RNA–Protein interactions for RNA: ENST00000616441.2

PTCRA-204, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTCRA, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-204ENST00000616441 NISCHQ9Y2I1 1504 aa48.24■■■■■ 5.31
PTCRA-204ENST00000616441 ABCC9O60706 1549 aa43.54■■■■■ 4.56
PTCRA-204ENST00000616441 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
PTCRA-204ENST00000616441 DNAJC5BQ9UF47 199 aa41.54■■■■■ 4.24
PTCRA-204ENST00000616441 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
PTCRA-204ENST00000616441 NACADO15069 1562 aa40.72■■■■■ 4.11
PTCRA-204ENST00000616441 DCAF8L2P0C7V8 631 aa40.63■■■■■ 4.09
PTCRA-204ENST00000616441 PABPN1Q86U42 306 aaKnown RBP eCLIP40.6■■■■■ 4.09
PTCRA-204ENST00000616441 ZCCHC6Q5VYS8 1495 aaKnown RBP40.24■■■■■ 4.03
PTCRA-204ENST00000616441 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
PTCRA-204ENST00000616441 MYO15BQ96JP2 1530 aa40.02■■■■■ 4
PTCRA-204ENST00000616441 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
PTCRA-204ENST00000616441 DCAF1Q9Y4B6 1507 aa39.94■■■■□ 3.98
PTCRA-204ENST00000616441 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
PTCRA-204ENST00000616441 CECR2Q9BXF3 1484 aa39.28■■■■□ 3.88
PTCRA-204ENST00000616441 CC2D2AQ9P2K1 1620 aa39.23■■■■□ 3.87
PTCRA-204ENST00000616441 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
PTCRA-204ENST00000616441 EIF4G1Q04637 1599 aaKnown RBP39.03■■■■□ 3.84
PTCRA-204ENST00000616441 DNAJC5Q9H3Z4 198 aa38.46■■■■□ 3.75
PTCRA-204ENST00000616441 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
PTCRA-204ENST00000616441 CUX2O14529 1486 aa37.67■■■■□ 3.62
PTCRA-204ENST00000616441 ERCC6Q03468 1493 aa37.57■■■■□ 3.6
PTCRA-204ENST00000616441 ATAD2BQ9ULI0 1458 aa37.52■■■■□ 3.6
PTCRA-204ENST00000616441 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
PTCRA-204ENST00000616441 SMARCA4P51532 1647 aa37.34■■■■□ 3.57
PTCRA-204ENST00000616441 NESP48681 1621 aa37.28■■■■□ 3.56
PTCRA-204ENST00000616441 SMARCA2P51531 1590 aa37.26■■■■□ 3.56
PTCRA-204ENST00000616441 HMGXB3Q12766 1538 aa37.24■■■■□ 3.55
PTCRA-204ENST00000616441 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
PTCRA-204ENST00000616441 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
PTCRA-204ENST00000616441 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
PTCRA-204ENST00000616441 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
PTCRA-204ENST00000616441 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
PTCRA-204ENST00000616441 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
PTCRA-204ENST00000616441 WIZO95785 1651 aa36.74■■■■□ 3.47
PTCRA-204ENST00000616441 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
PTCRA-204ENST00000616441 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
PTCRA-204ENST00000616441 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
PTCRA-204ENST00000616441 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
PTCRA-204ENST00000616441 TOP2AP11388 1531 aaKnown RBP36.41■■■■□ 3.42
PTCRA-204ENST00000616441 MRC2Q9UBG0 1479 aa36.38■■■■□ 3.41
PTCRA-204ENST00000616441 WDR62O43379 1518 aa36.28■■■■□ 3.4
PTCRA-204ENST00000616441 SUPT5HO00267 1087 aaKnown RBP36.12■■■■□ 3.37
PTCRA-204ENST00000616441 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
PTCRA-204ENST00000616441 FANCD2Q9BXW9 1451 aa36.08■■■■□ 3.37
PTCRA-204ENST00000616441 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
PTCRA-204ENST00000616441 CFTRP13569 1480 aa36■■■■□ 3.35
PTCRA-204ENST00000616441 CCDC88BA6NC98 1476 aa35.99■■■■□ 3.35
PTCRA-204ENST00000616441 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
PTCRA-204ENST00000616441 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
PTCRA-204ENST00000616441 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
PTCRA-204ENST00000616441 IFT140Q96RY7 1462 aa35.45■■■■□ 3.27
PTCRA-204ENST00000616441 RIMBP3CA6NJZ7 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 RIMBP3BA6NNM3 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 RIMBP3Q9UFD9 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
PTCRA-204ENST00000616441 ARHGEF11O15085 1522 aa35.32■■■■□ 3.24
PTCRA-204ENST00000616441 CYB5RLQ6IPT4 315 aa35.26■■■■□ 3.24
PTCRA-204ENST00000616441 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
PTCRA-204ENST00000616441 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.22
PTCRA-204ENST00000616441 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
PTCRA-204ENST00000616441 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
PTCRA-204ENST00000616441 FBLN2P98095 1184 aa35.05■■■■□ 3.2
PTCRA-204ENST00000616441 TARBP1Q13395 1621 aaKnown RBP35.01■■■■□ 3.19
PTCRA-204ENST00000616441 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
PTCRA-204ENST00000616441 TRHP20396 242 aaPredicted RBP34.96■■■■□ 3.19
PTCRA-204ENST00000616441 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
PTCRA-204ENST00000616441 CHD1O14646 1710 aa34.89■■■■□ 3.18
PTCRA-204ENST00000616441 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
PTCRA-204ENST00000616441 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
PTCRA-204ENST00000616441 CUX1P39880 1505 aa34.86■■■■□ 3.17
PTCRA-204ENST00000616441 SOGA1O94964 1423 aa34.84■■■■□ 3.17
PTCRA-204ENST00000616441 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
PTCRA-204ENST00000616441 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
PTCRA-204ENST00000616441 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
PTCRA-204ENST00000616441 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
PTCRA-204ENST00000616441 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 TOP2BQ02880 1626 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 SYNJ1O43426 1573 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
PTCRA-204ENST00000616441 MAGI1Q96QZ7 1491 aaPredicted RBP34.54■■■■□ 3.12
PTCRA-204ENST00000616441 GRIN2BQ13224 1484 aa34.53■■■■□ 3.12
PTCRA-204ENST00000616441 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
PTCRA-204ENST00000616441 SYNJ2O15056 1496 aa34.46■■■■□ 3.11
PTCRA-204ENST00000616441 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
PTCRA-204ENST00000616441 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
PTCRA-204ENST00000616441 AEBP2Q6ZN18 517 aaPredicted RBP34.29■■■■□ 3.08
PTCRA-204ENST00000616441 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
PTCRA-204ENST00000616441 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
PTCRA-204ENST00000616441 ERCC6L2Q5T890 1561 aa34.1■■■■□ 3.05
PTCRA-204ENST00000616441 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
PTCRA-204ENST00000616441 NUP160Q12769 1436 aa34.02■■■■□ 3.04
PTCRA-204ENST00000616441 KIF27Q86VH2 1401 aa34.02■■■■□ 3.04
PTCRA-204ENST00000616441 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
PTCRA-204ENST00000616441 CEP170Q5SW79 1584 aa33.95■■■■□ 3.03
PTCRA-204ENST00000616441 ADAMTS12P58397 1594 aa33.93■■■■□ 3.02
PTCRA-204ENST00000616441 FHAD1B1AJZ9 1412 aa33.91■■■■□ 3.02
PTCRA-204ENST00000616441 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
PTCRA-204ENST00000616441 IGF1RP08069 1367 aa33.85■■■■□ 3.01
PTCRA-204ENST00000616441 SHROOM2Q13796 1616 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms