RNA–Protein interactions for RNA: YER022W

SRB4, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB4, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB4YER022W FAP1P53971 965 aa9.55□□□□□ -0.88
SRB4YER022W PRY3P47033 881 aa9.03□□□□□ -0.96
SRB4YER022W DRS1P32892 752 aaKnown RBP8.5□□□□□ -1.05
SRB4YER022W HAA1Q12753 694 aaKnown RBP8.38□□□□□ -1.07
SRB4YER022W YCK3P39962 524 aa8.29□□□□□ -1.08
SRB4YER022W MTC1P47018 478 aaKnown RBP8.22□□□□□ -1.09
SRB4YER022W AAD16Q02895 342 aa8.13□□□□□ -1.11
SRB4YER022W PRI1P10363 409 aa7.88□□□□□ -1.15
SRB4YER022W BUD31P25337 157 aaPredicted RBP7.61□□□□□ -1.19
SRB4YER022W BFR2Q06631 534 aaKnown RBP7.45□□□□□ -1.22
SRB4YER022W YGL015CP33199 130 aa7.39□□□□□ -1.23
SRB4YER022W TSR3Q12094 313 aaKnown RBP7.36□□□□□ -1.23
SRB4YER022W TFA1P36100 482 aa7.26□□□□□ -1.25
SRB4YER022W AVT3P36062 692 aa7.19□□□□□ -1.26
SRB4YER022W ISW2Q08773 1120 aa7.19□□□□□ -1.26
SRB4YER022W MRPL32P25348 183 aa7.15□□□□□ -1.26
SRB4YER022W DIP2Q12220 943 aaPredicted RBP7.15□□□□□ -1.27
SRB4YER022W SIS1P25294 352 aaKnown RBP7.13□□□□□ -1.27
SRB4YER022W RPG1P38249 964 aaKnown RBP7.11□□□□□ -1.27
SRB4YER022W UBP9P39967 754 aa6.73□□□□□ -1.33
SRB4YER022W RSE1Q04693 1361 aaKnown RBP6.64□□□□□ -1.35
SRB4YER022W UBP10P53874 792 aaPredicted RBP6.49□□□□□ -1.37
SRB4YER022W RPL17AP05740 184 aaKnown RBP6.39□□□□□ -1.39
SRB4YER022W MAP2P38174 421 aaKnown RBP6.39□□□□□ -1.39
SRB4YER022W RPL17BP46990 184 aaKnown RBP6.39□□□□□ -1.39
SRB4YER022W CDC27P38042 758 aa6.33□□□□□ -1.4
SRB4YER022W TIF4632P39936 914 aaKnown RBP6.3□□□□□ -1.4
SRB4YER022W RQC2Q12532 1038 aaKnown RBP6.27□□□□□ -1.41
SRB4YER022W SPT21P35209 758 aa6.26□□□□□ -1.41
SRB4YER022W TGL3P40308 642 aa6.24□□□□□ -1.41
SRB4YER022W REB1P21538 810 aa6.23□□□□□ -1.41
SRB4YER022W RIM101P33400 625 aa6.21□□□□□ -1.41
SRB4YER022W PTP3P40048 928 aa6.11□□□□□ -1.43
SRB4YER022W DMA1P38823 416 aa6.08□□□□□ -1.44
SRB4YER022W OXP1P28273 1286 aa6.06□□□□□ -1.44
SRB4YER022W SSP1P38871 571 aa6.02□□□□□ -1.45
SRB4YER022W SLX5P32828 619 aaKnown RBP6.02□□□□□ -1.45
SRB4YER022W YJL171CP46992 396 aa6.01□□□□□ -1.45
SRB4YER022W YKR023WP36119 530 aaKnown RBP5.99□□□□□ -1.45
SRB4YER022W YBL029C-AQ3E756 94 aa5.95□□□□□ -1.46
SRB4YER022W SCY1P53009 804 aa5.94□□□□□ -1.46
SRB4YER022W RGA2Q06407 1009 aa5.92□□□□□ -1.46
SRB4YER022W YLR271WQ06152 274 aa5.91□□□□□ -1.46
SRB4YER022W YAH1Q12184 172 aaKnown RBP5.91□□□□□ -1.46
SRB4YER022W TFC8Q12308 588 aa5.84□□□□□ -1.47
SRB4YER022W AIR2Q12476 344 aaKnown RBP5.84□□□□□ -1.47
SRB4YER022W YIL055CP40523 627 aaKnown RBP5.83□□□□□ -1.48
SRB4YER022W HOP09932 586 aa5.83□□□□□ -1.48
SRB4YER022W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SRB4YER022W RSM7P47150 247 aa5.8□□□□□ -1.48
SRB4YER022W DCD1P06773 312 aa5.79□□□□□ -1.48
SRB4YER022W VNX1P42839 908 aa5.78□□□□□ -1.48
SRB4YER022W SPP1Q03012 353 aa5.78□□□□□ -1.48
SRB4YER022W MGA2P40578 1113 aa5.77□□□□□ -1.49
SRB4YER022W FKH1P40466 484 aa5.76□□□□□ -1.49
SRB4YER022W CST9Q06032 482 aa5.76□□□□□ -1.49
SRB4YER022W PSD2P53037 1138 aaKnown RBP5.73□□□□□ -1.49
SRB4YER022W SAS10Q12136 610 aaPredicted RBP5.71□□□□□ -1.5
SRB4YER022W BMT6Q12291 365 aa5.71□□□□□ -1.5
SRB4YER022W MST1P07236 462 aa5.69□□□□□ -1.5
SRB4YER022W AI2P03876 854 aa5.68□□□□□ -1.5
SRB4YER022W BCH2P36122 765 aa5.68□□□□□ -1.5
SRB4YER022W LEO1P38439 464 aa5.64□□□□□ -1.51
SRB4YER022W YOR238WQ08634 303 aa5.64□□□□□ -1.51
SRB4YER022W TAF7Q05021 590 aa5.63□□□□□ -1.51
SRB4YER022W EPS1P40557 701 aa5.59□□□□□ -1.51
SRB4YER022W RAM2P29703 316 aa5.59□□□□□ -1.52
SRB4YER022W LEU3P08638 886 aa5.58□□□□□ -1.52
SRB4YER022W WSC3Q12215 556 aa5.58□□□□□ -1.52
SRB4YER022W TIF11P38912 153 aaKnown RBP5.57□□□□□ -1.52
SRB4YER022W BBC1P47068 1157 aa5.57□□□□□ -1.52
SRB4YER022W BDF1P35817 686 aa5.55□□□□□ -1.52
SRB4YER022W RCR1P38212 213 aa5.55□□□□□ -1.52
SRB4YER022W MRM1P25270 412 aa5.52□□□□□ -1.53
SRB4YER022W RGA1P39083 1007 aa5.49□□□□□ -1.53
SRB4YER022W LDB19Q12502 818 aa5.49□□□□□ -1.53
SRB4YER022W SET1P38827 1080 aaKnown RBP5.47□□□□□ -1.53
SRB4YER022W YPR148CQ06523 435 aa5.47□□□□□ -1.53
SRB4YER022W RTG3P38165 486 aa5.45□□□□□ -1.54
SRB4YER022W VPS29P38759 282 aa5.44□□□□□ -1.54
SRB4YER022W MAK11P20484 414 aaKnown RBP5.43□□□□□ -1.54
SRB4YER022W VPS70P47161 811 aa5.4□□□□□ -1.54
SRB4YER022W BCK2P33306 851 aa5.39□□□□□ -1.55
SRB4YER022W NSR1P27476 414 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SRB4YER022W RPN1P38764 993 aaKnown RBP5.37□□□□□ -1.55
SRB4YER022W CKB1P43639 278 aa5.37□□□□□ -1.55
SRB4YER022W ULI1P43604 169 aa5.36□□□□□ -1.55
SRB4YER022W COQ8P27697 501 aa5.36□□□□□ -1.55
SRB4YER022W IFH1P39520 1085 aa5.35□□□□□ -1.55
SRB4YER022W STS1P38637 319 aa5.35□□□□□ -1.55
SRB4YER022W GTT3P39996 337 aa5.34□□□□□ -1.55
SRB4YER022W EDS1P38073 919 aa5.33□□□□□ -1.56
SRB4YER022W SPB4P25808 606 aaPredicted RBP5.33□□□□□ -1.56
SRB4YER022W YAP5P40574 245 aa5.33□□□□□ -1.56
SRB4YER022W DSF2P38213 736 aa5.32□□□□□ -1.56
SRB4YER022W IOC2Q12072 812 aa5.32□□□□□ -1.56
SRB4YER022W YMR1P47147 688 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SRB4YER022W DMA2P53924 522 aa5.3□□□□□ -1.56
SRB4YER022W PBS2P08018 668 aa5.29□□□□□ -1.56
SRB4YER022W NOP53Q12080 455 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms