RNA–Protein interactions for RNA: YOL147C

PEX11, Transcript of Peroxisomal protein required for medium-chain fatty acid oxidation, yeastyeast

Gene PEX11, Length 711 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX11YOL147C MTC1P47018 478 aaKnown RBP9.49□□□□□ -0.89
PEX11YOL147C FAP1P53971 965 aa9.06□□□□□ -0.96
PEX11YOL147C DRS1P32892 752 aaKnown RBP8.52□□□□□ -1.05
PEX11YOL147C PRY3P47033 881 aa8.52□□□□□ -1.05
PEX11YOL147C PRI1P10363 409 aa8.23□□□□□ -1.09
PEX11YOL147C AAD16Q02895 342 aa8.23□□□□□ -1.09
PEX11YOL147C YCK3P39962 524 aa8.01□□□□□ -1.13
PEX11YOL147C ISW2Q08773 1120 aa7.95□□□□□ -1.14
PEX11YOL147C RPG1P38249 964 aaKnown RBP7.92□□□□□ -1.14
PEX11YOL147C HAA1Q12753 694 aaKnown RBP7.91□□□□□ -1.14
PEX11YOL147C TSR3Q12094 313 aaKnown RBP7.81□□□□□ -1.16
PEX11YOL147C DIP2Q12220 943 aaPredicted RBP7.6□□□□□ -1.19
PEX11YOL147C MRPL32P25348 183 aa7.47□□□□□ -1.21
PEX11YOL147C RSE1Q04693 1361 aaKnown RBP7.44□□□□□ -1.22
PEX11YOL147C RPL17AP05740 184 aaKnown RBP7.26□□□□□ -1.25
PEX11YOL147C REB1P21538 810 aa7.26□□□□□ -1.25
PEX11YOL147C RPL17BP46990 184 aaKnown RBP7.26□□□□□ -1.25
PEX11YOL147C YGL015CP33199 130 aa7.24□□□□□ -1.25
PEX11YOL147C AVT3P36062 692 aa7.18□□□□□ -1.26
PEX11YOL147C BFR2Q06631 534 aaKnown RBP7.16□□□□□ -1.26
PEX11YOL147C CDC27P38042 758 aa7.04□□□□□ -1.28
PEX11YOL147C YKR023WP36119 530 aaKnown RBP6.91□□□□□ -1.3
PEX11YOL147C SPT21P35209 758 aa6.87□□□□□ -1.31
PEX11YOL147C MAP2P38174 421 aaKnown RBP6.87□□□□□ -1.31
PEX11YOL147C UBP10P53874 792 aaPredicted RBP6.82□□□□□ -1.32
PEX11YOL147C DCD1P06773 312 aa6.81□□□□□ -1.32
PEX11YOL147C HOP09932 586 aa6.81□□□□□ -1.32
PEX11YOL147C BUD31P25337 157 aaPredicted RBP6.8□□□□□ -1.32
PEX11YOL147C TFC8Q12308 588 aa6.76□□□□□ -1.33
PEX11YOL147C SCY1P53009 804 aa6.66□□□□□ -1.34
PEX11YOL147C TFA1P36100 482 aa6.58□□□□□ -1.36
PEX11YOL147C SLX5P32828 619 aaKnown RBP6.57□□□□□ -1.36
PEX11YOL147C TIF4632P39936 914 aaKnown RBP6.57□□□□□ -1.36
PEX11YOL147C RIM101P33400 625 aa6.55□□□□□ -1.36
PEX11YOL147C BCH2P36122 765 aa6.54□□□□□ -1.36
PEX11YOL147C TGL3P40308 642 aa6.53□□□□□ -1.36
PEX11YOL147C SIS1P25294 352 aaKnown RBP6.47□□□□□ -1.37
PEX11YOL147C UBP9P39967 754 aa6.46□□□□□ -1.38
PEX11YOL147C OXP1P28273 1286 aa6.34□□□□□ -1.39
PEX11YOL147C EPS1P40557 701 aa6.34□□□□□ -1.39
PEX11YOL147C BDF1P35817 686 aa6.33□□□□□ -1.4
PEX11YOL147C PTP3P40048 928 aa6.28□□□□□ -1.4
PEX11YOL147C RQC2Q12532 1038 aaKnown RBP6.28□□□□□ -1.4
PEX11YOL147C YIL055CP40523 627 aaKnown RBP6.26□□□□□ -1.41
PEX11YOL147C YBL029C-AQ3E756 94 aa6.23□□□□□ -1.41
PEX11YOL147C MST1P07236 462 aa6.19□□□□□ -1.42
PEX11YOL147C YOR238WQ08634 303 aa6.19□□□□□ -1.42
PEX11YOL147C RSM7P47150 247 aa6.15□□□□□ -1.42
PEX11YOL147C YAH1Q12184 172 aaKnown RBP6.15□□□□□ -1.42
PEX11YOL147C BBC1P47068 1157 aa6.14□□□□□ -1.43
PEX11YOL147C AI2P03876 854 aa6.13□□□□□ -1.43
PEX11YOL147C TAF7Q05021 590 aa6.13□□□□□ -1.43
PEX11YOL147C VNX1P42839 908 aa6.12□□□□□ -1.43
PEX11YOL147C WSC3Q12215 556 aa6.1□□□□□ -1.43
PEX11YOL147C YAP5P40574 245 aa6.09□□□□□ -1.43
PEX11YOL147C NSR1P27476 414 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
PEX11YOL147C SPP1Q03012 353 aa6.07□□□□□ -1.44
PEX11YOL147C GTT3P39996 337 aa5.99□□□□□ -1.45
PEX11YOL147C YLR271WQ06152 274 aa5.99□□□□□ -1.45
PEX11YOL147C PIB1Q06651 286 aa5.98□□□□□ -1.45
PEX11YOL147C TIF11P38912 153 aaKnown RBP5.96□□□□□ -1.46
PEX11YOL147C AIR2Q12476 344 aaKnown RBP5.96□□□□□ -1.46
PEX11YOL147C YJL171CP46992 396 aa5.94□□□□□ -1.46
PEX11YOL147C FKH1P40466 484 aa5.92□□□□□ -1.46
PEX11YOL147C MRM1P25270 412 aa5.91□□□□□ -1.46
PEX11YOL147C PSD2P53037 1138 aaKnown RBP5.91□□□□□ -1.46
PEX11YOL147C ULI1P43604 169 aa5.89□□□□□ -1.47
PEX11YOL147C LDB19Q12502 818 aa5.89□□□□□ -1.47
PEX11YOL147C IOC2Q12072 812 aa5.86□□□□□ -1.47
PEX11YOL147C SSP1P38871 571 aa5.85□□□□□ -1.47
PEX11YOL147C BMT6Q12291 365 aa5.81□□□□□ -1.48
PEX11YOL147C SET4P42948 560 aa5.8□□□□□ -1.48
PEX11YOL147C YFR006WP43590 535 aa5.78□□□□□ -1.48
PEX11YOL147C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PEX11YOL147C DBP1P24784 617 aaKnown RBP5.77□□□□□ -1.49
PEX11YOL147C CST9Q06032 482 aa5.77□□□□□ -1.49
PEX11YOL147C YOL036WQ08206 761 aa5.77□□□□□ -1.49
PEX11YOL147C MSB4Q12317 492 aa5.77□□□□□ -1.49
PEX11YOL147C RTG1P32607 177 aa5.76□□□□□ -1.49
PEX11YOL147C EAP1P36041 632 aaKnown RBP5.76□□□□□ -1.49
PEX11YOL147C VPS29P38759 282 aa5.76□□□□□ -1.49
PEX11YOL147C TRP5P00931 707 aaKnown RBP5.75□□□□□ -1.49
PEX11YOL147C YMR1P47147 688 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
PEX11YOL147C DMA1P38823 416 aa5.73□□□□□ -1.49
PEX11YOL147C NCR1Q12200 1170 aa5.73□□□□□ -1.49
PEX11YOL147C RTG3P38165 486 aa5.72□□□□□ -1.49
PEX11YOL147C STS1P38637 319 aa5.72□□□□□ -1.49
PEX11YOL147C VMA1P17255 1071 aaKnown RBP5.71□□□□□ -1.5
PEX11YOL147C RCR1P38212 213 aa5.68□□□□□ -1.5
PEX11YOL147C MGA2P40578 1113 aa5.68□□□□□ -1.5
PEX11YOL147C YNL035CP53962 389 aaKnown RBP5.68□□□□□ -1.5
PEX11YOL147C SEC61P32915 480 aa5.65□□□□□ -1.5
PEX11YOL147C SAM3Q08986 587 aa5.65□□□□□ -1.5
PEX11YOL147C SAP30P38429 201 aa5.61□□□□□ -1.51
PEX11YOL147C TFG1P41895 735 aaPredicted RBP5.61□□□□□ -1.51
PEX11YOL147C DAN4P47179 1161 aa5.59□□□□□ -1.51
PEX11YOL147C GYP5Q12344 894 aa5.59□□□□□ -1.51
PEX11YOL147C DCW1P36091 449 aa5.58□□□□□ -1.52
PEX11YOL147C LEO1P38439 464 aa5.56□□□□□ -1.52
PEX11YOL147C JIP4Q03361 876 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms