RNA–Protein interactions for RNA: ENST00000561457.2

TMEM250-205, Transcript of transmembrane protein 250, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM250, Length 2,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-205ENST00000561457 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
TMEM250-205ENST00000561457 SHROOM4Q9ULL8 1493 aa36.27■■■■□ 3.4
TMEM250-205ENST00000561457 SUPT5HO00267 1087 aaKnown RBP35.73■■■■□ 3.31
TMEM250-205ENST00000561457 ZCCHC6Q5VYS8 1495 aaKnown RBP35.15■■■■□ 3.22
TMEM250-205ENST00000561457 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
TMEM250-205ENST00000561457 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.17
TMEM250-205ENST00000561457 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
TMEM250-205ENST00000561457 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
TMEM250-205ENST00000561457 HRCP23327 699 aa34.22■■■■□ 3.07
TMEM250-205ENST00000561457 PCGF6Q9BYE7 350 aa34.18■■■■□ 3.06
TMEM250-205ENST00000561457 LOC105371045A0A1W2PR82 267 aa33.92■■■■□ 3.02
TMEM250-205ENST00000561457 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
TMEM250-205ENST00000561457 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
TMEM250-205ENST00000561457 ABCC9O60706 1549 aa33.22■■■□□ 2.91
TMEM250-205ENST00000561457 TRIM26Q12899 539 aaPredicted RBP33.19■■■□□ 2.9
TMEM250-205ENST00000561457 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
TMEM250-205ENST00000561457 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
TMEM250-205ENST00000561457 FAM9AQ8IZU1 332 aaPredicted RBP33.1■■■□□ 2.89
TMEM250-205ENST00000561457 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
TMEM250-205ENST00000561457 EHMT2Q96KQ7 1210 aa33.05■■■□□ 2.88
TMEM250-205ENST00000561457 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
TMEM250-205ENST00000561457 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
TMEM250-205ENST00000561457 ZEB1P37275 1124 aaPredicted RBP32.46■■■□□ 2.79
TMEM250-205ENST00000561457 MROH2BQ7Z745 1585 aa32.45■■■□□ 2.79
TMEM250-205ENST00000561457 WIZO95785 1651 aa32.29■■■□□ 2.76
TMEM250-205ENST00000561457 NACADO15069 1562 aa32.24■■■□□ 2.75
TMEM250-205ENST00000561457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.06■■■□□ 2.72
TMEM250-205ENST00000561457 TTBK1Q5TCY1 1321 aaPredicted RBP32.02■■■□□ 2.72
TMEM250-205ENST00000561457 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
TMEM250-205ENST00000561457 CCER1Q8TC90 406 aaPredicted RBP31.9■■■□□ 2.7
TMEM250-205ENST00000561457 SCAF1Q9H7N4 1312 aaKnown RBP31.9■■■□□ 2.7
TMEM250-205ENST00000561457 ABCC8Q09428 1581 aa31.82■■■□□ 2.68
TMEM250-205ENST00000561457 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
TMEM250-205ENST00000561457 CCDC88BA6NC98 1476 aa31.76■■■□□ 2.68
TMEM250-205ENST00000561457 SOGA1O94964 1423 aa31.63■■■□□ 2.65
TMEM250-205ENST00000561457 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
TMEM250-205ENST00000561457 CEP162Q5TB80 1403 aa31.56■■■□□ 2.64
TMEM250-205ENST00000561457 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
TMEM250-205ENST00000561457 UBTFP17480 764 aaKnown RBP31.52■■■□□ 2.64
TMEM250-205ENST00000561457 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
TMEM250-205ENST00000561457 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
TMEM250-205ENST00000561457 CSRNP3Q8WYN3 585 aa31.43■■■□□ 2.62
TMEM250-205ENST00000561457 DIEXFQ68CQ4 756 aaKnown RBP31.42■■■□□ 2.62
TMEM250-205ENST00000561457 WRNQ14191 1432 aaPredicted RBP eCLIP31.42■■■□□ 2.62
TMEM250-205ENST00000561457 NEUROD1Q13562 356 aa31.42■■■□□ 2.62
TMEM250-205ENST00000561457 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
TMEM250-205ENST00000561457 TNIKQ9UKE5 1360 aa31.37■■■□□ 2.61
TMEM250-205ENST00000561457 ACIN1Q9UKV3 1341 aaKnown RBP31.36■■■□□ 2.61
TMEM250-205ENST00000561457 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
TMEM250-205ENST00000561457 PELP1Q8IZL8 1130 aaKnown RBP31.26■■■□□ 2.59
TMEM250-205ENST00000561457 EEA1Q15075 1411 aa31.15■■■□□ 2.58
TMEM250-205ENST00000561457 HNRNPUL2Q1KMD3 747 aaKnown RBP31.14■■■□□ 2.58
TMEM250-205ENST00000561457 GTF3C3Q9Y5Q9 886 aa31.14■■■□□ 2.58
TMEM250-205ENST00000561457 GOLGA3Q08378 1498 aa31.12■■■□□ 2.57
TMEM250-205ENST00000561457 RANGAP1P46060 587 aaPredicted RBP31.11■■■□□ 2.57
TMEM250-205ENST00000561457 CENPBP07199 599 aaPredicted RBP31.05■■■□□ 2.56
TMEM250-205ENST00000561457 ZNF316A6NFI3 1004 aaPredicted RBP31.02■■■□□ 2.56
TMEM250-205ENST00000561457 YTHDC1Q96MU7 727 aaKnown RBP30.97■■■□□ 2.55
TMEM250-205ENST00000561457 SYNJ1O43426 1573 aa30.94■■■□□ 2.54
TMEM250-205ENST00000561457 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
TMEM250-205ENST00000561457 CLIP1P30622 1438 aa30.9■■■□□ 2.54
TMEM250-205ENST00000561457 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
TMEM250-205ENST00000561457 APLP2Q06481 763 aa30.79■■■□□ 2.52
TMEM250-205ENST00000561457 RAPGEF2Q9Y4G8 1499 aa30.78■■■□□ 2.52
TMEM250-205ENST00000561457 MIER1Q8N108 512 aa30.78■■■□□ 2.52
TMEM250-205ENST00000561457 VPS8Q8N3P4 1428 aa30.72■■■□□ 2.51
TMEM250-205ENST00000561457 KIF21BO75037 1637 aa30.72■■■□□ 2.51
TMEM250-205ENST00000561457 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
TMEM250-205ENST00000561457 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
TMEM250-205ENST00000561457 BAZ1BQ9UIG0 1483 aaKnown RBP30.68■■■□□ 2.5
TMEM250-205ENST00000561457 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
TMEM250-205ENST00000561457 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
TMEM250-205ENST00000561457 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
TMEM250-205ENST00000561457 DHX57Q6P158 1386 aaKnown RBP30.3■■■□□ 2.44
TMEM250-205ENST00000561457 PRXQ9BXM0 1461 aa30.26■■■□□ 2.43
TMEM250-205ENST00000561457 ITGAEP38570 1179 aa30.26■■■□□ 2.43
TMEM250-205ENST00000561457 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
TMEM250-205ENST00000561457 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
TMEM250-205ENST00000561457 CUX1P39880 1505 aa30.14■■■□□ 2.42
TMEM250-205ENST00000561457 CLSPNQ9HAW4 1339 aa30.08■■■□□ 2.41
TMEM250-205ENST00000561457 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
TMEM250-205ENST00000561457 RRBP1Q9P2E9 1410 aaKnown RBP30.01■■■□□ 2.39
TMEM250-205ENST00000561457 CCNB3Q8WWL7 1395 aa29.99■■■□□ 2.39
TMEM250-205ENST00000561457 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
TMEM250-205ENST00000561457 NCAPD3P42695 1498 aa29.94■■■□□ 2.38
TMEM250-205ENST00000561457 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
TMEM250-205ENST00000561457 CFTRP13569 1480 aa29.86■■■□□ 2.37
TMEM250-205ENST00000561457 KCNH8Q96L42 1107 aa29.85■■■□□ 2.37
TMEM250-205ENST00000561457 RAB3GAP2Q9H2M9 1393 aa29.84■■■□□ 2.37
TMEM250-205ENST00000561457 SUPT16HQ9Y5B9 1047 aaKnown RBP29.83■■■□□ 2.37
TMEM250-205ENST00000561457 CUX2O14529 1486 aa29.82■■■□□ 2.36
TMEM250-205ENST00000561457 P3H3Q8IVL6 736 aa29.81■■■□□ 2.36
TMEM250-205ENST00000561457 IGF1RP08069 1367 aa29.8■■■□□ 2.36
TMEM250-205ENST00000561457 ATP1B4Q9UN42 357 aaPredicted RBP29.79■■■□□ 2.36
TMEM250-205ENST00000561457 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
TMEM250-205ENST00000561457 SIN3AQ96ST3 1273 aa29.73■■■□□ 2.35
TMEM250-205ENST00000561457 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
TMEM250-205ENST00000561457 MAPKBP1O60336 1514 aa29.68■■■□□ 2.34
TMEM250-205ENST00000561457 PHLDB1Q86UU1 1377 aa29.67■■■□□ 2.34
TMEM250-205ENST00000561457 TIAM1Q13009 1591 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms