RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NISCHQ9Y2I1 1504 aa50.69■■■■■ 5.71
MAP1LC3A-202ENST00000374837 CCDC180Q9P1Z9 1646 aa44.87■■■■■ 4.77
MAP1LC3A-202ENST00000374837 ABCC9O60706 1549 aa43.99■■■■■ 4.63
MAP1LC3A-202ENST00000374837 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
MAP1LC3A-202ENST00000374837 RB1CC1Q8TDY2 1594 aa42.27■■■■■ 4.36
MAP1LC3A-202ENST00000374837 NACADO15069 1562 aa42.26■■■■■ 4.36
MAP1LC3A-202ENST00000374837 ZCCHC6Q5VYS8 1495 aaKnown RBP42.23■■■■■ 4.35
MAP1LC3A-202ENST00000374837 MYO15BQ96JP2 1530 aa42.04■■■■■ 4.32
MAP1LC3A-202ENST00000374837 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
MAP1LC3A-202ENST00000374837 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
MAP1LC3A-202ENST00000374837 PABPN1Q86U42 306 aaKnown RBP eCLIP41.23■■■■■ 4.19
MAP1LC3A-202ENST00000374837 UNC13AQ9UPW8 1703 aa41.18■■■■■ 4.18
MAP1LC3A-202ENST00000374837 SCRIBQ14160 1630 aa41.04■■■■■ 4.16
MAP1LC3A-202ENST00000374837 BICRAQ9NZM4 1560 aa41.02■■■■■ 4.16
MAP1LC3A-202ENST00000374837 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
MAP1LC3A-202ENST00000374837 EIF4G1Q04637 1599 aaKnown RBP39.92■■■■□ 3.98
MAP1LC3A-202ENST00000374837 CC2D2AQ9P2K1 1620 aa39.73■■■■□ 3.95
MAP1LC3A-202ENST00000374837 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
MAP1LC3A-202ENST00000374837 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
MAP1LC3A-202ENST00000374837 BAZ1AQ9NRL2 1556 aaPredicted RBP39.24■■■■□ 3.87
MAP1LC3A-202ENST00000374837 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
MAP1LC3A-202ENST00000374837 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
MAP1LC3A-202ENST00000374837 NCAPD3P42695 1498 aa39.07■■■■□ 3.85
MAP1LC3A-202ENST00000374837 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
MAP1LC3A-202ENST00000374837 DNAJC5Q9H3Z4 198 aa38.92■■■■□ 3.82
MAP1LC3A-202ENST00000374837 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
MAP1LC3A-202ENST00000374837 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
MAP1LC3A-202ENST00000374837 BAZ1BQ9UIG0 1483 aaKnown RBP38.75■■■■□ 3.79
MAP1LC3A-202ENST00000374837 RSF1Q96T23 1441 aaPredicted RBP38.72■■■■□ 3.79
MAP1LC3A-202ENST00000374837 WIZO95785 1651 aa38.61■■■■□ 3.77
MAP1LC3A-202ENST00000374837 TOP2AP11388 1531 aaKnown RBP38.21■■■■□ 3.71
MAP1LC3A-202ENST00000374837 NESP48681 1621 aa38.1■■■■□ 3.69
MAP1LC3A-202ENST00000374837 CUX2O14529 1486 aa38.04■■■■□ 3.68
MAP1LC3A-202ENST00000374837 CADPSQ9ULU8 1353 aa37.97■■■■□ 3.67
MAP1LC3A-202ENST00000374837 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
MAP1LC3A-202ENST00000374837 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
MAP1LC3A-202ENST00000374837 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
MAP1LC3A-202ENST00000374837 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
MAP1LC3A-202ENST00000374837 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
MAP1LC3A-202ENST00000374837 CFTRP13569 1480 aa37.72■■■■□ 3.63
MAP1LC3A-202ENST00000374837 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
MAP1LC3A-202ENST00000374837 FANCD2Q9BXW9 1451 aa37.48■■■■□ 3.59
MAP1LC3A-202ENST00000374837 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
MAP1LC3A-202ENST00000374837 THOC2Q8NI27 1593 aaKnown RBP37.39■■■■□ 3.58
MAP1LC3A-202ENST00000374837 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
MAP1LC3A-202ENST00000374837 PRDM2Q13029 1718 aa37.19■■■■□ 3.54
MAP1LC3A-202ENST00000374837 WDR62O43379 1518 aa37.17■■■■□ 3.54
MAP1LC3A-202ENST00000374837 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
MAP1LC3A-202ENST00000374837 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
MAP1LC3A-202ENST00000374837 TOPBP1Q92547 1522 aa36.89■■■■□ 3.5
MAP1LC3A-202ENST00000374837 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
MAP1LC3A-202ENST00000374837 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
MAP1LC3A-202ENST00000374837 CUX1P39880 1505 aa36.64■■■■□ 3.46
MAP1LC3A-202ENST00000374837 IFT140Q96RY7 1462 aa36.63■■■■□ 3.45
MAP1LC3A-202ENST00000374837 POLA1P09884 1462 aaPredicted RBP36.58■■■■□ 3.45
MAP1LC3A-202ENST00000374837 FGD5Q6ZNL6 1462 aa36.51■■■■□ 3.44
MAP1LC3A-202ENST00000374837 SOGA1O94964 1423 aa36.5■■■■□ 3.43
MAP1LC3A-202ENST00000374837 ZNF608Q9ULD9 1512 aaPredicted RBP36.49■■■■□ 3.43
MAP1LC3A-202ENST00000374837 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.43
MAP1LC3A-202ENST00000374837 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
MAP1LC3A-202ENST00000374837 TARBP1Q13395 1621 aaKnown RBP36.42■■■■□ 3.42
MAP1LC3A-202ENST00000374837 AQRO60306 1485 aaKnown RBP eCLIP36.33■■■■□ 3.41
MAP1LC3A-202ENST00000374837 OSCARQ8IYS5 282 aa36.33■■■■□ 3.41
MAP1LC3A-202ENST00000374837 SYNJ1O43426 1573 aa36.32■■■■□ 3.41
MAP1LC3A-202ENST00000374837 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
MAP1LC3A-202ENST00000374837 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
MAP1LC3A-202ENST00000374837 BIVM-ERCC5R4GMW8 1640 aa36.26■■■■□ 3.39
MAP1LC3A-202ENST00000374837 EIF4G3O43432 1585 aaKnown RBP36.23■■■■□ 3.39
MAP1LC3A-202ENST00000374837 ABCA10Q8WWZ4 1543 aa36.16■■■■□ 3.38
MAP1LC3A-202ENST00000374837 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
MAP1LC3A-202ENST00000374837 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
MAP1LC3A-202ENST00000374837 GRIN2BQ13224 1484 aa36■■■■□ 3.35
MAP1LC3A-202ENST00000374837 SNAPC4Q5SXM2 1469 aa35.93■■■■□ 3.34
MAP1LC3A-202ENST00000374837 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
MAP1LC3A-202ENST00000374837 FBLN2P98095 1184 aa35.91■■■■□ 3.34
MAP1LC3A-202ENST00000374837 MAGI1Q96QZ7 1491 aaPredicted RBP35.86■■■■□ 3.33
MAP1LC3A-202ENST00000374837 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
MAP1LC3A-202ENST00000374837 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
MAP1LC3A-202ENST00000374837 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
MAP1LC3A-202ENST00000374837 CHMP7Q8WUX9 453 aaPredicted RBP35.82■■■■□ 3.32
MAP1LC3A-202ENST00000374837 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
MAP1LC3A-202ENST00000374837 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
MAP1LC3A-202ENST00000374837 CHD1O14646 1710 aa35.71■■■■□ 3.31
MAP1LC3A-202ENST00000374837 KIF27Q86VH2 1401 aa35.71■■■■□ 3.31
MAP1LC3A-202ENST00000374837 ERICH3Q5RHP9 1530 aa35.69■■■■□ 3.3
MAP1LC3A-202ENST00000374837 ARHGEF11O15085 1522 aa35.64■■■■□ 3.3
MAP1LC3A-202ENST00000374837 FHAD1B1AJZ9 1412 aa35.63■■■■□ 3.29
MAP1LC3A-202ENST00000374837 IGF1RP08069 1367 aa35.62■■■■□ 3.29
MAP1LC3A-202ENST00000374837 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
MAP1LC3A-202ENST00000374837 CYB5RLQ6IPT4 315 aa35.55■■■■□ 3.28
MAP1LC3A-202ENST00000374837 GRIN2AQ12879 1464 aa35.53■■■■□ 3.28
MAP1LC3A-202ENST00000374837 RUSC2Q8N2Y8 1516 aa35.46■■■■□ 3.27
MAP1LC3A-202ENST00000374837 CHIC1Q5VXU3 224 aa35.43■■■■□ 3.26
MAP1LC3A-202ENST00000374837 TRHP20396 242 aaPredicted RBP35.42■■■■□ 3.26
MAP1LC3A-202ENST00000374837 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
MAP1LC3A-202ENST00000374837 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
MAP1LC3A-202ENST00000374837 NUP160Q12769 1436 aa35.39■■■■□ 3.26
MAP1LC3A-202ENST00000374837 CEP170Q5SW79 1584 aa35.32■■■■□ 3.24
MAP1LC3A-202ENST00000374837 CUL7Q14999 1698 aa35.32■■■■□ 3.24
MAP1LC3A-202ENST00000374837 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms