RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 FAP1P53971 965 aa9.28□□□□□ -0.92
snR60snR60 MTC1P47018 478 aaKnown RBP8.97□□□□□ -0.97
snR60snR60 PRY3P47033 881 aa8.82□□□□□ -1
snR60snR60 YCK3P39962 524 aa8.45□□□□□ -1.06
snR60snR60 HAA1Q12753 694 aaKnown RBP8.19□□□□□ -1.1
snR60snR60 DRS1P32892 752 aaKnown RBP8.18□□□□□ -1.1
snR60snR60 AAD16Q02895 342 aa8.17□□□□□ -1.1
snR60snR60 PRI1P10363 409 aa8.07□□□□□ -1.12
snR60snR60 TSR3Q12094 313 aaKnown RBP7.53□□□□□ -1.2
snR60snR60 ISW2Q08773 1120 aa7.44□□□□□ -1.22
snR60snR60 BUD31P25337 157 aaPredicted RBP7.39□□□□□ -1.23
snR60snR60 RPG1P38249 964 aaKnown RBP7.38□□□□□ -1.23
snR60snR60 YGL015CP33199 130 aa7.3□□□□□ -1.24
snR60snR60 DIP2Q12220 943 aaPredicted RBP7.25□□□□□ -1.25
snR60snR60 MRPL32P25348 183 aa7.18□□□□□ -1.26
snR60snR60 RSE1Q04693 1361 aaKnown RBP7.05□□□□□ -1.28
snR60snR60 AVT3P36062 692 aa6.99□□□□□ -1.29
snR60snR60 SIS1P25294 352 aaKnown RBP6.83□□□□□ -1.32
snR60snR60 RPL17AP05740 184 aaKnown RBP6.81□□□□□ -1.32
snR60snR60 RPL17BP46990 184 aaKnown RBP6.81□□□□□ -1.32
snR60snR60 REB1P21538 810 aa6.78□□□□□ -1.32
snR60snR60 BFR2Q06631 534 aaKnown RBP6.72□□□□□ -1.33
snR60snR60 CDC27P38042 758 aa6.67□□□□□ -1.34
snR60snR60 UBP10P53874 792 aaPredicted RBP6.61□□□□□ -1.35
snR60snR60 MAP2P38174 421 aaKnown RBP6.6□□□□□ -1.35
snR60snR60 SPT21P35209 758 aa6.58□□□□□ -1.36
snR60snR60 YKR023WP36119 530 aaKnown RBP6.52□□□□□ -1.37
snR60snR60 UBP9P39967 754 aa6.52□□□□□ -1.37
snR60snR60 TFC8Q12308 588 aa6.39□□□□□ -1.39
snR60snR60 TGL3P40308 642 aa6.34□□□□□ -1.39
snR60snR60 HOP09932 586 aa6.33□□□□□ -1.4
snR60snR60 RIM101P33400 625 aa6.33□□□□□ -1.4
snR60snR60 DCD1P06773 312 aa6.29□□□□□ -1.4
snR60snR60 TIF4632P39936 914 aaKnown RBP6.29□□□□□ -1.4
snR60snR60 SCY1P53009 804 aa6.18□□□□□ -1.42
snR60snR60 SLX5P32828 619 aaKnown RBP6.17□□□□□ -1.42
snR60snR60 BCH2P36122 765 aa6.17□□□□□ -1.42
snR60snR60 OXP1P28273 1286 aa6.09□□□□□ -1.43
snR60snR60 YBL029C-AQ3E756 94 aa6.06□□□□□ -1.44
snR60snR60 EPS1P40557 701 aa5.99□□□□□ -1.45
snR60snR60 BDF1P35817 686 aa5.98□□□□□ -1.45
snR60snR60 MST1P07236 462 aa5.95□□□□□ -1.46
snR60snR60 YIL055CP40523 627 aaKnown RBP5.94□□□□□ -1.46
snR60snR60 AIR2Q12476 344 aaKnown RBP5.93□□□□□ -1.46
snR60snR60 PTP3P40048 928 aa5.92□□□□□ -1.46
snR60snR60 VNX1P42839 908 aa5.92□□□□□ -1.46
snR60snR60 RSM7P47150 247 aa5.9□□□□□ -1.46
snR60snR60 TFA1P36100 482 aa5.89□□□□□ -1.47
snR60snR60 NSR1P27476 414 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
snR60snR60 FKH1P40466 484 aa5.86□□□□□ -1.47
snR60snR60 YJL171CP46992 396 aa5.85□□□□□ -1.47
snR60snR60 BBC1P47068 1157 aa5.85□□□□□ -1.47
snR60snR60 AI2P03876 854 aa5.84□□□□□ -1.47
snR60snR60 SPP1Q03012 353 aa5.82□□□□□ -1.48
snR60snR60 YOR238WQ08634 303 aa5.82□□□□□ -1.48
snR60snR60 YAH1Q12184 172 aaKnown RBP5.8□□□□□ -1.48
snR60snR60 YLR271WQ06152 274 aa5.77□□□□□ -1.49
snR60snR60 YAP5P40574 245 aa5.76□□□□□ -1.49
snR60snR60 PSD2P53037 1138 aaKnown RBP5.73□□□□□ -1.49
snR60snR60 RGA2Q06407 1009 aa5.72□□□□□ -1.49
snR60snR60 WSC3Q12215 556 aa5.71□□□□□ -1.5
snR60snR60 TIF11P38912 153 aaKnown RBP5.69□□□□□ -1.5
snR60snR60 BMT6Q12291 365 aa5.68□□□□□ -1.5
snR60snR60 SSP1P38871 571 aa5.66□□□□□ -1.5
snR60snR60 ARP8Q12386 881 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
snR60snR60 LDB19Q12502 818 aa5.62□□□□□ -1.51
snR60snR60 MRM1P25270 412 aa5.61□□□□□ -1.51
snR60snR60 GTT3P39996 337 aa5.58□□□□□ -1.52
snR60snR60 IOC2Q12072 812 aa5.57□□□□□ -1.52
snR60snR60 MGA2P40578 1113 aa5.56□□□□□ -1.52
snR60snR60 VPS29P38759 282 aa5.54□□□□□ -1.52
snR60snR60 CST9Q06032 482 aa5.54□□□□□ -1.52
snR60snR60 MSB4Q12317 492 aa5.53□□□□□ -1.52
snR60snR60 YMR1P47147 688 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
snR60snR60 PIB1Q06651 286 aa5.52□□□□□ -1.53
snR60snR60 ULI1P43604 169 aa5.51□□□□□ -1.53
snR60snR60 RTG3P38165 486 aa5.5□□□□□ -1.53
snR60snR60 DBP1P24784 617 aaKnown RBP5.48□□□□□ -1.53
snR60snR60 EAP1P36041 632 aaKnown RBP5.48□□□□□ -1.53
snR60snR60 STS1P38637 319 aa5.47□□□□□ -1.53
snR60snR60 SAM3Q08986 587 aa5.47□□□□□ -1.53
snR60snR60 YOL036WQ08206 761 aa5.46□□□□□ -1.54
snR60snR60 VMA1P17255 1071 aaKnown RBP5.45□□□□□ -1.54
snR60snR60 YFR006WP43590 535 aa5.43□□□□□ -1.54
snR60snR60 TRP5P00931 707 aaKnown RBP5.42□□□□□ -1.54
snR60snR60 RCR1P38212 213 aa5.42□□□□□ -1.54
snR60snR60 SET4P42948 560 aa5.42□□□□□ -1.54
snR60snR60 RTG1P32607 177 aa5.39□□□□□ -1.55
snR60snR60 YNL035CP53962 389 aaKnown RBP5.39□□□□□ -1.55
snR60snR60 SEC61P32915 480 aa5.38□□□□□ -1.55
snR60snR60 BCK2P33306 851 aa5.38□□□□□ -1.55
snR60snR60 RGA1P39083 1007 aa5.37□□□□□ -1.55
snR60snR60 NCR1Q12200 1170 aa5.37□□□□□ -1.55
snR60snR60 ABP1P15891 592 aaKnown RBP5.36□□□□□ -1.55
snR60snR60 DAN4P47179 1161 aa5.35□□□□□ -1.55
snR60snR60 JIP4Q03361 876 aa5.34□□□□□ -1.55
snR60snR60 GYP5Q12344 894 aa5.33□□□□□ -1.56
snR60snR60 HTA1P04911 132 aaKnown RBP5.29□□□□□ -1.56
snR60snR60 HTA2P04912 132 aa5.29□□□□□ -1.56
snR60snR60 PTC4P38089 393 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms