RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeastyeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAD4YER162C MON2P48563 1636 aaPredicted RBP8.13□□□□□ -1.11
RAD4YER162C INO80P53115 1489 aa8.04□□□□□ -1.12
RAD4YER162C DNA2P38859 1522 aa7.68□□□□□ -1.18
RAD4YER162C SWR1Q05471 1514 aa7.63□□□□□ -1.19
RAD4YER162C KOG1P38873 1557 aa7.58□□□□□ -1.2
RAD4YER162C TY1B-DR4Q07793 1604 aa7.5□□□□□ -1.21
RAD4YER162C TCB3Q03640 1545 aaKnown RBP7.49□□□□□ -1.21
RAD4YER162C RSE1Q04693 1361 aaKnown RBP7.46□□□□□ -1.22
RAD4YER162C SGS1P35187 1447 aa7.17□□□□□ -1.26
RAD4YER162C SPA2P23201 1466 aaKnown RBP7.16□□□□□ -1.26
RAD4YER162C HSL1P34244 1518 aa7.15□□□□□ -1.27
RAD4YER162C SPT6P23615 1451 aaKnown RBP7.13□□□□□ -1.27
RAD4YER162C ECM5Q03214 1411 aa7.05□□□□□ -1.28
RAD4YER162C THO2P53552 1597 aaKnown RBP7.05□□□□□ -1.28
RAD4YER162C BUD4P47136 1447 aa7□□□□□ -1.29
RAD4YER162C HIR3P47171 1648 aa6.97□□□□□ -1.29
RAD4YER162C MDS3P53094 1487 aa6.95□□□□□ -1.3
RAD4YER162C REV3P14284 1504 aa6.91□□□□□ -1.3
RAD4YER162C MTC1P47018 478 aaKnown RBP6.9□□□□□ -1.3
RAD4YER162C PEP1P32319 1579 aa6.89□□□□□ -1.31
RAD4YER162C BPT1P14772 1559 aa6.79□□□□□ -1.32
RAD4YER162C ATG2P53855 1592 aa6.78□□□□□ -1.32
RAD4YER162C XRN1P22147 1528 aaKnown RBP6.78□□□□□ -1.32
RAD4YER162C SSK2P53599 1579 aa6.69□□□□□ -1.34
RAD4YER162C YCF1P39109 1515 aaKnown RBP6.67□□□□□ -1.34
RAD4YER162C SIN3P22579 1536 aa6.63□□□□□ -1.35
RAD4YER162C MIF2P35201 549 aa6.62□□□□□ -1.35
RAD4YER162C SKI3P17883 1432 aaKnown RBP6.56□□□□□ -1.36
RAD4YER162C MET5P47169 1442 aa6.54□□□□□ -1.36
RAD4YER162C MYO2P19524 1574 aaKnown RBP6.54□□□□□ -1.36
RAD4YER162C TAF2P23255 1407 aa6.52□□□□□ -1.37
RAD4YER162C LTE1P07866 1435 aa6.5□□□□□ -1.37
RAD4YER162C ESP1Q03018 1630 aa6.5□□□□□ -1.37
RAD4YER162C UFD4P33202 1483 aa6.5□□□□□ -1.37
RAD4YER162C SSN2P38931 1420 aa6.49□□□□□ -1.37
RAD4YER162C CDC25P04821 1589 aa6.47□□□□□ -1.37
RAD4YER162C BNI1P41832 1953 aa6.45□□□□□ -1.38
RAD4YER162C CHD1P32657 1468 aa6.45□□□□□ -1.38
RAD4YER162C SCC2Q04002 1493 aa6.45□□□□□ -1.38
RAD4YER162C YPK9Q12697 1472 aa6.45□□□□□ -1.38
RAD4YER162C DNF1P32660 1571 aa6.45□□□□□ -1.38
RAD4YER162C RPO31P04051 1460 aa6.44□□□□□ -1.38
RAD4YER162C RPA190P10964 1664 aaKnown RBP6.43□□□□□ -1.38
RAD4YER162C RKR1Q04781 1562 aa6.42□□□□□ -1.38
RAD4YER162C DRS1P32892 752 aaKnown RBP6.42□□□□□ -1.38
RAD4YER162C ESC1Q03661 1658 aaKnown RBP6.42□□□□□ -1.38
RAD4YER162C TY1B-BRQ12193 1756 aa6.4□□□□□ -1.38
RAD4YER162C TY1B-GR3Q12316 1755 aa6.4□□□□□ -1.38
RAD4YER162C TY1B-ORQ92393 1755 aa6.4□□□□□ -1.38
RAD4YER162C TY2B-LR1P0C2J3 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-FP0CX63 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-GR2P0CX64 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-CP25384 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-DR2Q03494 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY1B-DR1Q03855 1755 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-DR3Q07791 1770 aaKnown RBP6.38□□□□□ -1.39
RAD4YER162C TY2B-OR1Q12113 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-DR1Q12472 1770 aa6.38□□□□□ -1.39
RAD4YER162C TY2B-OR2Q12501 1770 aa6.38□□□□□ -1.39
RAD4YER162C PAN1P32521 1480 aa6.38□□□□□ -1.39
RAD4YER162C GEA2P39993 1459 aaKnown RBP6.37□□□□□ -1.39
RAD4YER162C YFR006WP43590 535 aa6.35□□□□□ -1.39
RAD4YER162C ITT1Q04638 464 aa6.33□□□□□ -1.4
RAD4YER162C TY1B-HO13535 1793 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-DR5P0C2I2 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-DR6P0C2I3 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-LR2P0C2I5 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-LR3P0C2I6 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C TY1B-PR1P0C2I9 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C TY1B-PR2P0C2J0 1756 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-PR3P0C2J1 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C TY1B-JR1P47098 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-ML2Q03434 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C TY1B-ER1Q03612 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-ML1Q04711 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C TY1B-GR2Q12269 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-OLQ12273 1755 aa6.31□□□□□ -1.4
RAD4YER162C TY1B-PLQ12414 1755 aaKnown RBP6.31□□□□□ -1.4
RAD4YER162C IRC20Q06554 1556 aa6.3□□□□□ -1.4
RAD4YER162C TY2B-BQ12491 1770 aa6.29□□□□□ -1.4
RAD4YER162C TOP2P06786 1428 aaKnown RBP6.29□□□□□ -1.4
RAD4YER162C ABP1P15891 592 aaKnown RBP6.29□□□□□ -1.4
RAD4YER162C MMS1Q06211 1407 aa6.29□□□□□ -1.4
RAD4YER162C MMS22Q06164 1454 aa6.26□□□□□ -1.41
RAD4YER162C TY1B-DR3Q99231 1755 aa6.26□□□□□ -1.41
RAD4YER162C YRF1-1P0CX20 1796 aa6.25□□□□□ -1.41
RAD4YER162C YRF1-5P0CX21 1796 aa6.25□□□□□ -1.41
RAD4YER162C YRF1-8P0CX22 1796 aa6.25□□□□□ -1.41
RAD4YER162C TRM732Q03496 1420 aa6.24□□□□□ -1.41
RAD4YER162C DRS2P39524 1355 aa6.23□□□□□ -1.41
RAD4YER162C RQC2Q12532 1038 aaKnown RBP6.22□□□□□ -1.41
RAD4YER162C VPS15P22219 1454 aa6.21□□□□□ -1.42
RAD4YER162C NUP159P40477 1460 aa6.21□□□□□ -1.42
RAD4YER162C DNF2Q12675 1612 aa6.19□□□□□ -1.42
RAD4YER162C TY1B-JR2P47100 1755 aaKnown RBP6.17□□□□□ -1.42
RAD4YER162C TY1B-ER2Q03619 1755 aa6.17□□□□□ -1.42
RAD4YER162C TY1B-MR1Q04214 1755 aa6.17□□□□□ -1.42
RAD4YER162C TY1B-MR2Q04670 1755 aaKnown RBP6.17□□□□□ -1.42
RAD4YER162C TY1B-LR1Q12088 1755 aaKnown RBP6.17□□□□□ -1.42
RAD4YER162C TY1B-NL1Q12112 1755 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms