RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A FAP1P53971 965 aa13.95□□□□□ -0.18
YGR109W-AYGR109W-A MTC1P47018 478 aaKnown RBP13.66□□□□□ -0.22
YGR109W-AYGR109W-A PRY3P47033 881 aa13.21□□□□□ -0.29
YGR109W-AYGR109W-A DRS1P32892 752 aaKnown RBP13.12□□□□□ -0.31
YGR109W-AYGR109W-A YCK3P39962 524 aa12.39□□□□□ -0.43
YGR109W-AYGR109W-A HAA1Q12753 694 aaKnown RBP12.18□□□□□ -0.46
YGR109W-AYGR109W-A AAD16Q02895 342 aa12.13□□□□□ -0.47
YGR109W-AYGR109W-A PRI1P10363 409 aa11.92□□□□□ -0.5
YGR109W-AYGR109W-A DIP2Q12220 943 aaPredicted RBP11.37□□□□□ -0.59
YGR109W-AYGR109W-A ISW2Q08773 1120 aa11.24□□□□□ -0.61
YGR109W-AYGR109W-A TSR3Q12094 313 aaKnown RBP11.22□□□□□ -0.61
YGR109W-AYGR109W-A RPG1P38249 964 aaKnown RBP11.12□□□□□ -0.63
YGR109W-AYGR109W-A AVT3P36062 692 aa11.07□□□□□ -0.64
YGR109W-AYGR109W-A BFR2Q06631 534 aaKnown RBP11.07□□□□□ -0.64
YGR109W-AYGR109W-A BUD31P25337 157 aaPredicted RBP10.92□□□□□ -0.66
YGR109W-AYGR109W-A RSE1Q04693 1361 aaKnown RBP10.9□□□□□ -0.67
YGR109W-AYGR109W-A YGL015CP33199 130 aa10.87□□□□□ -0.67
YGR109W-AYGR109W-A MRPL32P25348 183 aa10.73□□□□□ -0.69
YGR109W-AYGR109W-A RPL17AP05740 184 aaKnown RBP10.53□□□□□ -0.72
YGR109W-AYGR109W-A RPL17BP46990 184 aaKnown RBP10.53□□□□□ -0.72
YGR109W-AYGR109W-A REB1P21538 810 aa10.44□□□□□ -0.74
YGR109W-AYGR109W-A SIS1P25294 352 aaKnown RBP10.23□□□□□ -0.77
YGR109W-AYGR109W-A SPT21P35209 758 aa10.1□□□□□ -0.79
YGR109W-AYGR109W-A TFA1P36100 482 aa10□□□□□ -0.81
YGR109W-AYGR109W-A YKR023WP36119 530 aaKnown RBP9.92□□□□□ -0.82
YGR109W-AYGR109W-A CDC27P38042 758 aa9.85□□□□□ -0.83
YGR109W-AYGR109W-A RIM101P33400 625 aa9.83□□□□□ -0.84
YGR109W-AYGR109W-A MAP2P38174 421 aaKnown RBP9.79□□□□□ -0.84
YGR109W-AYGR109W-A UBP9P39967 754 aa9.75□□□□□ -0.85
YGR109W-AYGR109W-A UBP10P53874 792 aaPredicted RBP9.75□□□□□ -0.85
YGR109W-AYGR109W-A HOP09932 586 aa9.72□□□□□ -0.85
YGR109W-AYGR109W-A TFC8Q12308 588 aa9.71□□□□□ -0.86
YGR109W-AYGR109W-A DCD1P06773 312 aa9.66□□□□□ -0.86
YGR109W-AYGR109W-A OXP1P28273 1286 aa9.52□□□□□ -0.89
YGR109W-AYGR109W-A BCH2P36122 765 aa9.4□□□□□ -0.9
YGR109W-AYGR109W-A TIF4632P39936 914 aaKnown RBP9.38□□□□□ -0.91
YGR109W-AYGR109W-A TGL3P40308 642 aa9.37□□□□□ -0.91
YGR109W-AYGR109W-A YIL055CP40523 627 aaKnown RBP9.37□□□□□ -0.91
YGR109W-AYGR109W-A SCY1P53009 804 aa9.37□□□□□ -0.91
YGR109W-AYGR109W-A PTP3P40048 928 aa9.34□□□□□ -0.91
YGR109W-AYGR109W-A YAH1Q12184 172 aaKnown RBP9.29□□□□□ -0.92
YGR109W-AYGR109W-A RSM7P47150 247 aa9.23□□□□□ -0.93
YGR109W-AYGR109W-A SLX5P32828 619 aaKnown RBP9.22□□□□□ -0.93
YGR109W-AYGR109W-A EPS1P40557 701 aa9.2□□□□□ -0.94
YGR109W-AYGR109W-A BDF1P35817 686 aa9.15□□□□□ -0.94
YGR109W-AYGR109W-A YLR271WQ06152 274 aa9.15□□□□□ -0.94
YGR109W-AYGR109W-A AI2P03876 854 aa9.12□□□□□ -0.95
YGR109W-AYGR109W-A SSP1P38871 571 aa9.11□□□□□ -0.95
YGR109W-AYGR109W-A BBC1P47068 1157 aa9.09□□□□□ -0.95
YGR109W-AYGR109W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
YGR109W-AYGR109W-A YBL029C-AQ3E756 94 aa9□□□□□ -0.97
YGR109W-AYGR109W-A PSD2P53037 1138 aaKnown RBP8.97□□□□□ -0.97
YGR109W-AYGR109W-A MGA2P40578 1113 aa8.86□□□□□ -0.99
YGR109W-AYGR109W-A CST9Q06032 482 aa8.84□□□□□ -0.99
YGR109W-AYGR109W-A MRM1P25270 412 aa8.81□□□□□ -1
YGR109W-AYGR109W-A YJL171CP46992 396 aa8.79□□□□□ -1
YGR109W-AYGR109W-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
YGR109W-AYGR109W-A VNX1P42839 908 aa8.77□□□□□ -1.01
YGR109W-AYGR109W-A AIR2Q12476 344 aaKnown RBP8.75□□□□□ -1.01
YGR109W-AYGR109W-A MST1P07236 462 aa8.74□□□□□ -1.01
YGR109W-AYGR109W-A YOR238WQ08634 303 aa8.74□□□□□ -1.01
YGR109W-AYGR109W-A YAP5P40574 245 aa8.72□□□□□ -1.01
YGR109W-AYGR109W-A SPP1Q03012 353 aa8.69□□□□□ -1.02
YGR109W-AYGR109W-A RTG3P38165 486 aa8.64□□□□□ -1.03
YGR109W-AYGR109W-A VPS29P38759 282 aa8.61□□□□□ -1.03
YGR109W-AYGR109W-A RCR1P38212 213 aa8.6□□□□□ -1.03
YGR109W-AYGR109W-A FKH1P40466 484 aa8.6□□□□□ -1.03
YGR109W-AYGR109W-A PIB1Q06651 286 aa8.59□□□□□ -1.03
YGR109W-AYGR109W-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
YGR109W-AYGR109W-A WSC3Q12215 556 aa8.55□□□□□ -1.04
YGR109W-AYGR109W-A DBP1P24784 617 aaKnown RBP8.53□□□□□ -1.04
YGR109W-AYGR109W-A GTT3P39996 337 aa8.52□□□□□ -1.05
YGR109W-AYGR109W-A YFR006WP43590 535 aa8.51□□□□□ -1.05
YGR109W-AYGR109W-A STS1P38637 319 aa8.5□□□□□ -1.05
YGR109W-AYGR109W-A BMT6Q12291 365 aa8.46□□□□□ -1.06
YGR109W-AYGR109W-A RAM2P29703 316 aa8.43□□□□□ -1.06
YGR109W-AYGR109W-A TIF11P38912 153 aaKnown RBP8.42□□□□□ -1.06
YGR109W-AYGR109W-A VMA1P17255 1071 aaKnown RBP8.4□□□□□ -1.06
YGR109W-AYGR109W-A MAK11P20484 414 aaKnown RBP8.36□□□□□ -1.07
YGR109W-AYGR109W-A YOL036WQ08206 761 aa8.34□□□□□ -1.07
YGR109W-AYGR109W-A LDB19Q12502 818 aa8.34□□□□□ -1.07
YGR109W-AYGR109W-A SAM3Q08986 587 aa8.33□□□□□ -1.08
YGR109W-AYGR109W-A SET4P42948 560 aa8.32□□□□□ -1.08
YGR109W-AYGR109W-A RGA2Q06407 1009 aa8.32□□□□□ -1.08
YGR109W-AYGR109W-A MSB4Q12317 492 aa8.32□□□□□ -1.08
YGR109W-AYGR109W-A ULI1P43604 169 aa8.29□□□□□ -1.08
YGR109W-AYGR109W-A MIF2P35201 549 aa8.27□□□□□ -1.09
YGR109W-AYGR109W-A EAP1P36041 632 aaKnown RBP8.26□□□□□ -1.09
YGR109W-AYGR109W-A IOC2Q12072 812 aa8.26□□□□□ -1.09
YGR109W-AYGR109W-A EDS1P38073 919 aa8.25□□□□□ -1.09
YGR109W-AYGR109W-A COQ8P27697 501 aa8.24□□□□□ -1.09
YGR109W-AYGR109W-A GYP5Q12344 894 aa8.24□□□□□ -1.09
YGR109W-AYGR109W-A TRP5P00931 707 aaKnown RBP8.22□□□□□ -1.09
YGR109W-AYGR109W-A PTC3P34221 468 aaKnown RBP8.2□□□□□ -1.1
YGR109W-AYGR109W-A ABP1P15891 592 aaKnown RBP8.18□□□□□ -1.1
YGR109W-AYGR109W-A GRE2Q12068 342 aaKnown RBP8.18□□□□□ -1.1
YGR109W-AYGR109W-A DCW1P36091 449 aa8.17□□□□□ -1.1
YGR109W-AYGR109W-A HTA1P04911 132 aaKnown RBP8.14□□□□□ -1.11
YGR109W-AYGR109W-A HTA2P04912 132 aa8.14□□□□□ -1.11
YGR109W-AYGR109W-A RTG1P32607 177 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms