Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.32■■□□□ 1
RFX6Q8HWS3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.32■■□□□ 1
RFX6Q8HWS3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.32■■□□□ 1
RFX6Q8HWS3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RFX6Q8HWS3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.32■■□□□ 1
RFX6Q8HWS3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RFX6Q8HWS3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.31■■□□□ 1
RFX6Q8HWS3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.31■■□□□ 1
RFX6Q8HWS3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.31■■□□□ 1
RFX6Q8HWS3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RFX6Q8HWS3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
RFX6Q8HWS3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX6Q8HWS3 AC116050.2-201ENST00000612102 1779 ntBASIC21.31■■□□□ 1
RFX6Q8HWS3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.3■■□□□ 1
RFX6Q8HWS3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RFX6Q8HWS3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.3■■□□□ 1
RFX6Q8HWS3 AC020907.5-201ENST00000624372 1936 ntBASIC21.3■■□□□ 1
RFX6Q8HWS3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.3■■□□□ 1
RFX6Q8HWS3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.3■■□□□ 1
RFX6Q8HWS3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RFX6Q8HWS3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RFX6Q8HWS3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.3■■□□□ 1
RFX6Q8HWS3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.29■■□□□ 1
RFX6Q8HWS3 SLC25A24-204ENST00000569674 2357 ntBASIC21.29■■□□□ 1
RFX6Q8HWS3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.29■■□□□ 1
RFX6Q8HWS3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.29■■□□□ 1
RFX6Q8HWS3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.29■■□□□ 1
RFX6Q8HWS3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.29■■□□□ 1
RFX6Q8HWS3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX6Q8HWS3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RFX6Q8HWS3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFX6Q8HWS3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.28■■□□□ 1
RFX6Q8HWS3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.28■■□□□ 1
RFX6Q8HWS3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.28■■□□□ 1
RFX6Q8HWS3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
RFX6Q8HWS3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.28■■□□□ 1
RFX6Q8HWS3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.28■■□□□ 1
RFX6Q8HWS3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFX6Q8HWS3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.28■■□□□ 1
RFX6Q8HWS3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.28■■□□□ 1
RFX6Q8HWS3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 RBM17P2-201ENST00000616397 1405 ntBASIC21.28■■□□□ 1
RFX6Q8HWS3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RFX6Q8HWS3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX6Q8HWS3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RFX6Q8HWS3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX6Q8HWS3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RFX6Q8HWS3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RFX6Q8HWS3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX6Q8HWS3 AC034268.1-201ENST00000441047 882 ntBASIC21.27■■□□□ 1
RFX6Q8HWS3 NTF6G-201ENST00000591094 616 ntBASIC21.27■■□□□ 1
RFX6Q8HWS3 UBE2DNL-204ENST00000602536 740 ntBASIC21.27■■□□□ 1
RFX6Q8HWS3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX6Q8HWS3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
RFX6Q8HWS3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.27■■□□□ 1
RFX6Q8HWS3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.27■■□□□ 1
RFX6Q8HWS3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.27■□□□□ 0.99
RFX6Q8HWS3 AC019069.1-201ENST00000610008 1333 ntBASIC21.27■□□□□ 0.99
RFX6Q8HWS3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.27■□□□□ 0.99
RFX6Q8HWS3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms