RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeastyeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HBT1YDL223C DRS1P32892 752 aaKnown RBP8.5□□□□□ -1.05
HBT1YDL223C MTC1P47018 478 aaKnown RBP7.99□□□□□ -1.13
HBT1YDL223C BFR2Q06631 534 aaKnown RBP7.53□□□□□ -1.2
HBT1YDL223C TFA1P36100 482 aa7.43□□□□□ -1.22
HBT1YDL223C AVT3P36062 692 aa7.16□□□□□ -1.26
HBT1YDL223C DIP2Q12220 943 aaPredicted RBP7.07□□□□□ -1.28
HBT1YDL223C RQC2Q12532 1038 aaKnown RBP6.51□□□□□ -1.37
HBT1YDL223C RSE1Q04693 1361 aaKnown RBP6.48□□□□□ -1.37
HBT1YDL223C DMA1P38823 416 aa6.35□□□□□ -1.39
HBT1YDL223C RPG1P38249 964 aaKnown RBP6.3□□□□□ -1.4
HBT1YDL223C ISW2Q08773 1120 aa6.28□□□□□ -1.4
HBT1YDL223C RPL17AP05740 184 aaKnown RBP6.28□□□□□ -1.4
HBT1YDL223C RPL17BP46990 184 aaKnown RBP6.28□□□□□ -1.4
HBT1YDL223C PTP3P40048 928 aa6.23□□□□□ -1.41
HBT1YDL223C PRI1P10363 409 aa6.16□□□□□ -1.42
HBT1YDL223C SPT21P35209 758 aa6.15□□□□□ -1.43
HBT1YDL223C RIM101P33400 625 aa6.12□□□□□ -1.43
HBT1YDL223C TAF7Q05021 590 aa6.09□□□□□ -1.43
HBT1YDL223C REB1P21538 810 aa6.08□□□□□ -1.44
HBT1YDL223C OXP1P28273 1286 aa6.03□□□□□ -1.44
HBT1YDL223C SSP1P38871 571 aa6.02□□□□□ -1.45
HBT1YDL223C FAP1P53971 965 aa5.97□□□□□ -1.45
HBT1YDL223C AAD16Q02895 342 aa5.94□□□□□ -1.46
HBT1YDL223C YAH1Q12184 172 aaKnown RBP5.93□□□□□ -1.46
HBT1YDL223C TSR3Q12094 313 aaKnown RBP5.92□□□□□ -1.46
HBT1YDL223C YLR271WQ06152 274 aa5.91□□□□□ -1.46
HBT1YDL223C LEO1P38439 464 aa5.89□□□□□ -1.47
HBT1YDL223C YKR023WP36119 530 aaKnown RBP5.86□□□□□ -1.47
HBT1YDL223C SAS10Q12136 610 aaPredicted RBP5.82□□□□□ -1.48
HBT1YDL223C CST9Q06032 482 aa5.79□□□□□ -1.48
HBT1YDL223C MON2P48563 1636 aaPredicted RBP5.78□□□□□ -1.48
HBT1YDL223C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
HBT1YDL223C YIL055CP40523 627 aaKnown RBP5.75□□□□□ -1.49
HBT1YDL223C DCD1P06773 312 aa5.74□□□□□ -1.49
HBT1YDL223C LEU3P08638 886 aa5.74□□□□□ -1.49
HBT1YDL223C HOP09932 586 aa5.73□□□□□ -1.49
HBT1YDL223C MGA2P40578 1113 aa5.73□□□□□ -1.49
HBT1YDL223C RSM7P47150 247 aa5.72□□□□□ -1.49
HBT1YDL223C INO80P53115 1489 aa5.7□□□□□ -1.5
HBT1YDL223C TFC8Q12308 588 aa5.69□□□□□ -1.5
HBT1YDL223C PSD2P53037 1138 aaKnown RBP5.68□□□□□ -1.5
HBT1YDL223C CDC27P38042 758 aa5.64□□□□□ -1.51
HBT1YDL223C ABP1P15891 592 aaKnown RBP5.63□□□□□ -1.51
HBT1YDL223C DMA2P53924 522 aa5.62□□□□□ -1.51
HBT1YDL223C AI2P03876 854 aa5.61□□□□□ -1.51
HBT1YDL223C RAM2P29703 316 aa5.61□□□□□ -1.51
HBT1YDL223C PRY3P47033 881 aa5.61□□□□□ -1.51
HBT1YDL223C RCR1P38212 213 aa5.59□□□□□ -1.51
HBT1YDL223C BCH2P36122 765 aa5.57□□□□□ -1.52
HBT1YDL223C MRPL32P25348 183 aa5.54□□□□□ -1.52
HBT1YDL223C YCK3P39962 524 aa5.54□□□□□ -1.52
HBT1YDL223C SET1P38827 1080 aaKnown RBP5.51□□□□□ -1.53
HBT1YDL223C RPN1P38764 993 aaKnown RBP5.51□□□□□ -1.53
HBT1YDL223C SWR1Q05471 1514 aa5.49□□□□□ -1.53
HBT1YDL223C VPS70P47161 811 aa5.49□□□□□ -1.53
HBT1YDL223C MRM1P25270 412 aa5.48□□□□□ -1.53
HBT1YDL223C YPR148CQ06523 435 aa5.48□□□□□ -1.53
HBT1YDL223C EPS1P40557 701 aa5.47□□□□□ -1.53
HBT1YDL223C TY1B-DR4Q07793 1604 aa5.47□□□□□ -1.53
HBT1YDL223C DNA2P38859 1522 aa5.46□□□□□ -1.54
HBT1YDL223C SPB4P25808 606 aaPredicted RBP5.45□□□□□ -1.54
HBT1YDL223C TCB3Q03640 1545 aaKnown RBP5.45□□□□□ -1.54
HBT1YDL223C BDF1P35817 686 aa5.44□□□□□ -1.54
HBT1YDL223C BBC1P47068 1157 aa5.43□□□□□ -1.54
HBT1YDL223C KOG1P38873 1557 aa5.4□□□□□ -1.55
HBT1YDL223C CKB1P43639 278 aa5.39□□□□□ -1.55
HBT1YDL223C DSF2P38213 736 aa5.38□□□□□ -1.55
HBT1YDL223C VPS29P38759 282 aa5.38□□□□□ -1.55
HBT1YDL223C MAK11P20484 414 aaKnown RBP5.37□□□□□ -1.55
HBT1YDL223C RTG3P38165 486 aa5.36□□□□□ -1.55
HBT1YDL223C PBS2P08018 668 aa5.35□□□□□ -1.55
HBT1YDL223C SCY1P53009 804 aa5.34□□□□□ -1.55
HBT1YDL223C SGS1P35187 1447 aa5.34□□□□□ -1.56
HBT1YDL223C COQ8P27697 501 aa5.34□□□□□ -1.56
HBT1YDL223C KIN1P13185 1064 aa5.33□□□□□ -1.56
HBT1YDL223C GLC3P32775 704 aa5.32□□□□□ -1.56
HBT1YDL223C EDS1P38073 919 aa5.32□□□□□ -1.56
HBT1YDL223C RLF2Q12495 606 aa5.32□□□□□ -1.56
HBT1YDL223C DIT2P21595 489 aa5.31□□□□□ -1.56
HBT1YDL223C STS1P38637 319 aa5.3□□□□□ -1.56
HBT1YDL223C IFH1P39520 1085 aa5.3□□□□□ -1.56
HBT1YDL223C NUP42P49686 430 aaKnown RBP5.3□□□□□ -1.56
HBT1YDL223C MAP2P38174 421 aaKnown RBP5.29□□□□□ -1.56
HBT1YDL223C YNR021WP53723 404 aaKnown RBP5.29□□□□□ -1.56
HBT1YDL223C IES2P40154 320 aa5.28□□□□□ -1.56
HBT1YDL223C GUA1P38625 525 aaKnown RBP5.27□□□□□ -1.57
HBT1YDL223C YFR006WP43590 535 aa5.26□□□□□ -1.57
HBT1YDL223C HSL1P34244 1518 aa5.25□□□□□ -1.57
HBT1YDL223C MAM3Q12296 706 aa5.24□□□□□ -1.57
HBT1YDL223C MIF2P35201 549 aa5.24□□□□□ -1.57
HBT1YDL223C REF2P42073 533 aaPredicted RBP5.23□□□□□ -1.57
HBT1YDL223C SPT6P23615 1451 aaKnown RBP5.22□□□□□ -1.57
HBT1YDL223C AIM7Q12156 149 aa5.22□□□□□ -1.57
HBT1YDL223C HAA1Q12753 694 aaKnown RBP5.22□□□□□ -1.57
HBT1YDL223C DBP1P24784 617 aaKnown RBP5.21□□□□□ -1.58
HBT1YDL223C YMR1P47147 688 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
HBT1YDL223C PTC3P34221 468 aaKnown RBP5.18□□□□□ -1.58
HBT1YDL223C YDR090CQ03193 310 aa5.18□□□□□ -1.58
HBT1YDL223C COX6P00427 148 aa5.17□□□□□ -1.58
HBT1YDL223C NOP53Q12080 455 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms