RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeastyeast

Gene SRP21, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP21YKL122C MTC1P47018 478 aaKnown RBP16.55■□□□□ 0.24
SRP21YKL122C FAP1P53971 965 aa15.75■□□□□ 0.11
SRP21YKL122C PRY3P47033 881 aa14.83□□□□□ -0.04
SRP21YKL122C DRS1P32892 752 aaKnown RBP14.63□□□□□ -0.07
SRP21YKL122C AAD16Q02895 342 aa14.41□□□□□ -0.1
SRP21YKL122C PRI1P10363 409 aa14.39□□□□□ -0.11
SRP21YKL122C YCK3P39962 524 aa13.95□□□□□ -0.18
SRP21YKL122C HAA1Q12753 694 aaKnown RBP13.93□□□□□ -0.18
SRP21YKL122C ISW2Q08773 1120 aa13.92□□□□□ -0.18
SRP21YKL122C RPG1P38249 964 aaKnown RBP13.75□□□□□ -0.21
SRP21YKL122C TSR3Q12094 313 aaKnown RBP13.51□□□□□ -0.25
SRP21YKL122C DIP2Q12220 943 aaPredicted RBP13.13□□□□□ -0.31
SRP21YKL122C MRPL32P25348 183 aa13.05□□□□□ -0.32
SRP21YKL122C RSE1Q04693 1361 aaKnown RBP12.94□□□□□ -0.34
SRP21YKL122C YGL015CP33199 130 aa12.75□□□□□ -0.37
SRP21YKL122C REB1P21538 810 aa12.58□□□□□ -0.4
SRP21YKL122C RPL17AP05740 184 aaKnown RBP12.55□□□□□ -0.4
SRP21YKL122C RPL17BP46990 184 aaKnown RBP12.55□□□□□ -0.4
SRP21YKL122C AVT3P36062 692 aa12.43□□□□□ -0.42
SRP21YKL122C CDC27P38042 758 aa12.21□□□□□ -0.45
SRP21YKL122C UBP10P53874 792 aaPredicted RBP12.05□□□□□ -0.48
SRP21YKL122C BUD31P25337 157 aaPredicted RBP12.03□□□□□ -0.48
SRP21YKL122C YKR023WP36119 530 aaKnown RBP11.99□□□□□ -0.49
SRP21YKL122C SPT21P35209 758 aa11.96□□□□□ -0.49
SRP21YKL122C MAP2P38174 421 aaKnown RBP11.93□□□□□ -0.5
SRP21YKL122C BFR2Q06631 534 aaKnown RBP11.8□□□□□ -0.52
SRP21YKL122C TFC8Q12308 588 aa11.76□□□□□ -0.53
SRP21YKL122C HOP09932 586 aa11.72□□□□□ -0.53
SRP21YKL122C DCD1P06773 312 aa11.67□□□□□ -0.54
SRP21YKL122C TIF4632P39936 914 aaKnown RBP11.56□□□□□ -0.56
SRP21YKL122C SCY1P53009 804 aa11.55□□□□□ -0.56
SRP21YKL122C TGL3P40308 642 aa11.52□□□□□ -0.57
SRP21YKL122C SLX5P32828 619 aaKnown RBP11.49□□□□□ -0.57
SRP21YKL122C UBP9P39967 754 aa11.42□□□□□ -0.58
SRP21YKL122C RIM101P33400 625 aa11.38□□□□□ -0.59
SRP21YKL122C SIS1P25294 352 aaKnown RBP11.36□□□□□ -0.59
SRP21YKL122C BCH2P36122 765 aa11.33□□□□□ -0.6
SRP21YKL122C EPS1P40557 701 aa11.01□□□□□ -0.65
SRP21YKL122C BDF1P35817 686 aa10.98□□□□□ -0.65
SRP21YKL122C MST1P07236 462 aa10.94□□□□□ -0.66
SRP21YKL122C OXP1P28273 1286 aa10.93□□□□□ -0.66
SRP21YKL122C YOR238WQ08634 303 aa10.86□□□□□ -0.67
SRP21YKL122C YBL029C-AQ3E756 94 aa10.84□□□□□ -0.67
SRP21YKL122C PTP3P40048 928 aa10.83□□□□□ -0.68
SRP21YKL122C NSR1P27476 414 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
SRP21YKL122C YIL055CP40523 627 aaKnown RBP10.81□□□□□ -0.68
SRP21YKL122C VNX1P42839 908 aa10.72□□□□□ -0.69
SRP21YKL122C BBC1P47068 1157 aa10.71□□□□□ -0.69
SRP21YKL122C YAP5P40574 245 aa10.68□□□□□ -0.7
SRP21YKL122C RSM7P47150 247 aa10.65□□□□□ -0.7
SRP21YKL122C SPP1Q03012 353 aa10.62□□□□□ -0.71
SRP21YKL122C AI2P03876 854 aa10.61□□□□□ -0.71
SRP21YKL122C WSC3Q12215 556 aa10.55□□□□□ -0.72
SRP21YKL122C YAH1Q12184 172 aaKnown RBP10.49□□□□□ -0.73
SRP21YKL122C TIF11P38912 153 aaKnown RBP10.48□□□□□ -0.73
SRP21YKL122C AIR2Q12476 344 aaKnown RBP10.47□□□□□ -0.73
SRP21YKL122C GTT3P39996 337 aa10.46□□□□□ -0.73
SRP21YKL122C FKH1P40466 484 aa10.46□□□□□ -0.73
SRP21YKL122C YJL171CP46992 396 aa10.44□□□□□ -0.74
SRP21YKL122C YLR271WQ06152 274 aa10.31□□□□□ -0.76
SRP21YKL122C LDB19Q12502 818 aa10.31□□□□□ -0.76
SRP21YKL122C ULI1P43604 169 aa10.29□□□□□ -0.76
SRP21YKL122C IOC2Q12072 812 aa10.28□□□□□ -0.76
SRP21YKL122C PSD2P53037 1138 aaKnown RBP10.27□□□□□ -0.77
SRP21YKL122C TFA1P36100 482 aa10.24□□□□□ -0.77
SRP21YKL122C BMT6Q12291 365 aa10.24□□□□□ -0.77
SRP21YKL122C PIB1Q06651 286 aa10.23□□□□□ -0.77
SRP21YKL122C MSB4Q12317 492 aa10.22□□□□□ -0.77
SRP21YKL122C EAP1P36041 632 aaKnown RBP10.18□□□□□ -0.78
SRP21YKL122C MRM1P25270 412 aa10.17□□□□□ -0.78
SRP21YKL122C YOL036WQ08206 761 aa10.08□□□□□ -0.8
SRP21YKL122C RTG1P32607 177 aa10.06□□□□□ -0.8
SRP21YKL122C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
SRP21YKL122C SET4P42948 560 aa10.04□□□□□ -0.8
SRP21YKL122C YMR1P47147 688 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
SRP21YKL122C TRP5P00931 707 aaKnown RBP10.03□□□□□ -0.8
SRP21YKL122C NCR1Q12200 1170 aa10.02□□□□□ -0.81
SRP21YKL122C SEC61P32915 480 aa9.99□□□□□ -0.81
SRP21YKL122C SSP1P38871 571 aa9.99□□□□□ -0.81
SRP21YKL122C YNL035CP53962 389 aaKnown RBP9.99□□□□□ -0.81
SRP21YKL122C DBP1P24784 617 aaKnown RBP9.98□□□□□ -0.81
SRP21YKL122C VPS29P38759 282 aa9.97□□□□□ -0.81
SRP21YKL122C VMA1P17255 1071 aaKnown RBP9.94□□□□□ -0.82
SRP21YKL122C RTG3P38165 486 aa9.94□□□□□ -0.82
SRP21YKL122C SAM3Q08986 587 aa9.94□□□□□ -0.82
SRP21YKL122C YFR006WP43590 535 aa9.91□□□□□ -0.82
SRP21YKL122C STS1P38637 319 aa9.89□□□□□ -0.83
SRP21YKL122C CST9Q06032 482 aa9.89□□□□□ -0.83
SRP21YKL122C MGA2P40578 1113 aa9.87□□□□□ -0.83
SRP21YKL122C TFG1P41895 735 aaPredicted RBP9.87□□□□□ -0.83
SRP21YKL122C ABP1P15891 592 aaKnown RBP9.83□□□□□ -0.84
SRP21YKL122C JIP4Q03361 876 aa9.81□□□□□ -0.84
SRP21YKL122C DAN4P47179 1161 aa9.8□□□□□ -0.84
SRP21YKL122C SAP30P38429 201 aa9.76□□□□□ -0.85
SRP21YKL122C BCK2P33306 851 aa9.74□□□□□ -0.85
SRP21YKL122C YDL129WQ07555 291 aa9.74□□□□□ -0.85
SRP21YKL122C GYP5Q12344 894 aa9.74□□□□□ -0.85
SRP21YKL122C CHL1P22516 861 aaPredicted RBP9.72□□□□□ -0.85
SRP21YKL122C HTA1P04911 132 aaKnown RBP9.71□□□□□ -0.86
SRP21YKL122C HTA2P04912 132 aa9.71□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms