RNA–Protein interactions for RNA: ENST00000561173.5

LHX9-206, Transcript of LIM homeobox 9, humanhuman

TSL 5 BASIC

Gene LHX9, Length 2,144 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-206ENST00000561173 NISCHQ9Y2I1 1504 aa46.09■■■■■ 4.97
LHX9-206ENST00000561173 CCDC180Q9P1Z9 1646 aa40.18■■■■■ 4.02
LHX9-206ENST00000561173 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
LHX9-206ENST00000561173 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
LHX9-206ENST00000561173 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
LHX9-206ENST00000561173 ABCC9O60706 1549 aa37.98■■■■□ 3.67
LHX9-206ENST00000561173 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
LHX9-206ENST00000561173 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
LHX9-206ENST00000561173 NACADO15069 1562 aa37.44■■■■□ 3.58
LHX9-206ENST00000561173 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
LHX9-206ENST00000561173 SCRIBQ14160 1630 aa36.95■■■■□ 3.51
LHX9-206ENST00000561173 UNC13AQ9UPW8 1703 aa36.29■■■■□ 3.4
LHX9-206ENST00000561173 SUPT5HO00267 1087 aaKnown RBP36.24■■■■□ 3.39
LHX9-206ENST00000561173 BICRAQ9NZM4 1560 aa35.94■■■■□ 3.34
LHX9-206ENST00000561173 PABPN1Q86U42 306 aaKnown RBP eCLIP35.83■■■■□ 3.33
LHX9-206ENST00000561173 CECR2Q9BXF3 1484 aa35.79■■■■□ 3.32
LHX9-206ENST00000561173 RSF1Q96T23 1441 aaPredicted RBP35.76■■■■□ 3.31
LHX9-206ENST00000561173 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
LHX9-206ENST00000561173 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
LHX9-206ENST00000561173 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
LHX9-206ENST00000561173 WIZO95785 1651 aa35.3■■■■□ 3.24
LHX9-206ENST00000561173 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
LHX9-206ENST00000561173 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
LHX9-206ENST00000561173 EIF4G1Q04637 1599 aaKnown RBP34.89■■■■□ 3.18
LHX9-206ENST00000561173 SMARCA2P51531 1590 aa34.85■■■■□ 3.17
LHX9-206ENST00000561173 ATAD2BQ9ULI0 1458 aa34.84■■■■□ 3.17
LHX9-206ENST00000561173 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
LHX9-206ENST00000561173 BAZ1BQ9UIG0 1483 aaKnown RBP34.67■■■■□ 3.14
LHX9-206ENST00000561173 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
LHX9-206ENST00000561173 NCAPD3P42695 1498 aa34.55■■■■□ 3.12
LHX9-206ENST00000561173 HMGXB3Q12766 1538 aa34.5■■■■□ 3.11
LHX9-206ENST00000561173 CC2D2AQ9P2K1 1620 aa34.36■■■■□ 3.09
LHX9-206ENST00000561173 TRIM41Q8WV44 630 aa34.1■■■■□ 3.05
LHX9-206ENST00000561173 ABCC8Q09428 1581 aa33.86■■■■□ 3.01
LHX9-206ENST00000561173 CFTRP13569 1480 aa33.78■■■■□ 3
LHX9-206ENST00000561173 WRNQ14191 1432 aaPredicted RBP eCLIP33.69■■■□□ 2.98
LHX9-206ENST00000561173 CADPSQ9ULU8 1353 aa33.68■■■□□ 2.98
LHX9-206ENST00000561173 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
LHX9-206ENST00000561173 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
LHX9-206ENST00000561173 FAM9AQ8IZU1 332 aaPredicted RBP33.45■■■□□ 2.95
LHX9-206ENST00000561173 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
LHX9-206ENST00000561173 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
LHX9-206ENST00000561173 LAMC3Q9Y6N6 1575 aa33.37■■■□□ 2.93
LHX9-206ENST00000561173 LOC105371045A0A1W2PR82 267 aa33.35■■■□□ 2.93
LHX9-206ENST00000561173 BIVM-ERCC5R4GMW8 1640 aa33.34■■■□□ 2.93
LHX9-206ENST00000561173 NESP48681 1621 aa33.34■■■□□ 2.93
LHX9-206ENST00000561173 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
LHX9-206ENST00000561173 CUX1P39880 1505 aa33.28■■■□□ 2.92
LHX9-206ENST00000561173 SOGA1O94964 1423 aa33.25■■■□□ 2.91
LHX9-206ENST00000561173 EEA1Q15075 1411 aa33.25■■■□□ 2.91
LHX9-206ENST00000561173 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
LHX9-206ENST00000561173 CEP164Q9UPV0 1460 aa33.1■■■□□ 2.89
LHX9-206ENST00000561173 RUSC2Q8N2Y8 1516 aa33.1■■■□□ 2.89
LHX9-206ENST00000561173 CSRNP3Q8WYN3 585 aa33.05■■■□□ 2.88
LHX9-206ENST00000561173 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
LHX9-206ENST00000561173 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
LHX9-206ENST00000561173 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
LHX9-206ENST00000561173 TOPBP1Q92547 1522 aa32.93■■■□□ 2.86
LHX9-206ENST00000561173 KIF21AQ7Z4S6 1674 aa32.92■■■□□ 2.86
LHX9-206ENST00000561173 URB2Q14146 1524 aaKnown RBP32.86■■■□□ 2.85
LHX9-206ENST00000561173 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
LHX9-206ENST00000561173 POLA1P09884 1462 aaPredicted RBP32.77■■■□□ 2.84
LHX9-206ENST00000561173 KIF21BO75037 1637 aa32.77■■■□□ 2.84
LHX9-206ENST00000561173 GOLGA3Q08378 1498 aa32.77■■■□□ 2.84
LHX9-206ENST00000561173 CUX2O14529 1486 aa32.74■■■□□ 2.83
LHX9-206ENST00000561173 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
LHX9-206ENST00000561173 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
LHX9-206ENST00000561173 RAD54L2Q9Y4B4 1467 aa32.66■■■□□ 2.82
LHX9-206ENST00000561173 UBTFP17480 764 aaKnown RBP32.66■■■□□ 2.82
LHX9-206ENST00000561173 ABCA10Q8WWZ4 1543 aa32.65■■■□□ 2.82
LHX9-206ENST00000561173 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
LHX9-206ENST00000561173 PRXQ9BXM0 1461 aa32.6■■■□□ 2.81
LHX9-206ENST00000561173 RAPGEF2Q9Y4G8 1499 aa32.58■■■□□ 2.81
LHX9-206ENST00000561173 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
LHX9-206ENST00000561173 IGF1RP08069 1367 aa32.53■■■□□ 2.8
LHX9-206ENST00000561173 WDR62O43379 1518 aa32.5■■■□□ 2.79
LHX9-206ENST00000561173 WDR97A6NE52 1622 aa32.5■■■□□ 2.79
LHX9-206ENST00000561173 CEP162Q5TB80 1403 aa32.49■■■□□ 2.79
LHX9-206ENST00000561173 TARBP1Q13395 1621 aaKnown RBP32.42■■■□□ 2.78
LHX9-206ENST00000561173 CARMIL1Q5VZK9 1371 aa32.38■■■□□ 2.77
LHX9-206ENST00000561173 THOC2Q8NI27 1593 aaKnown RBP32.38■■■□□ 2.77
LHX9-206ENST00000561173 TDRD9Q8NDG6 1382 aaKnown RBP32.36■■■□□ 2.77
LHX9-206ENST00000561173 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
LHX9-206ENST00000561173 GAPVD1Q14C86 1478 aa32.33■■■□□ 2.77
LHX9-206ENST00000561173 IFT140Q96RY7 1462 aa32.31■■■□□ 2.76
LHX9-206ENST00000561173 CUL7Q14999 1698 aa32.29■■■□□ 2.76
LHX9-206ENST00000561173 CLIP1P30622 1438 aa32.25■■■□□ 2.75
LHX9-206ENST00000561173 PCGF6Q9BYE7 350 aa32.17■■■□□ 2.74
LHX9-206ENST00000561173 AQRO60306 1485 aaKnown RBP eCLIP32.14■■■□□ 2.74
LHX9-206ENST00000561173 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
LHX9-206ENST00000561173 RANGAP1P46060 587 aaPredicted RBP32.09■■■□□ 2.73
LHX9-206ENST00000561173 ZNF608Q9ULD9 1512 aaPredicted RBP32.09■■■□□ 2.73
LHX9-206ENST00000561173 TRIM26Q12899 539 aaPredicted RBP32.09■■■□□ 2.73
LHX9-206ENST00000561173 GRIN2BQ13224 1484 aa32.08■■■□□ 2.73
LHX9-206ENST00000561173 EIF4G3O43432 1585 aaKnown RBP31.99■■■□□ 2.71
LHX9-206ENST00000561173 FHAD1B1AJZ9 1412 aa31.99■■■□□ 2.71
LHX9-206ENST00000561173 VPS8Q8N3P4 1428 aa31.96■■■□□ 2.71
LHX9-206ENST00000561173 ADAMTS12P58397 1594 aa31.95■■■□□ 2.7
LHX9-206ENST00000561173 CTTNBP2Q8WZ74 1663 aa31.91■■■□□ 2.7
LHX9-206ENST00000561173 ARAP1Q96P48 1450 aa31.89■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms