RNA–Protein interactions for RNA: YBL034C

STU1, Transcript of Component of the mitotic spindle, yeast

Gene STU1, Length 4,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STU1	YBL034C	RQC2	Q12532	1038 aa	Known RBP	5.02	□□□□□ -1.61
STU1	YBL034C	MNN4	P36044	1178 aa		5	□□□□□ -1.61
STU1	YBL034C	SCT1	P32784	759 aa		4.89	□□□□□ -1.63
STU1	YBL034C	QCR6	P00127	147 aa		4.78	□□□□□ -1.64
STU1	YBL034C	CAB3	P36076	571 aa		4.71	□□□□□ -1.66
STU1	YBL034C	NOP2	P40991	618 aa	Known RBP	4.68	□□□□□ -1.66
STU1	YBL034C	BFR2	Q06631	534 aa	Known RBP	4.68	□□□□□ -1.66
STU1	YBL034C	RIX1	P38883	763 aa	Predicted RBP	4.66	□□□□□ -1.66
STU1	YBL034C	TAF7	Q05021	590 aa		4.63	□□□□□ -1.67
STU1	YBL034C	DRS1	P32892	752 aa	Known RBP	4.62	□□□□□ -1.67
STU1	YBL034C	TFA1	P36100	482 aa		4.6	□□□□□ -1.67
STU1	YBL034C	ASF1	P32447	279 aa		4.56	□□□□□ -1.68
STU1	YBL034C	EAF7	P53911	425 aa	Known RBP	4.55	□□□□□ -1.68
STU1	YBL034C	SEC3	P33332	1336 aa	Known RBP	4.55	□□□□□ -1.68
STU1	YBL034C	SKI3	P17883	1432 aa	Known RBP	4.54	□□□□□ -1.68
STU1	YBL034C	FPR3	P38911	411 aa	Known RBP	4.53	□□□□□ -1.68
STU1	YBL034C	FUN12	P39730	1002 aa	Known RBP	4.53	□□□□□ -1.68
STU1	YBL034C	ENP1	P38333	483 aa	Known RBP	4.49	□□□□□ -1.69
STU1	YBL034C	AIM44	Q99299	758 aa		4.47	□□□□□ -1.69
STU1	YBL034C	POL5	P39985	1022 aa	Known RBP	4.46	□□□□□ -1.7
STU1	YBL034C	YPR148C	Q06523	435 aa		4.45	□□□□□ -1.7
STU1	YBL034C	RNA1	P11745	407 aa	Known RBP	4.45	□□□□□ -1.7
STU1	YBL034C	RLP24	Q07915	199 aa	Known RBP	4.45	□□□□□ -1.7
STU1	YBL034C	YRB30	P53107	440 aa	Predicted RBP	4.45	□□□□□ -1.7
STU1	YBL034C	EBP2	P36049	427 aa	Known RBP	4.41	□□□□□ -1.7
STU1	YBL034C	SPA2	P23201	1466 aa	Known RBP	4.4	□□□□□ -1.7
STU1	YBL034C	HSP82	P02829	709 aa	Known RBP	4.4	□□□□□ -1.71
STU1	YBL034C	SAS10	Q12136	610 aa	Predicted RBP	4.37	□□□□□ -1.71
STU1	YBL034C	PAF1	P38351	445 aa		4.37	□□□□□ -1.71
STU1	YBL034C	COG8	Q04632	607 aa		4.36	□□□□□ -1.71
STU1	YBL034C	INO80	P53115	1489 aa		4.36	□□□□□ -1.71
STU1	YBL034C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
STU1	YBL034C	NAP1	P25293	417 aa	Known RBP	4.35	□□□□□ -1.71
STU1	YBL034C	ESC2	Q06340	456 aa		4.34	□□□□□ -1.71
STU1	YBL034C	YFR016C	P43597	1233 aa	Known RBP	4.34	□□□□□ -1.71
STU1	YBL034C	SMC4	Q12267	1418 aa		4.33	□□□□□ -1.72
STU1	YBL034C	CDC11	P32458	415 aa		4.33	□□□□□ -1.72
STU1	YBL034C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
STU1	YBL034C	NOP7	P53261	605 aa	Known RBP	4.31	□□□□□ -1.72
STU1	YBL034C	RPS0B	P46654	252 aa	Known RBP	4.3	□□□□□ -1.72
STU1	YBL034C	RLF2	Q12495	606 aa		4.3	□□□□□ -1.72
STU1	YBL034C	TCB2	P48231	1178 aa		4.3	□□□□□ -1.72
STU1	YBL034C	SGS1	P35187	1447 aa		4.3	□□□□□ -1.72
STU1	YBL034C	YTA6	P40328	754 aa		4.28	□□□□□ -1.72
STU1	YBL034C	SIS2	P36024	562 aa		4.27	□□□□□ -1.73
STU1	YBL034C	ECM16	Q04217	1267 aa	Known RBP	4.27	□□□□□ -1.73
STU1	YBL034C	DEF1	P35732	738 aa	Known RBP	4.27	□□□□□ -1.73
STU1	YBL034C	BTN2	P53286	410 aa		4.25	□□□□□ -1.73
STU1	YBL034C	KRI1	P42846	591 aa	Known RBP	4.25	□□□□□ -1.73
STU1	YBL034C	PLP2	Q12017	286 aa		4.25	□□□□□ -1.73
STU1	YBL034C	NOP58	Q12499	511 aa	Known RBP	4.24	□□□□□ -1.73
STU1	YBL034C	SPP41	P38904	1435 aa		4.24	□□□□□ -1.73
STU1	YBL034C	YTA7	P40340	1379 aa		4.24	□□□□□ -1.73
STU1	YBL034C	YMR124W	P39523	943 aa	Known RBP	4.23	□□□□□ -1.73
STU1	YBL034C	CLC1	P17891	233 aa		4.23	□□□□□ -1.73
STU1	YBL034C	SPB4	P25808	606 aa	Predicted RBP	4.23	□□□□□ -1.73
STU1	YBL034C	ETT1	Q08421	412 aa	Known RBP	4.23	□□□□□ -1.73
STU1	YBL034C	HSC82	P15108	705 aa	Known RBP	4.22	□□□□□ -1.73
STU1	YBL034C	ORC1	P54784	914 aa	Predicted RBP	4.22	□□□□□ -1.73
STU1	YBL034C	SPT6	P23615	1451 aa	Known RBP	4.21	□□□□□ -1.73
STU1	YBL034C	LEO1	P38439	464 aa		4.21	□□□□□ -1.74
STU1	YBL034C	TCD1	P38756	429 aa		4.21	□□□□□ -1.74
STU1	YBL034C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
STU1	YBL034C	DSL1	P53847	754 aa		4.2	□□□□□ -1.74
STU1	YBL034C	TPM1	P17536	199 aa	Known RBP	4.19	□□□□□ -1.74
STU1	YBL034C	NST1	P53935	1240 aa		4.19	□□□□□ -1.74
STU1	YBL034C	CHD1	P32657	1468 aa		4.19	□□□□□ -1.74
STU1	YBL034C	TCB3	Q03640	1545 aa	Known RBP	4.19	□□□□□ -1.74
STU1	YBL034C	RKM3	P38222	552 aa		4.19	□□□□□ -1.74
STU1	YBL034C	RPP0	P05317	312 aa	Known RBP	4.19	□□□□□ -1.74
STU1	YBL034C	FPR4	Q06205	392 aa	Predicted RBP	4.19	□□□□□ -1.74
STU1	YBL034C	RPS0A	P32905	252 aa	Known RBP	4.18	□□□□□ -1.74
STU1	YBL034C	AVT3	P36062	692 aa		4.18	□□□□□ -1.74
STU1	YBL034C	MSH4	P40965	878 aa	Predicted RBP	4.17	□□□□□ -1.74
STU1	YBL034C	SWR1	Q05471	1514 aa		4.17	□□□□□ -1.74
STU1	YBL034C	SSN2	P38931	1420 aa		4.16	□□□□□ -1.74
STU1	YBL034C	NOP8	Q08287	484 aa	Predicted RBP	4.16	□□□□□ -1.74
STU1	YBL034C	SEG2	P34250	1132 aa		4.16	□□□□□ -1.74
STU1	YBL034C	SQT1	P35184	431 aa		4.16	□□□□□ -1.74
STU1	YBL034C	EFB1	P32471	206 aa	Known RBP	4.16	□□□□□ -1.74
STU1	YBL034C	VPS24	P36095	224 aa	Known RBP	4.16	□□□□□ -1.74
STU1	YBL034C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
STU1	YBL034C	TPM2	P40414	161 aa		4.16	□□□□□ -1.74
STU1	YBL034C	CDC45	Q08032	650 aa		4.16	□□□□□ -1.74
STU1	YBL034C	RNT1	Q02555	471 aa		4.15	□□□□□ -1.74
STU1	YBL034C	SET2	P46995	733 aa	Known RBP	4.15	□□□□□ -1.75
STU1	YBL034C	SMC3	P47037	1230 aa		4.15	□□□□□ -1.75
STU1	YBL034C	HUL5	P53119	910 aa		4.15	□□□□□ -1.75
STU1	YBL034C	SPT2	P06843	333 aa	Predicted RBP	4.15	□□□□□ -1.75
STU1	YBL034C	PRT1	P06103	763 aa	Known RBP	4.14	□□□□□ -1.75
STU1	YBL034C	TAF13	P11747	167 aa		4.14	□□□□□ -1.75
STU1	YBL034C	SPC110	P32380	944 aa		4.14	□□□□□ -1.75
STU1	YBL034C	DOS2	P54858	310 aa		4.14	□□□□□ -1.75
STU1	YBL034C	ARD1	P07347	238 aa	Predicted RBP	4.13	□□□□□ -1.75
STU1	YBL034C	BUD4	P47136	1447 aa		4.13	□□□□□ -1.75
STU1	YBL034C	PAN1	P32521	1480 aa		4.13	□□□□□ -1.75
STU1	YBL034C	PET123	P17558	318 aa		4.13	□□□□□ -1.75
STU1	YBL034C	DEP1	P31385	405 aa		4.13	□□□□□ -1.75
STU1	YBL034C	NMD2	P38798	1089 aa	Known RBP	4.13	□□□□□ -1.75
STU1	YBL034C	TAF2	P23255	1407 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms