RNA–Protein interactions for RNA: ENST00000574730.5

PKMYT1-216, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2 BASIC

Gene PKMYT1, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-216ENST00000574730 NISCHQ9Y2I1 1504 aa47.22■■■■■ 5.15
PKMYT1-216ENST00000574730 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
PKMYT1-216ENST00000574730 ZCCHC6Q5VYS8 1495 aaKnown RBP39.6■■■■□ 3.93
PKMYT1-216ENST00000574730 ABCC9O60706 1549 aa39.36■■■■□ 3.89
PKMYT1-216ENST00000574730 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
PKMYT1-216ENST00000574730 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.85
PKMYT1-216ENST00000574730 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.79
PKMYT1-216ENST00000574730 NACADO15069 1562 aa38.61■■■■□ 3.77
PKMYT1-216ENST00000574730 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
PKMYT1-216ENST00000574730 SHROOM4Q9ULL8 1493 aa38.21■■■■□ 3.71
PKMYT1-216ENST00000574730 SCRIBQ14160 1630 aa37.93■■■■□ 3.66
PKMYT1-216ENST00000574730 UNC13AQ9UPW8 1703 aa37.52■■■■□ 3.6
PKMYT1-216ENST00000574730 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
PKMYT1-216ENST00000574730 PABPN1Q86U42 306 aaKnown RBP eCLIP37.05■■■■□ 3.52
PKMYT1-216ENST00000574730 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
PKMYT1-216ENST00000574730 SUPT5HO00267 1087 aaKnown RBP36.63■■■■□ 3.45
PKMYT1-216ENST00000574730 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
PKMYT1-216ENST00000574730 RSF1Q96T23 1441 aaPredicted RBP36.5■■■■□ 3.43
PKMYT1-216ENST00000574730 MROH2BQ7Z745 1585 aa36.45■■■■□ 3.43
PKMYT1-216ENST00000574730 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
PKMYT1-216ENST00000574730 WIZO95785 1651 aa36.12■■■■□ 3.37
PKMYT1-216ENST00000574730 EIF4G1Q04637 1599 aaKnown RBP36.08■■■■□ 3.37
PKMYT1-216ENST00000574730 PEG3Q9GZU2 1588 aa35.96■■■■□ 3.35
PKMYT1-216ENST00000574730 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
PKMYT1-216ENST00000574730 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
PKMYT1-216ENST00000574730 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.32
PKMYT1-216ENST00000574730 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
PKMYT1-216ENST00000574730 NCAPD3P42695 1498 aa35.63■■■■□ 3.29
PKMYT1-216ENST00000574730 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
PKMYT1-216ENST00000574730 HMGXB3Q12766 1538 aa35.54■■■■□ 3.28
PKMYT1-216ENST00000574730 CCDC88BA6NC98 1476 aa35.39■■■■□ 3.26
PKMYT1-216ENST00000574730 DNAJC5BQ9UF47 199 aa35.02■■■■□ 3.2
PKMYT1-216ENST00000574730 CHIC1Q5VXU3 224 aa34.9■■■■□ 3.18
PKMYT1-216ENST00000574730 CFTRP13569 1480 aa34.74■■■■□ 3.15
PKMYT1-216ENST00000574730 CADPSQ9ULU8 1353 aa34.68■■■■□ 3.14
PKMYT1-216ENST00000574730 PRDM2Q13029 1718 aa34.53■■■■□ 3.12
PKMYT1-216ENST00000574730 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
PKMYT1-216ENST00000574730 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
PKMYT1-216ENST00000574730 LAMC3Q9Y6N6 1575 aa34.47■■■■□ 3.11
PKMYT1-216ENST00000574730 NESP48681 1621 aa34.45■■■■□ 3.1
PKMYT1-216ENST00000574730 WRNQ14191 1432 aaPredicted RBP eCLIP34.37■■■■□ 3.091e-7■■□□□ 12.5
PKMYT1-216ENST00000574730 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
PKMYT1-216ENST00000574730 PDS5BQ9NTI5 1447 aa34.22■■■■□ 3.07
PKMYT1-216ENST00000574730 SYNJ1O43426 1573 aa34.22■■■■□ 3.07
PKMYT1-216ENST00000574730 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
PKMYT1-216ENST00000574730 CEP164Q9UPV0 1460 aa34.11■■■■□ 3.05
PKMYT1-216ENST00000574730 CUX1P39880 1505 aa34.11■■■■□ 3.05
PKMYT1-216ENST00000574730 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
PKMYT1-216ENST00000574730 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
PKMYT1-216ENST00000574730 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
PKMYT1-216ENST00000574730 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
PKMYT1-216ENST00000574730 URB2Q14146 1524 aaKnown RBP33.87■■■■□ 3.01
PKMYT1-216ENST00000574730 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
PKMYT1-216ENST00000574730 SOGA1O94964 1423 aa33.8■■■■□ 3
PKMYT1-216ENST00000574730 ERCC6Q03468 1493 aa33.8■■■■□ 3
PKMYT1-216ENST00000574730 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
PKMYT1-216ENST00000574730 MRC2Q9UBG0 1479 aa33.78■■■■□ 3
PKMYT1-216ENST00000574730 EEA1Q15075 1411 aa33.72■■■□□ 2.99
PKMYT1-216ENST00000574730 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
PKMYT1-216ENST00000574730 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
PKMYT1-216ENST00000574730 WDR62O43379 1518 aa33.62■■■□□ 2.97
PKMYT1-216ENST00000574730 THOC2Q8NI27 1593 aaKnown RBP33.57■■■□□ 2.96
PKMYT1-216ENST00000574730 CSRNP3Q8WYN3 585 aa33.56■■■□□ 2.96
PKMYT1-216ENST00000574730 RAD54L2Q9Y4B4 1467 aa33.55■■■□□ 2.96
PKMYT1-216ENST00000574730 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
PKMYT1-216ENST00000574730 LOC105371045A0A1W2PR82 267 aa33.53■■■□□ 2.96
PKMYT1-216ENST00000574730 CUX2O14529 1486 aa33.51■■■□□ 2.96
PKMYT1-216ENST00000574730 ABCA10Q8WWZ4 1543 aa33.5■■■□□ 2.95
PKMYT1-216ENST00000574730 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
PKMYT1-216ENST00000574730 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.94
PKMYT1-216ENST00000574730 IFT140Q96RY7 1462 aa33.32■■■□□ 2.93
PKMYT1-216ENST00000574730 EHMT2Q96KQ7 1210 aa33.3■■■□□ 2.92
PKMYT1-216ENST00000574730 IGF1RP08069 1367 aa33.28■■■□□ 2.92
PKMYT1-216ENST00000574730 KIF21BO75037 1637 aa33.27■■■□□ 2.92
PKMYT1-216ENST00000574730 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
PKMYT1-216ENST00000574730 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
PKMYT1-216ENST00000574730 PRXQ9BXM0 1461 aa33.23■■■□□ 2.91
PKMYT1-216ENST00000574730 GOLGA3Q08378 1498 aa33.21■■■□□ 2.91
PKMYT1-216ENST00000574730 GAPVD1Q14C86 1478 aa33.21■■■□□ 2.91
PKMYT1-216ENST00000574730 RAPGEF2Q9Y4G8 1499 aa33.14■■■□□ 2.9
PKMYT1-216ENST00000574730 ERICH3Q5RHP9 1530 aa33.13■■■□□ 2.89
PKMYT1-216ENST00000574730 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
PKMYT1-216ENST00000574730 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.892e-7■■■■■ 33.8
PKMYT1-216ENST00000574730 CARMIL1Q5VZK9 1371 aa33.1■■■□□ 2.89
PKMYT1-216ENST00000574730 UBTFP17480 764 aaKnown RBP33.09■■■□□ 2.89
PKMYT1-216ENST00000574730 TNIKQ9UKE5 1360 aa33.05■■■□□ 2.88
PKMYT1-216ENST00000574730 CUL7Q14999 1698 aa33.05■■■□□ 2.88
PKMYT1-216ENST00000574730 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
PKMYT1-216ENST00000574730 EIF4G3O43432 1585 aaKnown RBP33.01■■■□□ 2.87
PKMYT1-216ENST00000574730 GRIN2BQ13224 1484 aa33■■■□□ 2.87
PKMYT1-216ENST00000574730 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
PKMYT1-216ENST00000574730 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
PKMYT1-216ENST00000574730 CEP162Q5TB80 1403 aa32.83■■■□□ 2.85
PKMYT1-216ENST00000574730 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
PKMYT1-216ENST00000574730 MAGI1Q96QZ7 1491 aaPredicted RBP32.77■■■□□ 2.84
PKMYT1-216ENST00000574730 CLIP1P30622 1438 aa32.67■■■□□ 2.82
PKMYT1-216ENST00000574730 SYNJ2O15056 1496 aa32.64■■■□□ 2.82
PKMYT1-216ENST00000574730 CTTNBP2Q8WZ74 1663 aa32.61■■■□□ 2.81
PKMYT1-216ENST00000574730 RANGAP1P46060 587 aaPredicted RBP32.6■■■□□ 2.81
PKMYT1-216ENST00000574730 GRIN2AQ12879 1464 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms