RNA–Protein interactions for RNA: YER007C-A

TMA20, Transcript of Protein of unknown function that associates with ribosomes, yeastyeast

Gene TMA20, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMA20YER007C-A MTC1P47018 478 aaKnown RBP12.61□□□□□ -0.39
TMA20YER007C-A DRS1P32892 752 aaKnown RBP12.31□□□□□ -0.44
TMA20YER007C-A FAP1P53971 965 aa10.89□□□□□ -0.67
TMA20YER007C-A DIP2Q12220 943 aaPredicted RBP10.61□□□□□ -0.71
TMA20YER007C-A BFR2Q06631 534 aaKnown RBP10.47□□□□□ -0.73
TMA20YER007C-A ISW2Q08773 1120 aa10.4□□□□□ -0.74
TMA20YER007C-A PRI1P10363 409 aa10.35□□□□□ -0.75
TMA20YER007C-A AVT3P36062 692 aa10.3□□□□□ -0.76
TMA20YER007C-A RPG1P38249 964 aaKnown RBP10.26□□□□□ -0.77
TMA20YER007C-A AAD16Q02895 342 aa10.26□□□□□ -0.77
TMA20YER007C-A PRY3P47033 881 aa10.2□□□□□ -0.78
TMA20YER007C-A RSE1Q04693 1361 aaKnown RBP10.13□□□□□ -0.79
TMA20YER007C-A TSR3Q12094 313 aaKnown RBP9.85□□□□□ -0.83
TMA20YER007C-A RPL17AP05740 184 aaKnown RBP9.78□□□□□ -0.84
TMA20YER007C-A RPL17BP46990 184 aaKnown RBP9.78□□□□□ -0.84
TMA20YER007C-A REB1P21538 810 aa9.72□□□□□ -0.85
TMA20YER007C-A HAA1Q12753 694 aaKnown RBP9.57□□□□□ -0.88
TMA20YER007C-A TFA1P36100 482 aa9.52□□□□□ -0.89
TMA20YER007C-A YCK3P39962 524 aa9.52□□□□□ -0.89
TMA20YER007C-A MRPL32P25348 183 aa9.49□□□□□ -0.89
TMA20YER007C-A SPT21P35209 758 aa9.31□□□□□ -0.92
TMA20YER007C-A RIM101P33400 625 aa9.12□□□□□ -0.95
TMA20YER007C-A YKR023WP36119 530 aaKnown RBP9.12□□□□□ -0.95
TMA20YER007C-A CDC27P38042 758 aa9.03□□□□□ -0.96
TMA20YER007C-A HOP09932 586 aa8.99□□□□□ -0.97
TMA20YER007C-A YGL015CP33199 130 aa8.95□□□□□ -0.98
TMA20YER007C-A TFC8Q12308 588 aa8.95□□□□□ -0.98
TMA20YER007C-A DCD1P06773 312 aa8.91□□□□□ -0.98
TMA20YER007C-A OXP1P28273 1286 aa8.82□□□□□ -1
TMA20YER007C-A YIL055CP40523 627 aaKnown RBP8.79□□□□□ -1
TMA20YER007C-A PTP3P40048 928 aa8.75□□□□□ -1.01
TMA20YER007C-A MAP2P38174 421 aaKnown RBP8.72□□□□□ -1.01
TMA20YER007C-A UBP10P53874 792 aaPredicted RBP8.72□□□□□ -1.01
TMA20YER007C-A YAH1Q12184 172 aaKnown RBP8.72□□□□□ -1.01
TMA20YER007C-A BCH2P36122 765 aa8.68□□□□□ -1.02
TMA20YER007C-A SCY1P53009 804 aa8.65□□□□□ -1.02
TMA20YER007C-A RSM7P47150 247 aa8.6□□□□□ -1.03
TMA20YER007C-A SSP1P38871 571 aa8.56□□□□□ -1.04
TMA20YER007C-A YLR271WQ06152 274 aa8.52□□□□□ -1.05
TMA20YER007C-A SLX5P32828 619 aaKnown RBP8.51□□□□□ -1.05
TMA20YER007C-A EPS1P40557 701 aa8.51□□□□□ -1.05
TMA20YER007C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
TMA20YER007C-A AI2P03876 854 aa8.49□□□□□ -1.05
TMA20YER007C-A BBC1P47068 1157 aa8.49□□□□□ -1.05
TMA20YER007C-A BDF1P35817 686 aa8.45□□□□□ -1.06
TMA20YER007C-A TIF4632P39936 914 aaKnown RBP8.42□□□□□ -1.06
TMA20YER007C-A TGL3P40308 642 aa8.33□□□□□ -1.08
TMA20YER007C-A PSD2P53037 1138 aaKnown RBP8.33□□□□□ -1.08
TMA20YER007C-A MGA2P40578 1113 aa8.3□□□□□ -1.08
TMA20YER007C-A CST9Q06032 482 aa8.25□□□□□ -1.09
TMA20YER007C-A MRM1P25270 412 aa8.22□□□□□ -1.09
TMA20YER007C-A BUD31P25337 157 aaPredicted RBP8.14□□□□□ -1.11
TMA20YER007C-A YAP5P40574 245 aa8.08□□□□□ -1.12
TMA20YER007C-A RTG3P38165 486 aa8.07□□□□□ -1.12
TMA20YER007C-A YOR238WQ08634 303 aa8.07□□□□□ -1.12
TMA20YER007C-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
TMA20YER007C-A RCR1P38212 213 aa8□□□□□ -1.13
TMA20YER007C-A MST1P07236 462 aa7.99□□□□□ -1.13
TMA20YER007C-A VPS29P38759 282 aa7.98□□□□□ -1.13
TMA20YER007C-A UBP9P39967 754 aa7.98□□□□□ -1.13
TMA20YER007C-A PIB1Q06651 286 aa7.98□□□□□ -1.13
TMA20YER007C-A YMR1P47147 688 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
TMA20YER007C-A DBP1P24784 617 aaKnown RBP7.93□□□□□ -1.14
TMA20YER007C-A GTT3P39996 337 aa7.93□□□□□ -1.14
TMA20YER007C-A YFR006WP43590 535 aa7.92□□□□□ -1.14
TMA20YER007C-A STS1P38637 319 aa7.89□□□□□ -1.15
TMA20YER007C-A RAM2P29703 316 aa7.88□□□□□ -1.15
TMA20YER007C-A WSC3Q12215 556 aa7.85□□□□□ -1.15
TMA20YER007C-A YBL029C-AQ3E756 94 aa7.84□□□□□ -1.15
TMA20YER007C-A MAK11P20484 414 aaKnown RBP7.81□□□□□ -1.16
TMA20YER007C-A VMA1P17255 1071 aaKnown RBP7.79□□□□□ -1.16
TMA20YER007C-A MIF2P35201 549 aa7.77□□□□□ -1.17
TMA20YER007C-A VNX1P42839 908 aa7.77□□□□□ -1.17
TMA20YER007C-A SPP1Q03012 353 aa7.75□□□□□ -1.17
TMA20YER007C-A DMA1P38823 416 aa7.73□□□□□ -1.17
TMA20YER007C-A COQ8P27697 501 aa7.72□□□□□ -1.17
TMA20YER007C-A RQC2Q12532 1038 aaKnown RBP7.72□□□□□ -1.17
TMA20YER007C-A SET4P42948 560 aa7.71□□□□□ -1.18
TMA20YER007C-A YOL036WQ08206 761 aa7.71□□□□□ -1.18
TMA20YER007C-A SAM3Q08986 587 aa7.7□□□□□ -1.18
TMA20YER007C-A TIF11P38912 153 aaKnown RBP7.69□□□□□ -1.18
TMA20YER007C-A MSB4Q12317 492 aa7.69□□□□□ -1.18
TMA20YER007C-A SIS1P25294 352 aaKnown RBP7.68□□□□□ -1.18
TMA20YER007C-A GYP5Q12344 894 aa7.67□□□□□ -1.18
TMA20YER007C-A EDS1P38073 919 aa7.66□□□□□ -1.18
TMA20YER007C-A SET1P38827 1080 aaKnown RBP7.66□□□□□ -1.18
TMA20YER007C-A EAP1P36041 632 aaKnown RBP7.65□□□□□ -1.18
TMA20YER007C-A ULI1P43604 169 aa7.65□□□□□ -1.18
TMA20YER007C-A PTC3P34221 468 aaKnown RBP7.64□□□□□ -1.19
TMA20YER007C-A GRE2Q12068 342 aaKnown RBP7.64□□□□□ -1.19
TMA20YER007C-A ATH1P48016 1211 aa7.62□□□□□ -1.19
TMA20YER007C-A DCW1P36091 449 aa7.61□□□□□ -1.19
TMA20YER007C-A ABP1P15891 592 aaKnown RBP7.6□□□□□ -1.19
TMA20YER007C-A NOP53Q12080 455 aaKnown RBP7.6□□□□□ -1.19
TMA20YER007C-A TRP5P00931 707 aaKnown RBP7.58□□□□□ -1.2
TMA20YER007C-A HTA1P04911 132 aaKnown RBP7.58□□□□□ -1.2
TMA20YER007C-A HTA2P04912 132 aa7.58□□□□□ -1.2
TMA20YER007C-A GUT1P32190 709 aa7.57□□□□□ -1.2
TMA20YER007C-A LDB19Q12502 818 aa7.57□□□□□ -1.2
TMA20YER007C-A IOC2Q12072 812 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms