RNA–Protein interactions for RNA: YJR109C

CPA2, Transcript of Large subunit of carbamoyl phosphate synthetase, yeast

Gene CPA2, Length 3,357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPA2	YJR109C	DRS1	P32892	752 aa	Known RBP	7.01	□□□□□ -1.29
CPA2	YJR109C	TFA1	P36100	482 aa		6.73	□□□□□ -1.33
CPA2	YJR109C	MTC1	P47018	478 aa	Known RBP	6.45	□□□□□ -1.38
CPA2	YJR109C	BFR2	Q06631	534 aa	Known RBP	6.35	□□□□□ -1.39
CPA2	YJR109C	RQC2	Q12532	1038 aa	Known RBP	6.24	□□□□□ -1.41
CPA2	YJR109C	TAF7	Q05021	590 aa		6.13	□□□□□ -1.43
CPA2	YJR109C	AVT3	P36062	692 aa		6.13	□□□□□ -1.43
CPA2	YJR109C	DIP2	Q12220	943 aa	Predicted RBP	5.82	□□□□□ -1.48
CPA2	YJR109C	LEO1	P38439	464 aa		5.77	□□□□□ -1.49
CPA2	YJR109C	DMA1	P38823	416 aa		5.63	□□□□□ -1.51
CPA2	YJR109C	LEU3	P08638	886 aa		5.47	□□□□□ -1.53
CPA2	YJR109C	SAS10	Q12136	610 aa	Predicted RBP	5.45	□□□□□ -1.54
CPA2	YJR109C	RSE1	Q04693	1361 aa	Known RBP	5.27	□□□□□ -1.57
CPA2	YJR109C	IFH1	P39520	1085 aa		5.26	□□□□□ -1.57
CPA2	YJR109C	ABP1	P15891	592 aa	Known RBP	5.25	□□□□□ -1.57
CPA2	YJR109C	RIM101	P33400	625 aa		5.18	□□□□□ -1.58
CPA2	YJR109C	NAP1	P25293	417 aa	Known RBP	5.17	□□□□□ -1.58
CPA2	YJR109C	ORC1	P54784	914 aa	Predicted RBP	5.16	□□□□□ -1.58
CPA2	YJR109C	RPN1	P38764	993 aa	Known RBP	5.16	□□□□□ -1.58
CPA2	YJR109C	RLF2	Q12495	606 aa		5.15	□□□□□ -1.58
CPA2	YJR109C	SSP1	P38871	571 aa		5.12	□□□□□ -1.59
CPA2	YJR109C	DMA2	P53924	522 aa		5.11	□□□□□ -1.59
CPA2	YJR109C	SPT21	P35209	758 aa		5.11	□□□□□ -1.59
CPA2	YJR109C	PTP3	P40048	928 aa		5.09	□□□□□ -1.59
CPA2	YJR109C	CKB1	P43639	278 aa		5.09	□□□□□ -1.59
CPA2	YJR109C	NOP8	Q08287	484 aa	Predicted RBP	5.04	□□□□□ -1.6
CPA2	YJR109C	AIM44	Q99299	758 aa		5.04	□□□□□ -1.6
CPA2	YJR109C	IOC4	Q04213	475 aa		5.01	□□□□□ -1.61
CPA2	YJR109C	YPR148C	Q06523	435 aa		5.01	□□□□□ -1.61
CPA2	YJR109C	ISW2	Q08773	1120 aa		5	□□□□□ -1.61
CPA2	YJR109C	OXP1	P28273	1286 aa		4.98	□□□□□ -1.61
CPA2	YJR109C	YLR271W	Q06152	274 aa		4.95	□□□□□ -1.62
CPA2	YJR109C	RPL17A	P05740	184 aa	Known RBP	4.94	□□□□□ -1.62
CPA2	YJR109C	RPL17B	P46990	184 aa	Known RBP	4.94	□□□□□ -1.62
CPA2	YJR109C	MGA2	P40578	1113 aa		4.93	□□□□□ -1.62
CPA2	YJR109C	DSF2	P38213	736 aa		4.9	□□□□□ -1.62
CPA2	YJR109C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
CPA2	YJR109C	RPG1	P38249	964 aa	Known RBP	4.89	□□□□□ -1.63
CPA2	YJR109C	TOP1	P04786	769 aa		4.86	□□□□□ -1.63
CPA2	YJR109C	AIM7	Q12156	149 aa		4.86	□□□□□ -1.63
CPA2	YJR109C	YNR021W	P53723	404 aa	Known RBP	4.85	□□□□□ -1.63
CPA2	YJR109C	YML020W	Q03722	664 aa		4.85	□□□□□ -1.63
CPA2	YJR109C	PRI1	P10363	409 aa		4.84	□□□□□ -1.63
CPA2	YJR109C	DOS2	P54858	310 aa		4.83	□□□□□ -1.64
CPA2	YJR109C	PSD2	P53037	1138 aa	Known RBP	4.82	□□□□□ -1.64
CPA2	YJR109C	KIN1	P13185	1064 aa		4.81	□□□□□ -1.64
CPA2	YJR109C	MRX12	P47084	519 aa		4.79	□□□□□ -1.64
CPA2	YJR109C	SLX8	P40072	274 aa		4.79	□□□□□ -1.64
CPA2	YJR109C	HPC2	Q01448	625 aa		4.79	□□□□□ -1.64
CPA2	YJR109C	CST9	Q06032	482 aa		4.79	□□□□□ -1.64
CPA2	YJR109C	GEF1	P37020	779 aa		4.78	□□□□□ -1.64
CPA2	YJR109C	MAM3	Q12296	706 aa		4.78	□□□□□ -1.64
CPA2	YJR109C	REB1	P21538	810 aa		4.78	□□□□□ -1.64
CPA2	YJR109C	PAM1	P37304	830 aa	Known RBP	4.78	□□□□□ -1.64
CPA2	YJR109C	SET1	P38827	1080 aa	Known RBP	4.78	□□□□□ -1.64
CPA2	YJR109C	RAM2	P29703	316 aa		4.76	□□□□□ -1.65
CPA2	YJR109C	SSA1	P10591	642 aa	Known RBP	4.76	□□□□□ -1.65
CPA2	YJR109C	HGH1	P48362	394 aa	Known RBP	4.76	□□□□□ -1.65
CPA2	YJR109C	SUB2	Q07478	446 aa	Known RBP	4.76	□□□□□ -1.65
CPA2	YJR109C	URN1	Q06525	465 aa	Known RBP	4.76	□□□□□ -1.65
CPA2	YJR109C	NUP42	P49686	430 aa	Known RBP	4.75	□□□□□ -1.65
CPA2	YJR109C	SPB4	P25808	606 aa	Predicted RBP	4.74	□□□□□ -1.65
CPA2	YJR109C	RSM7	P47150	247 aa		4.74	□□□□□ -1.65
CPA2	YJR109C	ATG36	P46983	293 aa		4.74	□□□□□ -1.65
CPA2	YJR109C	YKR023W	P36119	530 aa	Known RBP	4.73	□□□□□ -1.65
CPA2	YJR109C	GUA1	P38625	525 aa	Known RBP	4.73	□□□□□ -1.65
CPA2	YJR109C	NOP53	Q12080	455 aa	Known RBP	4.73	□□□□□ -1.65
CPA2	YJR109C	YRB30	P53107	440 aa	Predicted RBP	4.73	□□□□□ -1.65
CPA2	YJR109C	SNU71	P53207	620 aa	Known RBP	4.73	□□□□□ -1.65
CPA2	YJR109C	PBS2	P08018	668 aa		4.72	□□□□□ -1.65
CPA2	YJR109C	FAR11	P53917	953 aa		4.71	□□□□□ -1.65
CPA2	YJR109C	SEN54	Q02825	467 aa	Predicted RBP	4.71	□□□□□ -1.65
CPA2	YJR109C	OCA5	P38738	679 aa		4.7	□□□□□ -1.66
CPA2	YJR109C	MAK21	Q12176	1025 aa	Known RBP	4.7	□□□□□ -1.66
CPA2	YJR109C	VPS70	P47161	811 aa		4.7	□□□□□ -1.66
CPA2	YJR109C	YAH1	Q12184	172 aa	Known RBP	4.69	□□□□□ -1.66
CPA2	YJR109C	YTA7	P40340	1379 aa		4.68	□□□□□ -1.66
CPA2	YJR109C	YIL055C	P40523	627 aa	Known RBP	4.68	□□□□□ -1.66
CPA2	YJR109C	MAK11	P20484	414 aa	Known RBP	4.67	□□□□□ -1.66
CPA2	YJR109C	NOP7	P53261	605 aa	Known RBP	4.67	□□□□□ -1.66
CPA2	YJR109C	SWE1	P32944	819 aa		4.66	□□□□□ -1.66
CPA2	YJR109C	GLN1	P32288	370 aa	Known RBP	4.65	□□□□□ -1.66
CPA2	YJR109C	SPC42	P36094	363 aa		4.65	□□□□□ -1.67
CPA2	YJR109C	DIT2	P21595	489 aa		4.64	□□□□□ -1.67
CPA2	YJR109C	HEM3	P28789	327 aa		4.64	□□□□□ -1.67
CPA2	YJR109C	GLC3	P32775	704 aa		4.64	□□□□□ -1.67
CPA2	YJR109C	COX6	P00427	148 aa		4.63	□□□□□ -1.67
CPA2	YJR109C	SSF1	P38789	453 aa	Predicted RBP	4.62	□□□□□ -1.67
CPA2	YJR109C	TFB3	Q03290	321 aa		4.62	□□□□□ -1.67
CPA2	YJR109C	AI2	P03876	854 aa		4.61	□□□□□ -1.67
CPA2	YJR109C	FAP1	P53971	965 aa		4.61	□□□□□ -1.67
CPA2	YJR109C	RRP15	Q06511	250 aa	Predicted RBP	4.61	□□□□□ -1.67
CPA2	YJR109C	TFC8	Q12308	588 aa		4.61	□□□□□ -1.67
CPA2	YJR109C	SLD2	P34252	453 aa		4.6	□□□□□ -1.67
CPA2	YJR109C	RRN6	P32786	894 aa		4.59	□□□□□ -1.67
CPA2	YJR109C	OSW7	P43611	510 aa		4.59	□□□□□ -1.67
CPA2	YJR109C	LAM6	Q08001	693 aa		4.59	□□□□□ -1.67
CPA2	YJR109C	SSA4	P22202	642 aa	Known RBP	4.59	□□□□□ -1.68
CPA2	YJR109C	FPR4	Q06205	392 aa	Predicted RBP	4.58	□□□□□ -1.68
CPA2	YJR109C	ASF1	P32447	279 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms