RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeastyeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWA2YDR320C MTC1P47018 478 aaKnown RBP8.81□□□□□ -1
SWA2YDR320C FAP1P53971 965 aa8.41□□□□□ -1.06
SWA2YDR320C PRY3P47033 881 aa7.95□□□□□ -1.14
SWA2YDR320C PRI1P10363 409 aa7.7□□□□□ -1.18
SWA2YDR320C DRS1P32892 752 aaKnown RBP7.69□□□□□ -1.18
SWA2YDR320C AAD16Q02895 342 aa7.68□□□□□ -1.18
SWA2YDR320C YCK3P39962 524 aa7.51□□□□□ -1.21
SWA2YDR320C HAA1Q12753 694 aaKnown RBP7.44□□□□□ -1.22
SWA2YDR320C ISW2Q08773 1120 aa7.39□□□□□ -1.23
SWA2YDR320C RPG1P38249 964 aaKnown RBP7.29□□□□□ -1.24
SWA2YDR320C TSR3Q12094 313 aaKnown RBP7.17□□□□□ -1.26
SWA2YDR320C DIP2Q12220 943 aaPredicted RBP6.94□□□□□ -1.3
SWA2YDR320C MRPL32P25348 183 aa6.92□□□□□ -1.3
SWA2YDR320C RSE1Q04693 1361 aaKnown RBP6.85□□□□□ -1.31
SWA2YDR320C YGL015CP33199 130 aa6.81□□□□□ -1.32
SWA2YDR320C BUD31P25337 157 aaPredicted RBP6.65□□□□□ -1.35
SWA2YDR320C REB1P21538 810 aa6.64□□□□□ -1.35
SWA2YDR320C RPL17AP05740 184 aaKnown RBP6.62□□□□□ -1.35
SWA2YDR320C RPL17BP46990 184 aaKnown RBP6.62□□□□□ -1.35
SWA2YDR320C AVT3P36062 692 aa6.61□□□□□ -1.35
SWA2YDR320C CDC27P38042 758 aa6.51□□□□□ -1.37
SWA2YDR320C UBP10P53874 792 aaPredicted RBP6.46□□□□□ -1.38
SWA2YDR320C SPT21P35209 758 aa6.4□□□□□ -1.38
SWA2YDR320C YKR023WP36119 530 aaKnown RBP6.4□□□□□ -1.38
SWA2YDR320C MAP2P38174 421 aaKnown RBP6.35□□□□□ -1.39
SWA2YDR320C TFC8Q12308 588 aa6.27□□□□□ -1.41
SWA2YDR320C SIS1P25294 352 aaKnown RBP6.26□□□□□ -1.41
SWA2YDR320C HOP09932 586 aa6.2□□□□□ -1.42
SWA2YDR320C DCD1P06773 312 aa6.17□□□□□ -1.42
SWA2YDR320C BFR2Q06631 534 aaKnown RBP6.17□□□□□ -1.42
SWA2YDR320C TGL3P40308 642 aa6.16□□□□□ -1.42
SWA2YDR320C TIF4632P39936 914 aaKnown RBP6.15□□□□□ -1.42
SWA2YDR320C SCY1P53009 804 aa6.13□□□□□ -1.43
SWA2YDR320C SLX5P32828 619 aaKnown RBP6.11□□□□□ -1.43
SWA2YDR320C UBP9P39967 754 aa6.09□□□□□ -1.43
SWA2YDR320C RIM101P33400 625 aa6.06□□□□□ -1.44
SWA2YDR320C BCH2P36122 765 aa6.03□□□□□ -1.44
SWA2YDR320C MST1P07236 462 aa5.89□□□□□ -1.47
SWA2YDR320C EPS1P40557 701 aa5.85□□□□□ -1.47
SWA2YDR320C BDF1P35817 686 aa5.84□□□□□ -1.48
SWA2YDR320C NSR1P27476 414 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SWA2YDR320C OXP1P28273 1286 aa5.81□□□□□ -1.48
SWA2YDR320C YOR238WQ08634 303 aa5.77□□□□□ -1.49
SWA2YDR320C YBL029C-AQ3E756 94 aa5.77□□□□□ -1.49
SWA2YDR320C VNX1P42839 908 aa5.72□□□□□ -1.49
SWA2YDR320C PTP3P40048 928 aa5.69□□□□□ -1.5
SWA2YDR320C YAP5P40574 245 aa5.69□□□□□ -1.5
SWA2YDR320C YIL055CP40523 627 aaKnown RBP5.67□□□□□ -1.5
SWA2YDR320C BBC1P47068 1157 aa5.66□□□□□ -1.5
SWA2YDR320C SPP1Q03012 353 aa5.64□□□□□ -1.51
SWA2YDR320C RSM7P47150 247 aa5.64□□□□□ -1.51
SWA2YDR320C AI2P03876 854 aa5.62□□□□□ -1.51
SWA2YDR320C FKH1P40466 484 aa5.62□□□□□ -1.51
SWA2YDR320C AIR2Q12476 344 aaKnown RBP5.62□□□□□ -1.51
SWA2YDR320C TIF11P38912 153 aaKnown RBP5.59□□□□□ -1.51
SWA2YDR320C WSC3Q12215 556 aa5.57□□□□□ -1.52
SWA2YDR320C GTT3P39996 337 aa5.53□□□□□ -1.52
SWA2YDR320C YJL171CP46992 396 aa5.53□□□□□ -1.52
SWA2YDR320C IOC2Q12072 812 aa5.51□□□□□ -1.53
SWA2YDR320C LDB19Q12502 818 aa5.49□□□□□ -1.53
SWA2YDR320C YAH1Q12184 172 aaKnown RBP5.48□□□□□ -1.53
SWA2YDR320C PSD2P53037 1138 aaKnown RBP5.48□□□□□ -1.53
SWA2YDR320C MSB4Q12317 492 aa5.47□□□□□ -1.53
SWA2YDR320C ULI1P43604 169 aa5.47□□□□□ -1.53
SWA2YDR320C YLR271WQ06152 274 aa5.46□□□□□ -1.54
SWA2YDR320C BMT6Q12291 365 aa5.46□□□□□ -1.54
SWA2YDR320C EAP1P36041 632 aaKnown RBP5.43□□□□□ -1.54
SWA2YDR320C TFA1P36100 482 aa5.4□□□□□ -1.55
SWA2YDR320C PIB1Q06651 286 aa5.38□□□□□ -1.55
SWA2YDR320C YOL036WQ08206 761 aa5.37□□□□□ -1.55
SWA2YDR320C MRM1P25270 412 aa5.36□□□□□ -1.55
SWA2YDR320C RTG1P32607 177 aa5.35□□□□□ -1.55
SWA2YDR320C SEC61P32915 480 aa5.35□□□□□ -1.55
SWA2YDR320C TRP5P00931 707 aaKnown RBP5.34□□□□□ -1.55
SWA2YDR320C YMR1P47147 688 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SWA2YDR320C YNL035CP53962 389 aaKnown RBP5.33□□□□□ -1.56
SWA2YDR320C SAM3Q08986 587 aa5.32□□□□□ -1.56
SWA2YDR320C NCR1Q12200 1170 aa5.32□□□□□ -1.56
SWA2YDR320C SET4P42948 560 aa5.31□□□□□ -1.56
SWA2YDR320C VPS29P38759 282 aa5.31□□□□□ -1.56
SWA2YDR320C VMA1P17255 1071 aaKnown RBP5.3□□□□□ -1.56
SWA2YDR320C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SWA2YDR320C DBP1P24784 617 aaKnown RBP5.28□□□□□ -1.56
SWA2YDR320C SSP1P38871 571 aa5.27□□□□□ -1.57
SWA2YDR320C RTG3P38165 486 aa5.26□□□□□ -1.57
SWA2YDR320C ABP1P15891 592 aaKnown RBP5.26□□□□□ -1.57
SWA2YDR320C STS1P38637 319 aa5.26□□□□□ -1.57
SWA2YDR320C DAN4P47179 1161 aa5.26□□□□□ -1.57
SWA2YDR320C JIP4Q03361 876 aa5.24□□□□□ -1.57
SWA2YDR320C CST9Q06032 482 aa5.23□□□□□ -1.57
SWA2YDR320C MGA2P40578 1113 aa5.22□□□□□ -1.57
SWA2YDR320C TFG1P41895 735 aaPredicted RBP5.21□□□□□ -1.57
SWA2YDR320C YFR006WP43590 535 aa5.21□□□□□ -1.57
SWA2YDR320C BCK2P33306 851 aa5.21□□□□□ -1.58
SWA2YDR320C CHL1P22516 861 aaPredicted RBP5.19□□□□□ -1.58
SWA2YDR320C YDL129WQ07555 291 aa5.19□□□□□ -1.58
SWA2YDR320C SAP30P38429 201 aa5.18□□□□□ -1.58
SWA2YDR320C PRE3P38624 215 aa5.17□□□□□ -1.58
SWA2YDR320C HTA1P04911 132 aaKnown RBP5.16□□□□□ -1.58
SWA2YDR320C HTA2P04912 132 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 376.4 ms