Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 ECM9YKR004C 1134 nt2.27□□□□□ -2.05
SHE3P38272 RPS1AYLR441C 768 nt2.27□□□□□ -2.05
SHE3P38272 AIM36YMR157C 768 nt2.27□□□□□ -2.05
SHE3P38272 RSA1YPL193W 1146 nt2.27□□□□□ -2.05
SHE3P38272 KRE33YNL132W 3171 nt2.27□□□□□ -2.05
SHE3P38272 YDR338CYDR338C 2088 nt2.27□□□□□ -2.05
SHE3P38272 TOR2YKL203C 7425 nt2.26□□□□□ -2.05
SHE3P38272 CTF13YMR094W 1437 nt2.26□□□□□ -2.05
SHE3P38272 YER079C-AYER079C-A 339 nt2.26□□□□□ -2.05
SHE3P38272 ATG38YLR211C 681 nt2.26□□□□□ -2.05
SHE3P38272 YLR271WYLR271W 825 nt2.26□□□□□ -2.05
SHE3P38272 RPL16BYNL069C 597 nt2.26□□□□□ -2.05
SHE3P38272 TFC3YAL001C 3483 nt2.26□□□□□ -2.05
SHE3P38272 ALK2YBL009W 2031 nt2.25□□□□□ -2.05
SHE3P38272 DUG2YBR281C 2637 nt2.25□□□□□ -2.05
SHE3P38272 ALY1YKR021W 2748 nt2.25□□□□□ -2.05
SHE3P38272 snR9snR9 187 nt2.25□□□□□ -2.05
SHE3P38272 TMA20YER007C-A 546 nt2.25□□□□□ -2.05
SHE3P38272 PRP38YGR075C 729 nt2.25□□□□□ -2.05
SHE3P38272 RSR1YGR152C 819 nt2.25□□□□□ -2.05
SHE3P38272 OTU2YHL013C 924 nt2.25□□□□□ -2.05
SHE3P38272 BUD19YJL188C 309 nt2.25□□□□□ -2.05
SHE3P38272 SFT1YKL006C-A 294 nt2.25□□□□□ -2.05
SHE3P38272 SRP21YKL122C 504 nt2.25□□□□□ -2.05
SHE3P38272 VPS63YLR261C 327 nt2.25□□□□□ -2.05
SHE3P38272 RPS29AYLR388W 171 nt2.25□□□□□ -2.05
SHE3P38272 FPR1YNL135C 345 nt2.25□□□□□ -2.05
SHE3P38272 YOL029CYOL029C 606 nt2.25□□□□□ -2.05
SHE3P38272 URB2YJR041C 3525 nt2.25□□□□□ -2.05
SHE3P38272 YEL1YBL060W 2064 nt2.25□□□□□ -2.05
SHE3P38272 MFB1YDR219C 1398 nt2.24□□□□□ -2.05
SHE3P38272 YFL002W-BYFL002W-B 1317 nt2.24□□□□□ -2.05
SHE3P38272 YGR161W-AYGR161W-A 1317 nt2.24□□□□□ -2.05
SHE3P38272 YBL100W-AYBL100W-A 1317 nt2.24□□□□□ -2.05
SHE3P38272 YCL020WYCL020W 1317 nt2.24□□□□□ -2.05
SHE3P38272 YDR029WYDR029W 315 nt2.24□□□□□ -2.05
SHE3P38272 CAJ1YER048C 1176 nt2.24□□□□□ -2.05
SHE3P38272 YJL052C-AYJL052C-A 120 nt2.24□□□□□ -2.05
SHE3P38272 COX8YLR395C 237 nt2.24□□□□□ -2.05
SHE3P38272 GIM3YNL153C 390 nt2.24□□□□□ -2.05
SHE3P38272 HSP10YOR020C 321 nt2.24□□□□□ -2.05
SHE3P38272 CSM4YPL200W 471 nt2.24□□□□□ -2.05
SHE3P38272 TFB1YDR311W 1929 nt2.24□□□□□ -2.05
SHE3P38272 ATG11YPR049C 3537 nt2.24□□□□□ -2.05
SHE3P38272 SSP1YHR184W 1716 nt2.23□□□□□ -2.05
SHE3P38272 YDR461C-AYDR461C-A 243 nt2.23□□□□□ -2.05
SHE3P38272 FAR7YFR008W 666 nt2.23□□□□□ -2.05
SHE3P38272 EMP24YGL200C 612 nt2.23□□□□□ -2.05
SHE3P38272 COG2YGR120C 789 nt2.23□□□□□ -2.05
SHE3P38272 YIR036W-AYIR036W-A 402 nt2.23□□□□□ -2.05
SHE3P38272 YLR224WYLR224W 1110 nt2.23□□□□□ -2.05
SHE3P38272 FIR1YER032W 2631 nt2.23□□□□□ -2.05
SHE3P38272 SCY1YGL083W 2415 nt2.23□□□□□ -2.05
SHE3P38272 UBP15YMR304W 3693 nt2.22□□□□□ -2.05
SHE3P38272 MLH1YMR167W 2310 nt2.22□□□□□ -2.05
SHE3P38272 snR59snR59 78 nt2.22□□□□□ -2.05
SHE3P38272 YGR109W-AYGR109W-A 873 nt2.22□□□□□ -2.05
SHE3P38272 YHR054CYHR054C 1065 nt2.22□□□□□ -2.05
SHE3P38272 CKA1YIL035C 1119 nt2.22□□□□□ -2.05
SHE3P38272 YIL082WYIL082W 873 nt2.22□□□□□ -2.05
SHE3P38272 ACF4YJR083C 930 nt2.22□□□□□ -2.05
SHE3P38272 RRT16YNL105W 429 nt2.22□□□□□ -2.05
SHE3P38272 YNL150WYNL150W 408 nt2.22□□□□□ -2.05
SHE3P38272 KAR9YPL269W 1935 nt2.22□□□□□ -2.05
SHE3P38272 GYP5YPL249C 2685 nt2.22□□□□□ -2.05
SHE3P38272 TIM11YDR322C-A 291 nt2.21□□□□□ -2.06
SHE3P38272 PEX4YGR133W 552 nt2.21□□□□□ -2.06
SHE3P38272 NEL1YHR035W 1893 nt2.21□□□□□ -2.06
SHE3P38272 GMC2YLR445W 567 nt2.21□□□□□ -2.06
SHE3P38272 YMR173W-AYMR173W-A 1185 nt2.21□□□□□ -2.06
SHE3P38272 YAP7YOL028C 738 nt2.21□□□□□ -2.06
SHE3P38272 YOL085W-AYOL085W-A 213 nt2.21□□□□□ -2.06
SHE3P38272 YOR169CYOR169C 465 nt2.21□□□□□ -2.06
SHE3P38272 BRE1YDL074C 2103 nt2.21□□□□□ -2.06
SHE3P38272 YPK1YKL126W 2043 nt2.2□□□□□ -2.06
SHE3P38272 MRP10YDL045W-A 288 nt2.2□□□□□ -2.06
SHE3P38272 OCA6YDR067C 675 nt2.2□□□□□ -2.06
SHE3P38272 RTS3YGR161C 792 nt2.2□□□□□ -2.06
SHE3P38272 ATP18YML081C-A 180 nt2.2□□□□□ -2.06
SHE3P38272 snR191snR191 274 nt2.2□□□□□ -2.06
SHE3P38272 YOL098CYOL098C 3114 nt2.2□□□□□ -2.06
SHE3P38272 GDI1YER136W 1356 nt2.2□□□□□ -2.06
SHE3P38272 TOF1YNL273W 3717 nt2.19□□□□□ -2.06
SHE3P38272 YDR210W-AYDR210W-A 1317 nt2.19□□□□□ -2.06
SHE3P38272 GAL80YML051W 1308 nt2.19□□□□□ -2.06
SHE3P38272 BFR1YOR198C 1413 nt2.19□□□□□ -2.06
SHE3P38272 TRZ1YKR079C 2517 nt2.19□□□□□ -2.06
SHE3P38272 SLX9YGR081C 633 nt2.19□□□□□ -2.06
SHE3P38272 VMA21YGR105W 234 nt2.19□□□□□ -2.06
SHE3P38272 YGR228WYGR228W 345 nt2.19□□□□□ -2.06
SHE3P38272 YGR242WYGR242W 309 nt2.19□□□□□ -2.06
SHE3P38272 YJL086CYJL086C 369 nt2.19□□□□□ -2.06
SHE3P38272 MRP49YKL167C 414 nt2.19□□□□□ -2.06
SHE3P38272 YNR021WYNR021W 1215 nt2.19□□□□□ -2.06
SHE3P38272 RPL25YOL127W 429 nt2.19□□□□□ -2.06
SHE3P38272 ARF3YOR094W 552 nt2.19□□□□□ -2.06
SHE3P38272 YPR172WYPR172W 603 nt2.19□□□□□ -2.06
SHE3P38272 KAP123YER110C 3342 nt2.19□□□□□ -2.06
SHE3P38272 SWA2YDR320C 2007 nt2.18□□□□□ -2.06
SHE3P38272 HRD3YLR207W 2502 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms