098 ERCC6Q03468 1493 aa35.1■■■■□ 3.21
CERKL-201ENST00000339098 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
CERKL-201ENST00000339098 MRC2Q9UBG0 1479 aa34.86■■■■□ 3.17
CERKL-201ENST00000339098 THOC2Q8NI27 1593 aaKnown RBP34.85■■■■□ 3.17
CERKL-201ENST00000339098 ABCC8Q09428 1581 aa34.84■■■■□ 3.17
CERKL-201ENST00000339098 URB2Q14146 1524 aaKnown RBP34.81■■■■□ 3.16
CERKL-201ENST00000339098 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
CERKL-201ENST00000339098 WDR62O43379 1518 aa34.74■■■■□ 3.15
CERKL-201ENST00000339098 CUX1P39880 1505 aa34.73■■■■□ 3.15
CERKL-201ENST00000339098 DNMBPQ6XZF7 1577 aa34.72■■■■□ 3.15
CERKL-201ENST00000339098 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
CERKL-201ENST00000339098 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
CERKL-201ENST00000339098 TOP2BQ02880 1626 aa34.62■■■■□ 3.13
CERKL-201ENST00000339098 BIVM-ERCC5R4GMW8 1640 aa34.61■■■■□ 3.13
CERKL-201ENST00000339098 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
CERKL-201ENST00000339098 FGD5Q6ZNL6 1462 aa34.48■■■■□ 3.11
CERKL-201ENST00000339098 CUX2O14529 1486 aa34.47■■■■□ 3.11
CERKL-201ENST00000339098 POLA1P09884 1462 aaPredicted RBP34.47■■■■□ 3.11
CERKL-201ENST00000339098 TRIM41Q8WV44 630 aa34.43■■■■□ 3.1
CERKL-201ENST00000339098 SOGA1O94964 1423 aa34.33■■■■□ 3.09
CERKL-201ENST00000339098 RAD54L2Q9Y4B4 1467 aa34.31■■■■□ 3.08
CERKL-201ENST00000339098 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
CERKL-201ENST00000339098 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
CERKL-201ENST00000339098 ABCA10Q8WWZ4 1543 aa34.19■■■■□ 3.06
CERKL-201ENST00000339098 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
CERKL-201ENST00000339098 ZNF608Q9ULD9 1512 aaPredicted RBP34.11■■■■□ 3.05
CERKL-201ENST00000339098 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
CERKL-201ENST00000339098 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.04
CERKL-201ENST00000339098 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
CERKL-201ENST00000339098 ABCA5Q8WWZ7 1642 aa34■■■■□ 3.03
CERKL-201ENST00000339098 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
CERKL-201ENST00000339098 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
CERKL-201ENST00000339098 RUSC2Q8N2Y8 1516 aa33.91■■■■□ 3.02
CERKL-201ENST00000339098 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
CERKL-201ENST00000339098 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
CERKL-201ENST00000339098 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
CERKL-201ENST00000339098 EEA1Q15075 1411 aa33.77■■■■□ 3
CERKL-201ENST00000339098 IGF1RP08069 1367 aa33.76■■■□□ 2.99
CERKL-201ENST00000339098 FAM9AQ8IZU1 332 aaPredicted RBP33.71■■■□□ 2.99
CERKL-201ENST00000339098 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
CERKL-201ENST00000339098 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
CERKL-201ENST00000339098 CSRNP3Q8WYN3 585 aa33.65■■■□□ 2.98
CERKL-201ENST00000339098 CUL7Q14999 1698 aa33.61■■■□□ 2.97
CERKL-201ENST00000339098 ADAMTS12P58397 1594 aa33.6■■■□□ 2.97
CERKL-201ENST00000339098 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
CERKL-201ENST00000339098 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
CERKL-201ENST00000339098 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
CERKL-201ENST00000339098 PRXQ9BXM0 1461 aa33.51■■■□□ 2.96
CERKL-201ENST00000339098 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
CERKL-201ENST00000339098 CHD1O14646 1710 aa33.46■■■□□ 2.95
CERKL-201ENST00000339098 FBLN2P98095 1184 aa33.45■■■□□ 2.94
CERKL-201ENST00000339098 RAPGEF2Q9Y4G8 1499 aa33.44■■■□□ 2.94
CERKL-201ENST00000339098 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
CERKL-201ENST00000339098 KIF21BO75037 1637 aa33.4■■■□□ 2.94
CERKL-201ENST00000339098 GOLGA3Q08378 1498 aa33.24■■■□□ 2.91
CERKL-201ENST00000339098 NUP160Q12769 1436 aa33.24■■■□□ 2.91
CERKL-201ENST00000339098 CEP170Q5SW79 1584 aa33.23■■■□□ 2.91
CERKL-201ENST00000339098 EHMT2Q96KQ7 1210 aa33.21■■■□□ 2.91
CERKL-201ENST00000339098 OSCARQ8IYS5 282 aa33.2■■■□□ 2.9
CERKL-201ENST00000339098 CTTNBP2Q8WZ74 1663 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms