Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YER189WYER189W 369 nt3.71□□□□□ -1.82
PUF3Q07807 RPS8AYBL072C 603 nt3.71□□□□□ -1.82
PUF3Q07807 VPS53YJL029C 2469 nt3.71□□□□□ -1.82
PUF3Q07807 HEF3YNL014W 3135 nt3.71□□□□□ -1.82
PUF3Q07807 SRB4YER022W 2064 nt3.71□□□□□ -1.82
PUF3Q07807 TAF1YGR274C 3201 nt3.7□□□□□ -1.82
PUF3Q07807 NAN1YPL126W 2691 nt3.7□□□□□ -1.82
PUF3Q07807 GPI13YLL031C 3054 nt3.7□□□□□ -1.82
PUF3Q07807 PAU2YEL049W 363 nt3.7□□□□□ -1.82
PUF3Q07807 YPR108W-AYPR108W-A 213 nt3.7□□□□□ -1.82
PUF3Q07807 RAD2YGR258C 3096 nt3.7□□□□□ -1.82
PUF3Q07807 SPA2YLL021W 4401 nt3.7□□□□□ -1.82
PUF3Q07807 ALG8YOR067C 1734 nt3.7□□□□□ -1.82
PUF3Q07807 CPA2YJR109C 3357 nt3.69□□□□□ -1.82
PUF3Q07807 ANB1YJR047C 474 nt3.69□□□□□ -1.82
PUF3Q07807 PAU23YLR037C 375 nt3.69□□□□□ -1.82
PUF3Q07807 YMR172C-AYMR172C-A 384 nt3.69□□□□□ -1.82 RIP-Chip
PUF3Q07807 VPS41YDR080W 2979 nt3.69□□□□□ -1.82
PUF3Q07807 MDN1YLR106C 14733 nt3.68□□□□□ -1.82
PUF3Q07807 ECM25YJL201W 1800 nt3.68□□□□□ -1.82
PUF3Q07807 SNT1YCR033W 3681 nt3.68□□□□□ -1.82
PUF3Q07807 PAU13YHL046C 363 nt3.68□□□□□ -1.82
PUF3Q07807 SHH3YMR118C 591 nt3.68□□□□□ -1.82 RIP-Chip
PUF3Q07807 NUP60YAR002W 1620 nt3.68□□□□□ -1.82
PUF3Q07807 RIM20YOR275C 1986 nt3.67□□□□□ -1.82
PUF3Q07807 SWI1YPL016W 3945 nt3.67□□□□□ -1.82
PUF3Q07807 VIP1YLR410W 3441 nt3.67□□□□□ -1.82
PUF3Q07807 RPS24AYER074W 408 nt3.67□□□□□ -1.82
PUF3Q07807 VPS55YJR044C 423 nt3.67□□□□□ -1.82
PUF3Q07807 YNL010WYNL010W 726 nt3.67□□□□□ -1.82
PUF3Q07807 SWD3YBR175W 948 nt3.67□□□□□ -1.82
PUF3Q07807 NUP159YIL115C 4383 nt3.67□□□□□ -1.82
PUF3Q07807 ARG5,6YER069W 2592 nt3.67□□□□□ -1.82
PUF3Q07807 REV1YOR346W 2958 nt3.67□□□□□ -1.82
PUF3Q07807 tV(CAC)DtV(CAC)D 73 nt3.66□□□□□ -1.82
PUF3Q07807 tV(CAC)HtV(CAC)H 73 nt3.66□□□□□ -1.82
PUF3Q07807 XRS2YDR369C 2565 nt3.66□□□□□ -1.82
PUF3Q07807 ALY1YKR021W 2748 nt3.66□□□□□ -1.82
PUF3Q07807 SOK2YMR016C 2358 nt3.66□□□□□ -1.82
PUF3Q07807 STU1YBL034C 4542 nt3.65□□□□□ -1.82
PUF3Q07807 HBT1YDL223C 3141 nt3.65□□□□□ -1.82
PUF3Q07807 ZDS2YML109W 2829 nt3.65□□□□□ -1.82
PUF3Q07807 tT(UGU)Q1tT(UGU)Q1 76 nt3.65□□□□□ -1.83
PUF3Q07807 YKR033CYKR033C 426 nt3.65□□□□□ -1.83
PUF3Q07807 ATP15YPL271W 189 nt3.65□□□□□ -1.83
PUF3Q07807 ALA1YOR335C 2877 nt3.65□□□□□ -1.83
PUF3Q07807 ATG26YLR189C 3597 nt3.64□□□□□ -1.83
PUF3Q07807 RPL34BYIL052C 366 nt3.64□□□□□ -1.83
PUF3Q07807 YDR089WYDR089W 2610 nt3.64□□□□□ -1.83
PUF3Q07807 ARG2YJL071W 1725 nt3.64□□□□□ -1.83 RIP-Chip
PUF3Q07807 OLI1Q0130 231 nt3.63□□□□□ -1.83
PUF3Q07807 CYB5YNL111C 363 nt3.63□□□□□ -1.83
PUF3Q07807 LDS2YOL047C 1071 nt3.63□□□□□ -1.83
PUF3Q07807 LCB5YLR260W 2064 nt3.63□□□□□ -1.83
PUF3Q07807 CWH41YGL027C 2502 nt3.62□□□□□ -1.83
PUF3Q07807 tF(GAA)QtF(GAA)Q 75 nt3.62□□□□□ -1.83
PUF3Q07807 VTC1YER072W 390 nt3.62□□□□□ -1.83
PUF3Q07807 TIM8YJR135W-A 264 nt3.62□□□□□ -1.83
PUF3Q07807 YLR154W-EYLR154W-E 204 nt3.62□□□□□ -1.83
PUF3Q07807 PEX11YOL147C 711 nt3.62□□□□□ -1.83
PUF3Q07807 JEN1YKL217W 1851 nt3.62□□□□□ -1.83
PUF3Q07807 PWP2YCR057C 2772 nt3.62□□□□□ -1.83
PUF3Q07807 MRP10YDL045W-A 288 nt3.61□□□□□ -1.83 RIP-Chip
PUF3Q07807 YLR053CYLR053C 327 nt3.61□□□□□ -1.83
PUF3Q07807 CCT7YJL111W 1653 nt3.61□□□□□ -1.83
PUF3Q07807 TPS2YDR074W 2691 nt3.6□□□□□ -1.83
PUF3Q07807 MTC3YGL226W 372 nt3.6□□□□□ -1.83 RIP-Chip
PUF3Q07807 YJL020W-AYJL020W-A 258 nt3.6□□□□□ -1.83
PUF3Q07807 AIM9YER080W 1884 nt3.6□□□□□ -1.83
PUF3Q07807 TMA108YIL137C 2841 nt3.6□□□□□ -1.83
PUF3Q07807 YEL032C-AYEL032C-A 162 nt3.59□□□□□ -1.83
PUF3Q07807 RFC3YNL290W 1023 nt3.59□□□□□ -1.83
PUF3Q07807 RSC1YGR056W 2787 nt3.59□□□□□ -1.83
PUF3Q07807 RNR1YER070W 2667 nt3.58□□□□□ -1.84
PUF3Q07807 MTR4YJL050W 3222 nt3.58□□□□□ -1.84
PUF3Q07807 RPS23AYGR118W 438 nt3.58□□□□□ -1.84
PUF3Q07807 LSM1YJL124C 519 nt3.58□□□□□ -1.84
PUF3Q07807 PDS5YMR076C 3834 nt3.58□□□□□ -1.84
PUF3Q07807 RPL32YBL092W 393 nt3.58□□□□□ -1.84
PUF3Q07807 YPL182CYPL182C 384 nt3.58□□□□□ -1.84
PUF3Q07807 PEX1YKL197C 3132 nt3.58□□□□□ -1.84
PUF3Q07807 FRE8YLR047C 2061 nt3.58□□□□□ -1.84
PUF3Q07807 RAD4YER162C 2265 nt3.58□□□□□ -1.84
PUF3Q07807 NSP1YJL041W 2472 nt3.58□□□□□ -1.84
PUF3Q07807 KAP95YLR347C 2586 nt3.57□□□□□ -1.84
PUF3Q07807 FAP7YDL166C 594 nt3.57□□□□□ -1.84
PUF3Q07807 TSA2YDR453C 591 nt3.57□□□□□ -1.84
PUF3Q07807 YBL053WYBL053W 375 nt3.57□□□□□ -1.84
PUF3Q07807 ORC2YBR060C 1863 nt3.57□□□□□ -1.84
PUF3Q07807 SMC3YJL074C 3693 nt3.57□□□□□ -1.84
PUF3Q07807 ETP1YHL010C 1758 nt3.56□□□□□ -1.84
PUF3Q07807 SLP1YOR154W 1764 nt3.56□□□□□ -1.84
PUF3Q07807 ISU1YPL135W 498 nt3.56□□□□□ -1.84
PUF3Q07807 JJJ2YJL162C 1752 nt3.56□□□□□ -1.84
PUF3Q07807 TOP1YOL006C 2310 nt3.55□□□□□ -1.84
PUF3Q07807 snR60snR60 104 nt3.55□□□□□ -1.84
PUF3Q07807 RSF2YJR127C 4143 nt3.55□□□□□ -1.84
PUF3Q07807 SEA4YBL104C 3117 nt3.55□□□□□ -1.84
PUF3Q07807 FAS1YKL182W 6156 nt3.55□□□□□ -1.84
PUF3Q07807 LRE1YCL051W 1752 nt3.54□□□□□ -1.84 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms