RNA–Protein interactions for RNA: ENST00000298288.10

LRR1-201, Transcript of leucine rich repeat protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRR1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-201ENST00000298288 NISCHQ9Y2I1 1504 aa43.9■■■■■ 4.62
LRR1-201ENST00000298288 CCDC180Q9P1Z9 1646 aa37.82■■■■□ 3.65
LRR1-201ENST00000298288 ZCCHC6Q5VYS8 1495 aaKnown RBP37.1■■■■□ 3.53
LRR1-201ENST00000298288 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
LRR1-201ENST00000298288 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.39
LRR1-201ENST00000298288 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
LRR1-201ENST00000298288 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
LRR1-201ENST00000298288 MYO15BQ96JP2 1530 aa35.39■■■■□ 3.26
LRR1-201ENST00000298288 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
LRR1-201ENST00000298288 ABCC9O60706 1549 aa34.98■■■■□ 3.19
LRR1-201ENST00000298288 NACADO15069 1562 aa34.92■■■■□ 3.18
LRR1-201ENST00000298288 CHIC1Q5VXU3 224 aa34.78■■■■□ 3.16
LRR1-201ENST00000298288 RSF1Q96T23 1441 aaPredicted RBP34.46■■■■□ 3.11
LRR1-201ENST00000298288 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
LRR1-201ENST00000298288 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
LRR1-201ENST00000298288 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
LRR1-201ENST00000298288 UNC13AQ9UPW8 1703 aa33.89■■■■□ 3.02
LRR1-201ENST00000298288 WIZO95785 1651 aa33.84■■■■□ 3.01
LRR1-201ENST00000298288 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
LRR1-201ENST00000298288 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
LRR1-201ENST00000298288 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
LRR1-201ENST00000298288 TRIM41Q8WV44 630 aa33.51■■■□□ 2.96
LRR1-201ENST00000298288 TOP2AP11388 1531 aaKnown RBP33.45■■■□□ 2.95
LRR1-201ENST00000298288 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
LRR1-201ENST00000298288 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
LRR1-201ENST00000298288 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
LRR1-201ENST00000298288 PCGF6Q9BYE7 350 aa33.14■■■□□ 2.9
LRR1-201ENST00000298288 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
LRR1-201ENST00000298288 HRCP23327 699 aa33.07■■■□□ 2.88
LRR1-201ENST00000298288 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
LRR1-201ENST00000298288 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
LRR1-201ENST00000298288 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
LRR1-201ENST00000298288 TRIM26Q12899 539 aaPredicted RBP32.84■■■□□ 2.85
LRR1-201ENST00000298288 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
LRR1-201ENST00000298288 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
LRR1-201ENST00000298288 BAZ1BQ9UIG0 1483 aaKnown RBP32.6■■■□□ 2.81
LRR1-201ENST00000298288 EHMT2Q96KQ7 1210 aa32.54■■■□□ 2.8
LRR1-201ENST00000298288 EEA1Q15075 1411 aa32.5■■■□□ 2.79
LRR1-201ENST00000298288 WRNQ14191 1432 aaPredicted RBP eCLIP32.41■■■□□ 2.78
LRR1-201ENST00000298288 SOGA1O94964 1423 aa32.39■■■□□ 2.77
LRR1-201ENST00000298288 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
LRR1-201ENST00000298288 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
LRR1-201ENST00000298288 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
LRR1-201ENST00000298288 TNIKQ9UKE5 1360 aa32.23■■■□□ 2.75
LRR1-201ENST00000298288 CSRNP3Q8WYN3 585 aa32.22■■■□□ 2.75
LRR1-201ENST00000298288 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
LRR1-201ENST00000298288 CEP162Q5TB80 1403 aa32.16■■■□□ 2.74
LRR1-201ENST00000298288 PPARGC1BQ86YN6 1023 aaKnown RBP32.16■■■□□ 2.74
LRR1-201ENST00000298288 GOLGA3Q08378 1498 aa32.15■■■□□ 2.74
LRR1-201ENST00000298288 ZEB1P37275 1124 aaPredicted RBP32.1■■■□□ 2.73
LRR1-201ENST00000298288 KIF21BO75037 1637 aa32.1■■■□□ 2.73
LRR1-201ENST00000298288 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
LRR1-201ENST00000298288 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
LRR1-201ENST00000298288 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
LRR1-201ENST00000298288 UBTFP17480 764 aaKnown RBP31.94■■■□□ 2.7
LRR1-201ENST00000298288 PRDM2Q13029 1718 aa31.87■■■□□ 2.69
LRR1-201ENST00000298288 CFTRP13569 1480 aa31.79■■■□□ 2.68
LRR1-201ENST00000298288 CUX1P39880 1505 aa31.72■■■□□ 2.67
LRR1-201ENST00000298288 RAPGEF2Q9Y4G8 1499 aa31.68■■■□□ 2.66
LRR1-201ENST00000298288 CLIP1P30622 1438 aa31.66■■■□□ 2.66
LRR1-201ENST00000298288 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
LRR1-201ENST00000298288 CC2D2AQ9P2K1 1620 aa31.55■■■□□ 2.64
LRR1-201ENST00000298288 PRXQ9BXM0 1461 aa31.54■■■□□ 2.64
LRR1-201ENST00000298288 VPS8Q8N3P4 1428 aa31.53■■■□□ 2.64
LRR1-201ENST00000298288 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
LRR1-201ENST00000298288 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
LRR1-201ENST00000298288 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
LRR1-201ENST00000298288 CCER1Q8TC90 406 aaPredicted RBP31.39■■■□□ 2.62
LRR1-201ENST00000298288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.38■■■□□ 2.61
LRR1-201ENST00000298288 APLP2Q06481 763 aa31.25■■■□□ 2.59
LRR1-201ENST00000298288 ARAP1Q96P48 1450 aa31.24■■■□□ 2.59
LRR1-201ENST00000298288 CUX2O14529 1486 aa31.2■■■□□ 2.58
LRR1-201ENST00000298288 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
LRR1-201ENST00000298288 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
LRR1-201ENST00000298288 RANGAP1P46060 587 aaPredicted RBP31.15■■■□□ 2.58
LRR1-201ENST00000298288 DNMBPQ6XZF7 1577 aa31.1■■■□□ 2.57
LRR1-201ENST00000298288 IGF1RP08069 1367 aa31.07■■■□□ 2.57
LRR1-201ENST00000298288 ARHGAP35Q9NRY4 1499 aa31.01■■■□□ 2.56
LRR1-201ENST00000298288 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
LRR1-201ENST00000298288 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
LRR1-201ENST00000298288 TOPBP1Q92547 1522 aa30.95■■■□□ 2.55
LRR1-201ENST00000298288 HNRNPUL2Q1KMD3 747 aaKnown RBP30.92■■■□□ 2.54
LRR1-201ENST00000298288 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
LRR1-201ENST00000298288 NESP48681 1621 aa30.92■■■□□ 2.54
LRR1-201ENST00000298288 POLA1P09884 1462 aaPredicted RBP30.87■■■□□ 2.53
LRR1-201ENST00000298288 CUL7Q14999 1698 aa30.84■■■□□ 2.53
LRR1-201ENST00000298288 WDR97A6NE52 1622 aa30.82■■■□□ 2.52
LRR1-201ENST00000298288 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
LRR1-201ENST00000298288 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
LRR1-201ENST00000298288 KANK4Q5T7N3 995 aaPredicted RBP30.78■■■□□ 2.52
LRR1-201ENST00000298288 RRBP1Q9P2E9 1410 aaKnown RBP30.76■■■□□ 2.52
LRR1-201ENST00000298288 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
LRR1-201ENST00000298288 TIAM1Q13009 1591 aa30.72■■■□□ 2.51
LRR1-201ENST00000298288 CTTNBP2Q8WZ74 1663 aa30.72■■■□□ 2.51
LRR1-201ENST00000298288 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
LRR1-201ENST00000298288 CFAP43Q8NDM7 1665 aa30.65■■■□□ 2.5
LRR1-201ENST00000298288 FHAD1B1AJZ9 1412 aa30.65■■■□□ 2.5
LRR1-201ENST00000298288 EFCAB5A4FU69 1503 aa30.64■■■□□ 2.5
LRR1-201ENST00000298288 ABCA5Q8WWZ7 1642 aa30.63■■■□□ 2.49
LRR1-201ENST00000298288 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms