RNA–Protein interactions for RNA: YHR035W

NEL1, Transcript of Activator of Sar1p GTPase activity, yeastyeast

Gene NEL1, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEL1YHR035W MTC1P47018 478 aaKnown RBP11.45□□□□□ -0.58
NEL1YHR035W DRS1P32892 752 aaKnown RBP11.25□□□□□ -0.61
NEL1YHR035W FAP1P53971 965 aa9.74□□□□□ -0.85
NEL1YHR035W DIP2Q12220 943 aaPredicted RBP9.66□□□□□ -0.86
NEL1YHR035W BFR2Q06631 534 aaKnown RBP9.62□□□□□ -0.87
NEL1YHR035W AVT3P36062 692 aa9.45□□□□□ -0.9
NEL1YHR035W ISW2Q08773 1120 aa9.39□□□□□ -0.91
NEL1YHR035W PRI1P10363 409 aa9.34□□□□□ -0.91
NEL1YHR035W RPG1P38249 964 aaKnown RBP9.27□□□□□ -0.93
NEL1YHR035W AAD16Q02895 342 aa9.22□□□□□ -0.93
NEL1YHR035W RSE1Q04693 1361 aaKnown RBP9.19□□□□□ -0.94
NEL1YHR035W PRY3P47033 881 aa9.12□□□□□ -0.95
NEL1YHR035W TSR3Q12094 313 aaKnown RBP8.87□□□□□ -0.99
NEL1YHR035W RPL17AP05740 184 aaKnown RBP8.87□□□□□ -0.99
NEL1YHR035W RPL17BP46990 184 aaKnown RBP8.87□□□□□ -0.99
NEL1YHR035W TFA1P36100 482 aa8.83□□□□□ -1
NEL1YHR035W REB1P21538 810 aa8.8□□□□□ -1
NEL1YHR035W YCK3P39962 524 aa8.56□□□□□ -1.04
NEL1YHR035W HAA1Q12753 694 aaKnown RBP8.56□□□□□ -1.04
NEL1YHR035W MRPL32P25348 183 aa8.53□□□□□ -1.04
NEL1YHR035W SPT21P35209 758 aa8.5□□□□□ -1.05
NEL1YHR035W RIM101P33400 625 aa8.32□□□□□ -1.08
NEL1YHR035W YKR023WP36119 530 aaKnown RBP8.28□□□□□ -1.08
NEL1YHR035W CDC27P38042 758 aa8.18□□□□□ -1.1
NEL1YHR035W HOP09932 586 aa8.13□□□□□ -1.11
NEL1YHR035W TFC8Q12308 588 aa8.12□□□□□ -1.11
NEL1YHR035W DCD1P06773 312 aa8.09□□□□□ -1.11
NEL1YHR035W OXP1P28273 1286 aa8.05□□□□□ -1.12
NEL1YHR035W YGL015CP33199 130 aa8.02□□□□□ -1.12
NEL1YHR035W YIL055CP40523 627 aaKnown RBP7.98□□□□□ -1.13
NEL1YHR035W PTP3P40048 928 aa7.96□□□□□ -1.13
NEL1YHR035W YAH1Q12184 172 aaKnown RBP7.94□□□□□ -1.14
NEL1YHR035W UBP10P53874 792 aaPredicted RBP7.89□□□□□ -1.15
NEL1YHR035W BCH2P36122 765 aa7.87□□□□□ -1.15
NEL1YHR035W MAP2P38174 421 aaKnown RBP7.87□□□□□ -1.15
NEL1YHR035W SSP1P38871 571 aa7.85□□□□□ -1.15
NEL1YHR035W RSM7P47150 247 aa7.83□□□□□ -1.16
NEL1YHR035W SCY1P53009 804 aa7.83□□□□□ -1.16
NEL1YHR035W YLR271WQ06152 274 aa7.8□□□□□ -1.16
NEL1YHR035W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
NEL1YHR035W AI2P03876 854 aa7.73□□□□□ -1.17
NEL1YHR035W EPS1P40557 701 aa7.73□□□□□ -1.17
NEL1YHR035W BBC1P47068 1157 aa7.71□□□□□ -1.18
NEL1YHR035W SLX5P32828 619 aaKnown RBP7.69□□□□□ -1.18
NEL1YHR035W BDF1P35817 686 aa7.68□□□□□ -1.18
NEL1YHR035W PSD2P53037 1138 aaKnown RBP7.62□□□□□ -1.19
NEL1YHR035W MGA2P40578 1113 aa7.6□□□□□ -1.19
NEL1YHR035W TIF4632P39936 914 aaKnown RBP7.58□□□□□ -1.2
NEL1YHR035W CST9Q06032 482 aa7.55□□□□□ -1.2
NEL1YHR035W TGL3P40308 642 aa7.51□□□□□ -1.21
NEL1YHR035W MRM1P25270 412 aa7.48□□□□□ -1.21
NEL1YHR035W RTG3P38165 486 aa7.36□□□□□ -1.23
NEL1YHR035W NSR1P27476 414 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
NEL1YHR035W RCR1P38212 213 aa7.32□□□□□ -1.24
NEL1YHR035W YAP5P40574 245 aa7.32□□□□□ -1.24
NEL1YHR035W YOR238WQ08634 303 aa7.28□□□□□ -1.24
NEL1YHR035W VPS29P38759 282 aa7.28□□□□□ -1.24
NEL1YHR035W YMR1P47147 688 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
NEL1YHR035W RAM2P29703 316 aa7.24□□□□□ -1.25
NEL1YHR035W MST1P07236 462 aa7.23□□□□□ -1.25
NEL1YHR035W PIB1Q06651 286 aa7.23□□□□□ -1.25
NEL1YHR035W RQC2Q12532 1038 aaKnown RBP7.23□□□□□ -1.25
NEL1YHR035W DBP1P24784 617 aaKnown RBP7.21□□□□□ -1.26
NEL1YHR035W YFR006WP43590 535 aa7.21□□□□□ -1.26
NEL1YHR035W STS1P38637 319 aa7.19□□□□□ -1.26
NEL1YHR035W DMA1P38823 416 aa7.19□□□□□ -1.26
NEL1YHR035W MAK11P20484 414 aaKnown RBP7.15□□□□□ -1.26
NEL1YHR035W GTT3P39996 337 aa7.15□□□□□ -1.26
NEL1YHR035W UBP9P39967 754 aa7.13□□□□□ -1.27
NEL1YHR035W BUD31P25337 157 aaPredicted RBP7.1□□□□□ -1.27
NEL1YHR035W VMA1P17255 1071 aaKnown RBP7.09□□□□□ -1.27
NEL1YHR035W MIF2P35201 549 aa7.07□□□□□ -1.28
NEL1YHR035W WSC3Q12215 556 aa7.07□□□□□ -1.28
NEL1YHR035W YBL029C-AQ3E756 94 aa7.07□□□□□ -1.28
NEL1YHR035W COQ8P27697 501 aa7.06□□□□□ -1.28
NEL1YHR035W SET1P38827 1080 aaKnown RBP7.02□□□□□ -1.28
NEL1YHR035W EDS1P38073 919 aa7.02□□□□□ -1.29
NEL1YHR035W VNX1P42839 908 aa7□□□□□ -1.29
NEL1YHR035W SAM3Q08986 587 aa7□□□□□ -1.29
NEL1YHR035W YOL036WQ08206 761 aa7□□□□□ -1.29
NEL1YHR035W SET4P42948 560 aa6.99□□□□□ -1.29
NEL1YHR035W PTC3P34221 468 aaKnown RBP6.98□□□□□ -1.29
NEL1YHR035W SPP1Q03012 353 aa6.98□□□□□ -1.29
NEL1YHR035W MSB4Q12317 492 aa6.98□□□□□ -1.29
NEL1YHR035W GYP5Q12344 894 aa6.96□□□□□ -1.29
NEL1YHR035W NOP53Q12080 455 aaKnown RBP6.96□□□□□ -1.3
NEL1YHR035W GRE2Q12068 342 aaKnown RBP6.95□□□□□ -1.3
NEL1YHR035W TIF11P38912 153 aaKnown RBP6.94□□□□□ -1.3
NEL1YHR035W ATH1P48016 1211 aa6.93□□□□□ -1.3
NEL1YHR035W ABP1P15891 592 aaKnown RBP6.92□□□□□ -1.3
NEL1YHR035W EAP1P36041 632 aaKnown RBP6.92□□□□□ -1.3
NEL1YHR035W IFH1P39520 1085 aa6.91□□□□□ -1.3
NEL1YHR035W DCW1P36091 449 aa6.9□□□□□ -1.3
NEL1YHR035W ULI1P43604 169 aa6.9□□□□□ -1.3
NEL1YHR035W GUT1P32190 709 aa6.9□□□□□ -1.31
NEL1YHR035W HTA1P04911 132 aaKnown RBP6.88□□□□□ -1.31
NEL1YHR035W HTA2P04912 132 aa6.88□□□□□ -1.31
NEL1YHR035W TRP5P00931 707 aaKnown RBP6.87□□□□□ -1.31
NEL1YHR035W YPR148CQ06523 435 aa6.87□□□□□ -1.31
NEL1YHR035W SAS10Q12136 610 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms