RNA–Protein interactions for RNA: ENST00000616441.2

PTCRA-204, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTCRA, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-204ENST00000616441 NISCHQ9Y2I1 1504 aa48.24■■■■■ 5.31
PTCRA-204ENST00000616441 ABCC9O60706 1549 aa43.54■■■■■ 4.56
PTCRA-204ENST00000616441 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
PTCRA-204ENST00000616441 DNAJC5BQ9UF47 199 aa41.54■■■■■ 4.24
PTCRA-204ENST00000616441 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
PTCRA-204ENST00000616441 NACADO15069 1562 aa40.72■■■■■ 4.11
PTCRA-204ENST00000616441 DCAF8L2P0C7V8 631 aa40.63■■■■■ 4.09
PTCRA-204ENST00000616441 PABPN1Q86U42 306 aaKnown RBP eCLIP40.6■■■■■ 4.09
PTCRA-204ENST00000616441 ZCCHC6Q5VYS8 1495 aaKnown RBP40.24■■■■■ 4.03
PTCRA-204ENST00000616441 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
PTCRA-204ENST00000616441 MYO15BQ96JP2 1530 aa40.02■■■■■ 4
PTCRA-204ENST00000616441 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
PTCRA-204ENST00000616441 DCAF1Q9Y4B6 1507 aa39.94■■■■□ 3.98
PTCRA-204ENST00000616441 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
PTCRA-204ENST00000616441 CECR2Q9BXF3 1484 aa39.28■■■■□ 3.88
PTCRA-204ENST00000616441 CC2D2AQ9P2K1 1620 aa39.23■■■■□ 3.87
PTCRA-204ENST00000616441 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
PTCRA-204ENST00000616441 EIF4G1Q04637 1599 aaKnown RBP39.03■■■■□ 3.84
PTCRA-204ENST00000616441 DNAJC5Q9H3Z4 198 aa38.46■■■■□ 3.75
PTCRA-204ENST00000616441 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
PTCRA-204ENST00000616441 CUX2O14529 1486 aa37.67■■■■□ 3.62
PTCRA-204ENST00000616441 ERCC6Q03468 1493 aa37.57■■■■□ 3.6
PTCRA-204ENST00000616441 ATAD2BQ9ULI0 1458 aa37.52■■■■□ 3.6
PTCRA-204ENST00000616441 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
PTCRA-204ENST00000616441 SMARCA4P51532 1647 aa37.34■■■■□ 3.57
PTCRA-204ENST00000616441 NESP48681 1621 aa37.28■■■■□ 3.56
PTCRA-204ENST00000616441 SMARCA2P51531 1590 aa37.26■■■■□ 3.56
PTCRA-204ENST00000616441 HMGXB3Q12766 1538 aa37.24■■■■□ 3.55
PTCRA-204ENST00000616441 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
PTCRA-204ENST00000616441 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
PTCRA-204ENST00000616441 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
PTCRA-204ENST00000616441 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
PTCRA-204ENST00000616441 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
PTCRA-204ENST00000616441 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
PTCRA-204ENST00000616441 WIZO95785 1651 aa36.74■■■■□ 3.47
PTCRA-204ENST00000616441 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
PTCRA-204ENST00000616441 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
PTCRA-204ENST00000616441 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
PTCRA-204ENST00000616441 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
PTCRA-204ENST00000616441 TOP2AP11388 1531 aaKnown RBP36.41■■■■□ 3.42
PTCRA-204ENST00000616441 MRC2Q9UBG0 1479 aa36.38■■■■□ 3.41
PTCRA-204ENST00000616441 WDR62O43379 1518 aa36.28■■■■□ 3.4
PTCRA-204ENST00000616441 SUPT5HO00267 1087 aaKnown RBP36.12■■■■□ 3.37
PTCRA-204ENST00000616441 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
PTCRA-204ENST00000616441 FANCD2Q9BXW9 1451 aa36.08■■■■□ 3.37
PTCRA-204ENST00000616441 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
PTCRA-204ENST00000616441 CFTRP13569 1480 aa36■■■■□ 3.35
PTCRA-204ENST00000616441 CCDC88BA6NC98 1476 aa35.99■■■■□ 3.35
PTCRA-204ENST00000616441 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
PTCRA-204ENST00000616441 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
PTCRA-204ENST00000616441 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
PTCRA-204ENST00000616441 IFT140Q96RY7 1462 aa35.45■■■■□ 3.27
PTCRA-204ENST00000616441 RIMBP3CA6NJZ7 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 RIMBP3BA6NNM3 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 RIMBP3Q9UFD9 1639 aa35.42■■■■□ 3.26
PTCRA-204ENST00000616441 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
PTCRA-204ENST00000616441 ARHGEF11O15085 1522 aa35.32■■■■□ 3.24
PTCRA-204ENST00000616441 CYB5RLQ6IPT4 315 aa35.26■■■■□ 3.24
PTCRA-204ENST00000616441 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
PTCRA-204ENST00000616441 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.22
PTCRA-204ENST00000616441 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
PTCRA-204ENST00000616441 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
PTCRA-204ENST00000616441 FBLN2P98095 1184 aa35.05■■■■□ 3.2
PTCRA-204ENST00000616441 TARBP1Q13395 1621 aaKnown RBP35.01■■■■□ 3.19
PTCRA-204ENST00000616441 ARAP1Q96P48 1450 aa34.97■■■■□ 3.19
PTCRA-204ENST00000616441 TRHP20396 242 aaPredicted RBP34.96■■■■□ 3.19
PTCRA-204ENST00000616441 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
PTCRA-204ENST00000616441 CHD1O14646 1710 aa34.89■■■■□ 3.18
PTCRA-204ENST00000616441 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
PTCRA-204ENST00000616441 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
PTCRA-204ENST00000616441 CUX1P39880 1505 aa34.86■■■■□ 3.17
PTCRA-204ENST00000616441 SOGA1O94964 1423 aa34.84■■■■□ 3.17
PTCRA-204ENST00000616441 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
PTCRA-204ENST00000616441 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
PTCRA-204ENST00000616441 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
PTCRA-204ENST00000616441 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
PTCRA-204ENST00000616441 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 TOP2BQ02880 1626 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 SYNJ1O43426 1573 aa34.6■■■■□ 3.13
PTCRA-204ENST00000616441 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
PTCRA-204ENST00000616441 MAGI1Q96QZ7 1491 aaPredicted RBP34.54■■■■□ 3.12
PTCRA-204ENST00000616441 GRIN2BQ13224 1484 aa34.53■■■■□ 3.12
PTCRA-204ENST00000616441 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
PTCRA-204ENST00000616441 SYNJ2O15056 1496 aa34.46■■■■□ 3.11
PTCRA-204ENST00000616441 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
PTCRA-204ENST00000616441 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
PTCRA-204ENST00000616441 AEBP2Q6ZN18 517 aaPredicted RBP34.29■■■■□ 3.08
PTCRA-204ENST00000616441 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
PTCRA-204ENST00000616441 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
PTCRA-204ENST00000616441 ERCC6L2Q5T890 1561 aa34.1■■■■□ 3.05
PTCRA-204ENST00000616441 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
PTCRA-204ENST00000616441 NUP160Q12769 1436 aa34.02■■■■□ 3.04
PTCRA-204ENST00000616441 KIF27Q86VH2 1401 aa34.02■■■■□ 3.04
PTCRA-204ENST00000616441 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
PTCRA-204ENST00000616441 CEP170Q5SW79 1584 aa33.95■■■■□ 3.03
PTCRA-204ENST00000616441 ADAMTS12P58397 1594 aa33.93■■■■□ 3.02
PTCRA-204ENST00000616441 FHAD1B1AJZ9 1412 aa33.91■■■■□ 3.02
PTCRA-204ENST00000616441 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
PTCRA-204ENST00000616441 IGF1RP08069 1367 aa33.85■■■■□ 3.01
PTCRA-204ENST00000616441 SHROOM2Q13796 1616 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms