RNA–Protein interactions for RNA: YJR041C

URB2, Protein required for normal metabolism of the rRNA primary transcript, yeastyeast

Gene URB2, Length 3,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URB2YJR041C DRS1P32892 752 aaKnown RBP7.95□□□□□ -1.14
URB2YJR041C MTC1P47018 478 aaKnown RBP7.32□□□□□ -1.24
URB2YJR041C BFR2Q06631 534 aaKnown RBP7.11□□□□□ -1.27
URB2YJR041C TFA1P36100 482 aa6.92□□□□□ -1.3
URB2YJR041C DIP2Q12220 943 aaPredicted RBP6.55□□□□□ -1.36
URB2YJR041C AVT3P36062 692 aa6.54□□□□□ -1.36
URB2YJR041C RQC2Q12532 1038 aaKnown RBP6.36□□□□□ -1.39
URB2YJR041C RSE1Q04693 1361 aaKnown RBP6.02□□□□□ -1.45
URB2YJR041C DMA1P38823 416 aa6.01□□□□□ -1.45
URB2YJR041C PTP3P40048 928 aa5.89□□□□□ -1.47
URB2YJR041C TAF7Q05021 590 aa5.85□□□□□ -1.47
URB2YJR041C RPL17AP05740 184 aaKnown RBP5.83□□□□□ -1.48
URB2YJR041C RPL17BP46990 184 aaKnown RBP5.83□□□□□ -1.48
URB2YJR041C ISW2Q08773 1120 aa5.82□□□□□ -1.48
URB2YJR041C RPG1P38249 964 aaKnown RBP5.8□□□□□ -1.48
URB2YJR041C REB1P21538 810 aa5.7□□□□□ -1.5
URB2YJR041C SSP1P38871 571 aa5.61□□□□□ -1.51
URB2YJR041C YAH1Q12184 172 aaKnown RBP5.59□□□□□ -1.51
URB2YJR041C RIM101P33400 625 aa5.57□□□□□ -1.52
URB2YJR041C SPT21P35209 758 aa5.57□□□□□ -1.52
URB2YJR041C PRI1P10363 409 aa5.56□□□□□ -1.52
URB2YJR041C FAP1P53971 965 aa5.56□□□□□ -1.52
URB2YJR041C LEO1P38439 464 aa5.54□□□□□ -1.52
URB2YJR041C OXP1P28273 1286 aa5.49□□□□□ -1.53
URB2YJR041C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
URB2YJR041C TSR3Q12094 313 aaKnown RBP5.44□□□□□ -1.54
URB2YJR041C AAD16Q02895 342 aa5.43□□□□□ -1.54
URB2YJR041C YLR271WQ06152 274 aa5.43□□□□□ -1.54
URB2YJR041C YIL055CP40523 627 aaKnown RBP5.42□□□□□ -1.54
URB2YJR041C LEU3P08638 886 aa5.36□□□□□ -1.55
URB2YJR041C SAS10Q12136 610 aaPredicted RBP5.34□□□□□ -1.55
URB2YJR041C CST9Q06032 482 aa5.33□□□□□ -1.56
URB2YJR041C MGA2P40578 1113 aa5.32□□□□□ -1.56
URB2YJR041C DMA2P53924 522 aa5.31□□□□□ -1.56
URB2YJR041C YKR023WP36119 530 aaKnown RBP5.3□□□□□ -1.56
URB2YJR041C RSM7P47150 247 aa5.3□□□□□ -1.56
URB2YJR041C HOP09932 586 aa5.29□□□□□ -1.56
URB2YJR041C DCD1P06773 312 aa5.27□□□□□ -1.57
URB2YJR041C SPB4P25808 606 aaPredicted RBP5.2□□□□□ -1.58
URB2YJR041C RPN1P38764 993 aaKnown RBP5.19□□□□□ -1.58
URB2YJR041C TFC8Q12308 588 aa5.18□□□□□ -1.58
URB2YJR041C AI2P03876 854 aa5.18□□□□□ -1.58
URB2YJR041C PSD2P53037 1138 aaKnown RBP5.18□□□□□ -1.58
URB2YJR041C PRY3P47033 881 aa5.17□□□□□ -1.58
URB2YJR041C VPS70P47161 811 aa5.17□□□□□ -1.58
URB2YJR041C ABP1P15891 592 aaKnown RBP5.16□□□□□ -1.58
URB2YJR041C RAM2P29703 316 aa5.15□□□□□ -1.58
URB2YJR041C MRPL32P25348 183 aa5.14□□□□□ -1.59
URB2YJR041C SET1P38827 1080 aaKnown RBP5.14□□□□□ -1.59
URB2YJR041C RCR1P38212 213 aa5.13□□□□□ -1.59
URB2YJR041C CDC27P38042 758 aa5.11□□□□□ -1.59
URB2YJR041C MRM1P25270 412 aa5.1□□□□□ -1.59
URB2YJR041C BBC1P47068 1157 aa5.09□□□□□ -1.6
URB2YJR041C BCH2P36122 765 aa5.08□□□□□ -1.6
URB2YJR041C CKB1P43639 278 aa5.05□□□□□ -1.6
URB2YJR041C RLF2Q12495 606 aa5.05□□□□□ -1.6
URB2YJR041C EPS1P40557 701 aa5.02□□□□□ -1.61
URB2YJR041C YPR148CQ06523 435 aa5.02□□□□□ -1.61
URB2YJR041C GLC3P32775 704 aa5.01□□□□□ -1.61
URB2YJR041C KIN1P13185 1064 aa5.01□□□□□ -1.61
URB2YJR041C PBS2P08018 668 aa5□□□□□ -1.61
URB2YJR041C BDF1P35817 686 aa4.97□□□□□ -1.61
URB2YJR041C DSF2P38213 736 aa4.97□□□□□ -1.61
URB2YJR041C IFH1P39520 1085 aa4.97□□□□□ -1.61
URB2YJR041C RTG3P38165 486 aa4.97□□□□□ -1.61
URB2YJR041C IES2P40154 320 aa4.96□□□□□ -1.62
URB2YJR041C MAK11P20484 414 aaKnown RBP4.95□□□□□ -1.62
URB2YJR041C COQ8P27697 501 aa4.94□□□□□ -1.62
URB2YJR041C SCY1P53009 804 aa4.94□□□□□ -1.62
URB2YJR041C YNR021WP53723 404 aaKnown RBP4.93□□□□□ -1.62
URB2YJR041C DIT2P21595 489 aa4.93□□□□□ -1.62
URB2YJR041C MIF2P35201 549 aa4.93□□□□□ -1.62
URB2YJR041C MAM3Q12296 706 aa4.93□□□□□ -1.62
URB2YJR041C GUA1P38625 525 aaKnown RBP4.91□□□□□ -1.62
URB2YJR041C VPS29P38759 282 aa4.89□□□□□ -1.63
URB2YJR041C YFR006WP43590 535 aa4.89□□□□□ -1.63
URB2YJR041C EDS1P38073 919 aa4.88□□□□□ -1.63
URB2YJR041C REF2P42073 533 aaPredicted RBP4.88□□□□□ -1.63
URB2YJR041C NUP42P49686 430 aaKnown RBP4.86□□□□□ -1.63
URB2YJR041C ATF2P53296 535 aa4.86□□□□□ -1.63
URB2YJR041C HGH1P48362 394 aaKnown RBP4.86□□□□□ -1.63
URB2YJR041C AIM7Q12156 149 aa4.85□□□□□ -1.63
URB2YJR041C STS1P38637 319 aa4.85□□□□□ -1.63
URB2YJR041C YCK3P39962 524 aa4.84□□□□□ -1.63
URB2YJR041C TFB3Q03290 321 aa4.83□□□□□ -1.64
URB2YJR041C MAP2P38174 421 aaKnown RBP4.83□□□□□ -1.64
URB2YJR041C DBP1P24784 617 aaKnown RBP4.82□□□□□ -1.64
URB2YJR041C PKC1P24583 1151 aa4.81□□□□□ -1.64
URB2YJR041C PIB1Q06651 286 aa4.81□□□□□ -1.64
URB2YJR041C VHR2P40041 505 aa4.8□□□□□ -1.64
URB2YJR041C YML020WQ03722 664 aa4.8□□□□□ -1.64
URB2YJR041C YMR1P47147 688 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
URB2YJR041C MAK21Q12176 1025 aaKnown RBP4.79□□□□□ -1.64
URB2YJR041C PTC3P34221 468 aaKnown RBP4.77□□□□□ -1.65
URB2YJR041C YJL007CP47080 104 aa4.77□□□□□ -1.65
URB2YJR041C COX6P00427 148 aa4.77□□□□□ -1.65
URB2YJR041C HAA1Q12753 694 aaKnown RBP4.76□□□□□ -1.65
URB2YJR041C BRL1P38770 471 aa4.76□□□□□ -1.65
URB2YJR041C SLX5P32828 619 aaKnown RBP4.75□□□□□ -1.65
URB2YJR041C YOR238WQ08634 303 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms