Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 AC011484.1-201ENST00000377652 1995 ntBASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRGV1A0A0A0MS02 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 RARRES2P11-201ENST00000635158 484 ntBASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 AL157384.1-201ENST00000445995 2473 ntBASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.82□□□□□ -0.04
TRGV1A0A0A0MS02 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 UBE2DNL-204ENST00000602536 740 ntBASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.81□□□□□ -0.04
TRGV1A0A0A0MS02 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 FP700111.2-201ENST00000619190 1892 ntBASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms