RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	DRS1	P32892	752 aa	Known RBP	7.04	□□□□□ -1.28
TOP1	YOL006C	TFA1	P36100	482 aa		6.59	□□□□□ -1.35
TOP1	YOL006C	BFR2	Q06631	534 aa	Known RBP	6.43	□□□□□ -1.38
TOP1	YOL006C	RQC2	Q12532	1038 aa	Known RBP	6.42	□□□□□ -1.38
TOP1	YOL006C	TAF7	Q05021	590 aa		6.21	□□□□□ -1.42
TOP1	YOL006C	MTC1	P47018	478 aa	Known RBP	6.2	□□□□□ -1.42
TOP1	YOL006C	FAP1	P53971	965 aa		5.89	□□□□□ -1.47
TOP1	YOL006C	AVT3	P36062	692 aa		5.86	□□□□□ -1.47
TOP1	YOL006C	DMA1	P38823	416 aa		5.74	□□□□□ -1.49
TOP1	YOL006C	DIP2	Q12220	943 aa	Predicted RBP	5.71	□□□□□ -1.49
TOP1	YOL006C	LEO1	P38439	464 aa		5.65	□□□□□ -1.5
TOP1	YOL006C	PRY3	P47033	881 aa		5.62	□□□□□ -1.51
TOP1	YOL006C	LEU3	P08638	886 aa		5.31	□□□□□ -1.56
TOP1	YOL006C	PTP3	P40048	928 aa		5.26	□□□□□ -1.57
TOP1	YOL006C	YCK3	P39962	524 aa		5.25	□□□□□ -1.57
TOP1	YOL006C	HAA1	Q12753	694 aa	Known RBP	5.23	□□□□□ -1.57
TOP1	YOL006C	DMA2	P53924	522 aa		5.19	□□□□□ -1.58
TOP1	YOL006C	SAS10	Q12136	610 aa	Predicted RBP	5.17	□□□□□ -1.58
TOP1	YOL006C	RSE1	Q04693	1361 aa	Known RBP	5.17	□□□□□ -1.58
TOP1	YOL006C	AIM44	Q99299	758 aa		5.15	□□□□□ -1.58
TOP1	YOL006C	NAP1	P25293	417 aa	Known RBP	5.12	□□□□□ -1.59
TOP1	YOL006C	ABP1	P15891	592 aa	Known RBP	5.12	□□□□□ -1.59
TOP1	YOL006C	IFH1	P39520	1085 aa		5.12	□□□□□ -1.59
TOP1	YOL006C	RLF2	Q12495	606 aa		5.12	□□□□□ -1.59
TOP1	YOL006C	RPN1	P38764	993 aa	Known RBP	5.08	□□□□□ -1.6
TOP1	YOL006C	IOC4	Q04213	475 aa		5.06	□□□□□ -1.6
TOP1	YOL006C	SSP1	P38871	571 aa		5.05	□□□□□ -1.6
TOP1	YOL006C	ORC1	P54784	914 aa	Predicted RBP	4.99	□□□□□ -1.61
TOP1	YOL006C	CKB1	P43639	278 aa		4.96	□□□□□ -1.61
TOP1	YOL006C	URN1	Q06525	465 aa	Known RBP	4.94	□□□□□ -1.62
TOP1	YOL006C	BUD31	P25337	157 aa	Predicted RBP	4.93	□□□□□ -1.62
TOP1	YOL006C	RPL17A	P05740	184 aa	Known RBP	4.92	□□□□□ -1.62
TOP1	YOL006C	RPL17B	P46990	184 aa	Known RBP	4.92	□□□□□ -1.62
TOP1	YOL006C	RIM101	P33400	625 aa		4.91	□□□□□ -1.62
TOP1	YOL006C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
TOP1	YOL006C	AAD16	Q02895	342 aa		4.88	□□□□□ -1.63
TOP1	YOL006C	YML020W	Q03722	664 aa		4.88	□□□□□ -1.63
TOP1	YOL006C	ISW2	Q08773	1120 aa		4.86	□□□□□ -1.63
TOP1	YOL006C	SPB4	P25808	606 aa	Predicted RBP	4.85	□□□□□ -1.63
TOP1	YOL006C	NOP8	Q08287	484 aa	Predicted RBP	4.84	□□□□□ -1.63
TOP1	YOL006C	YAH1	Q12184	172 aa	Known RBP	4.83	□□□□□ -1.64
TOP1	YOL006C	SPT21	P35209	758 aa		4.82	□□□□□ -1.64
TOP1	YOL006C	HGH1	P48362	394 aa	Known RBP	4.8	□□□□□ -1.64
TOP1	YOL006C	REB1	P21538	810 aa		4.8	□□□□□ -1.64
TOP1	YOL006C	YLR271W	Q06152	274 aa		4.8	□□□□□ -1.64
TOP1	YOL006C	MGA2	P40578	1113 aa		4.79	□□□□□ -1.64
TOP1	YOL006C	OXP1	P28273	1286 aa		4.79	□□□□□ -1.64
TOP1	YOL006C	SLX8	P40072	274 aa		4.79	□□□□□ -1.64
TOP1	YOL006C	TOP1	P04786	769 aa		4.78	□□□□□ -1.64
TOP1	YOL006C	KIN1	P13185	1064 aa		4.78	□□□□□ -1.64
TOP1	YOL006C	RPG1	P38249	964 aa	Known RBP	4.78	□□□□□ -1.64
TOP1	YOL006C	NOP7	P53261	605 aa	Known RBP	4.77	□□□□□ -1.65
TOP1	YOL006C	YRB30	P53107	440 aa	Predicted RBP	4.76	□□□□□ -1.65
TOP1	YOL006C	SSA1	P10591	642 aa	Known RBP	4.75	□□□□□ -1.65
TOP1	YOL006C	GEF1	P37020	779 aa		4.74	□□□□□ -1.65
TOP1	YOL006C	VPS70	P47161	811 aa		4.74	□□□□□ -1.65
TOP1	YOL006C	YPR148C	Q06523	435 aa		4.73	□□□□□ -1.65
TOP1	YOL006C	SNU71	P53207	620 aa	Known RBP	4.73	□□□□□ -1.65
TOP1	YOL006C	YNR021W	P53723	404 aa	Known RBP	4.72	□□□□□ -1.65
TOP1	YOL006C	DSF2	P38213	736 aa		4.71	□□□□□ -1.66
TOP1	YOL006C	YIL055C	P40523	627 aa	Known RBP	4.71	□□□□□ -1.66
TOP1	YOL006C	SET1	P38827	1080 aa	Known RBP	4.71	□□□□□ -1.66
TOP1	YOL006C	CST9	Q06032	482 aa		4.71	□□□□□ -1.66
TOP1	YOL006C	BRL1	P38770	471 aa		4.7	□□□□□ -1.66
TOP1	YOL006C	MRX12	P47084	519 aa		4.68	□□□□□ -1.66
TOP1	YOL006C	SUB2	Q07478	446 aa	Known RBP	4.68	□□□□□ -1.66
TOP1	YOL006C	AIM7	Q12156	149 aa		4.68	□□□□□ -1.66
TOP1	YOL006C	MAM3	Q12296	706 aa		4.68	□□□□□ -1.66
TOP1	YOL006C	PRI1	P10363	409 aa		4.67	□□□□□ -1.66
TOP1	YOL006C	GLC3	P32775	704 aa		4.67	□□□□□ -1.66
TOP1	YOL006C	GUA1	P38625	525 aa	Known RBP	4.66	□□□□□ -1.66
TOP1	YOL006C	PBS2	P08018	668 aa		4.65	□□□□□ -1.66
TOP1	YOL006C	MET10	P39692	1035 aa		4.65	□□□□□ -1.66
TOP1	YOL006C	SLD2	P34252	453 aa		4.64	□□□□□ -1.67
TOP1	YOL006C	RAM2	P29703	316 aa		4.63	□□□□□ -1.67
TOP1	YOL006C	PAM1	P37304	830 aa	Known RBP	4.63	□□□□□ -1.67
TOP1	YOL006C	RSM7	P47150	247 aa		4.63	□□□□□ -1.67
TOP1	YOL006C	BRN1	P38170	754 aa		4.62	□□□□□ -1.67
TOP1	YOL006C	YTA7	P40340	1379 aa		4.62	□□□□□ -1.67
TOP1	YOL006C	HPC2	Q01448	625 aa		4.62	□□□□□ -1.67
TOP1	YOL006C	NUG1	P40010	520 aa	Known RBP	4.61	□□□□□ -1.67
TOP1	YOL006C	TFB3	Q03290	321 aa		4.6	□□□□□ -1.67
TOP1	YOL006C	RRN6	P32786	894 aa		4.59	□□□□□ -1.67
TOP1	YOL006C	SPC42	P36094	363 aa		4.59	□□□□□ -1.67
TOP1	YOL006C	PSD2	P53037	1138 aa	Known RBP	4.59	□□□□□ -1.67
TOP1	YOL006C	FAR11	P53917	953 aa		4.58	□□□□□ -1.68
TOP1	YOL006C	DOS2	P54858	310 aa		4.58	□□□□□ -1.68
TOP1	YOL006C	SSA4	P22202	642 aa	Known RBP	4.57	□□□□□ -1.68
TOP1	YOL006C	SWE1	P32944	819 aa		4.57	□□□□□ -1.68
TOP1	YOL006C	IES2	P40154	320 aa		4.57	□□□□□ -1.68
TOP1	YOL006C	ATG36	P46983	293 aa		4.57	□□□□□ -1.68
TOP1	YOL006C	MAK21	Q12176	1025 aa	Known RBP	4.57	□□□□□ -1.68
TOP1	YOL006C	SUB1	P54000	292 aa	Known RBP	4.57	□□□□□ -1.68
TOP1	YOL006C	DIT2	P21595	489 aa		4.56	□□□□□ -1.68
TOP1	YOL006C	ASF1	P32447	279 aa		4.56	□□□□□ -1.68
TOP1	YOL006C	LAM6	Q08001	693 aa		4.56	□□□□□ -1.68
TOP1	YOL006C	NUP42	P49686	430 aa	Known RBP	4.56	□□□□□ -1.68
TOP1	YOL006C	RTS3	P53289	263 aa		4.56	□□□□□ -1.68
TOP1	YOL006C	HEM3	P28789	327 aa		4.55	□□□□□ -1.68
TOP1	YOL006C	OCA5	P38738	679 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms