RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeastyeast

Gene CSM4, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM4YPL200W MTC1P47018 478 aaKnown RBP13.4□□□□□ -0.26
CSM4YPL200W DRS1P32892 752 aaKnown RBP12.57□□□□□ -0.4
CSM4YPL200W FAP1P53971 965 aa12.17□□□□□ -0.46
CSM4YPL200W PRY3P47033 881 aa11.42□□□□□ -0.58
CSM4YPL200W PRI1P10363 409 aa11.28□□□□□ -0.6
CSM4YPL200W AAD16Q02895 342 aa11.24□□□□□ -0.61
CSM4YPL200W ISW2Q08773 1120 aa11.15□□□□□ -0.62
CSM4YPL200W RPG1P38249 964 aaKnown RBP11.02□□□□□ -0.65
CSM4YPL200W DIP2Q12220 943 aaPredicted RBP10.99□□□□□ -0.65
CSM4YPL200W TSR3Q12094 313 aaKnown RBP10.71□□□□□ -0.69
CSM4YPL200W HAA1Q12753 694 aaKnown RBP10.65□□□□□ -0.7
CSM4YPL200W RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.71
CSM4YPL200W YCK3P39962 524 aa10.62□□□□□ -0.71
CSM4YPL200W AVT3P36062 692 aa10.53□□□□□ -0.72
CSM4YPL200W BFR2Q06631 534 aaKnown RBP10.47□□□□□ -0.73
CSM4YPL200W RPL17AP05740 184 aaKnown RBP10.32□□□□□ -0.76
CSM4YPL200W RPL17BP46990 184 aaKnown RBP10.32□□□□□ -0.76
CSM4YPL200W REB1P21538 810 aa10.31□□□□□ -0.76
CSM4YPL200W MRPL32P25348 183 aa10.31□□□□□ -0.76
CSM4YPL200W YGL015CP33199 130 aa9.85□□□□□ -0.83
CSM4YPL200W SPT21P35209 758 aa9.78□□□□□ -0.84
CSM4YPL200W CDC27P38042 758 aa9.73□□□□□ -0.85
CSM4YPL200W YKR023WP36119 530 aaKnown RBP9.69□□□□□ -0.86
CSM4YPL200W HOP09932 586 aa9.55□□□□□ -0.88
CSM4YPL200W DCD1P06773 312 aa9.51□□□□□ -0.89
CSM4YPL200W TFC8Q12308 588 aa9.51□□□□□ -0.89
CSM4YPL200W UBP10P53874 792 aaPredicted RBP9.47□□□□□ -0.89
CSM4YPL200W MAP2P38174 421 aaKnown RBP9.46□□□□□ -0.9
CSM4YPL200W RIM101P33400 625 aa9.44□□□□□ -0.9
CSM4YPL200W TFA1P36100 482 aa9.31□□□□□ -0.92
CSM4YPL200W SCY1P53009 804 aa9.29□□□□□ -0.92
CSM4YPL200W BCH2P36122 765 aa9.19□□□□□ -0.94
CSM4YPL200W SLX5P32828 619 aaKnown RBP9.17□□□□□ -0.94
CSM4YPL200W OXP1P28273 1286 aa9.13□□□□□ -0.95
CSM4YPL200W TIF4632P39936 914 aaKnown RBP9.13□□□□□ -0.95
CSM4YPL200W PTP3P40048 928 aa9.11□□□□□ -0.95
CSM4YPL200W YIL055CP40523 627 aaKnown RBP9.1□□□□□ -0.95
CSM4YPL200W TGL3P40308 642 aa9.02□□□□□ -0.97
CSM4YPL200W BUD31P25337 157 aaPredicted RBP9□□□□□ -0.97
CSM4YPL200W EPS1P40557 701 aa9□□□□□ -0.97
CSM4YPL200W YAH1Q12184 172 aaKnown RBP8.97□□□□□ -0.97
CSM4YPL200W BDF1P35817 686 aa8.94□□□□□ -0.98
CSM4YPL200W RSM7P47150 247 aa8.91□□□□□ -0.98
CSM4YPL200W BBC1P47068 1157 aa8.88□□□□□ -0.99
CSM4YPL200W AI2P03876 854 aa8.83□□□□□ -1
CSM4YPL200W UBP9P39967 754 aa8.81□□□□□ -1
CSM4YPL200W YLR271WQ06152 274 aa8.73□□□□□ -1.01
CSM4YPL200W YOR238WQ08634 303 aa8.66□□□□□ -1.02
CSM4YPL200W SIS1P25294 352 aaKnown RBP8.65□□□□□ -1.02
CSM4YPL200W SSP1P38871 571 aa8.65□□□□□ -1.02
CSM4YPL200W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
CSM4YPL200W YAP5P40574 245 aa8.6□□□□□ -1.03
CSM4YPL200W MST1P07236 462 aa8.59□□□□□ -1.03
CSM4YPL200W NSR1P27476 414 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
CSM4YPL200W PSD2P53037 1138 aaKnown RBP8.59□□□□□ -1.03
CSM4YPL200W YBL029C-AQ3E756 94 aa8.55□□□□□ -1.04
CSM4YPL200W MRM1P25270 412 aa8.53□□□□□ -1.04
CSM4YPL200W GTT3P39996 337 aa8.48□□□□□ -1.05
CSM4YPL200W WSC3Q12215 556 aa8.47□□□□□ -1.05
CSM4YPL200W CST9Q06032 482 aa8.44□□□□□ -1.06
CSM4YPL200W PIB1Q06651 286 aa8.44□□□□□ -1.06
CSM4YPL200W MGA2P40578 1113 aa8.43□□□□□ -1.06
CSM4YPL200W VNX1P42839 908 aa8.43□□□□□ -1.06
CSM4YPL200W SPP1Q03012 353 aa8.4□□□□□ -1.06
CSM4YPL200W RTG3P38165 486 aa8.33□□□□□ -1.08
CSM4YPL200W TIF11P38912 153 aaKnown RBP8.3□□□□□ -1.08
CSM4YPL200W YMR1P47147 688 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
CSM4YPL200W DBP1P24784 617 aaKnown RBP8.28□□□□□ -1.08
CSM4YPL200W YFR006WP43590 535 aa8.28□□□□□ -1.08
CSM4YPL200W VPS29P38759 282 aa8.27□□□□□ -1.09
CSM4YPL200W RCR1P38212 213 aa8.23□□□□□ -1.09
CSM4YPL200W ULI1P43604 169 aa8.22□□□□□ -1.09
CSM4YPL200W STS1P38637 319 aa8.21□□□□□ -1.1
CSM4YPL200W SET4P42948 560 aa8.19□□□□□ -1.1
CSM4YPL200W MSB4Q12317 492 aa8.19□□□□□ -1.1
CSM4YPL200W LDB19Q12502 818 aa8.19□□□□□ -1.1
CSM4YPL200W YOL036WQ08206 761 aa8.18□□□□□ -1.1
CSM4YPL200W VMA1P17255 1071 aaKnown RBP8.17□□□□□ -1.1
CSM4YPL200W EAP1P36041 632 aaKnown RBP8.16□□□□□ -1.1
CSM4YPL200W YJL171CP46992 396 aa8.16□□□□□ -1.1
CSM4YPL200W FKH1P40466 484 aa8.15□□□□□ -1.1
CSM4YPL200W AIR2Q12476 344 aaKnown RBP8.13□□□□□ -1.11
CSM4YPL200W IOC2Q12072 812 aa8.12□□□□□ -1.11
CSM4YPL200W TRP5P00931 707 aaKnown RBP8.08□□□□□ -1.12
CSM4YPL200W SAM3Q08986 587 aa8.07□□□□□ -1.12
CSM4YPL200W RTG1P32607 177 aa8.05□□□□□ -1.12
CSM4YPL200W GYP5Q12344 894 aa8.03□□□□□ -1.12
CSM4YPL200W BMT6Q12291 365 aa8.02□□□□□ -1.13
CSM4YPL200W YNL035CP53962 389 aaKnown RBP8□□□□□ -1.13
CSM4YPL200W ABP1P15891 592 aaKnown RBP7.99□□□□□ -1.13
CSM4YPL200W NCR1Q12200 1170 aa7.99□□□□□ -1.13
CSM4YPL200W RAM2P29703 316 aa7.98□□□□□ -1.13
CSM4YPL200W MIF2P35201 549 aa7.98□□□□□ -1.13
CSM4YPL200W DCW1P36091 449 aa7.98□□□□□ -1.13
CSM4YPL200W HTA1P04911 132 aaKnown RBP7.97□□□□□ -1.13
CSM4YPL200W HTA2P04912 132 aa7.97□□□□□ -1.13
CSM4YPL200W MAK11P20484 414 aaKnown RBP7.96□□□□□ -1.14
CSM4YPL200W SEC61P32915 480 aa7.96□□□□□ -1.14
CSM4YPL200W TFG1P41895 735 aaPredicted RBP7.96□□□□□ -1.14
CSM4YPL200W GRE2Q12068 342 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms