RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W MTC1P47018 478 aaKnown RBP12.82□□□□□ -0.36
VMA21YGR105W DRS1P32892 752 aaKnown RBP12.46□□□□□ -0.41
VMA21YGR105W FAP1P53971 965 aa11.05□□□□□ -0.64
VMA21YGR105W DIP2Q12220 943 aaPredicted RBP10.75□□□□□ -0.69
VMA21YGR105W BFR2Q06631 534 aaKnown RBP10.58□□□□□ -0.72
VMA21YGR105W PRI1P10363 409 aa10.56□□□□□ -0.72
VMA21YGR105W ISW2Q08773 1120 aa10.52□□□□□ -0.73
VMA21YGR105W AVT3P36062 692 aa10.48□□□□□ -0.73
VMA21YGR105W RPG1P38249 964 aaKnown RBP10.43□□□□□ -0.74
VMA21YGR105W AAD16Q02895 342 aa10.43□□□□□ -0.74
VMA21YGR105W PRY3P47033 881 aa10.37□□□□□ -0.75
VMA21YGR105W RSE1Q04693 1361 aaKnown RBP10.26□□□□□ -0.77
VMA21YGR105W TSR3Q12094 313 aaKnown RBP10.03□□□□□ -0.8
VMA21YGR105W RPL17AP05740 184 aaKnown RBP9.92□□□□□ -0.82
VMA21YGR105W RPL17BP46990 184 aaKnown RBP9.92□□□□□ -0.82
VMA21YGR105W REB1P21538 810 aa9.83□□□□□ -0.84
VMA21YGR105W YCK3P39962 524 aa9.8□□□□□ -0.84
VMA21YGR105W HAA1Q12753 694 aaKnown RBP9.71□□□□□ -0.86
VMA21YGR105W TFA1P36100 482 aa9.62□□□□□ -0.87
VMA21YGR105W MRPL32P25348 183 aa9.61□□□□□ -0.87
VMA21YGR105W SPT21P35209 758 aa9.5□□□□□ -0.89
VMA21YGR105W YKR023WP36119 530 aaKnown RBP9.32□□□□□ -0.92
VMA21YGR105W RIM101P33400 625 aa9.28□□□□□ -0.92
VMA21YGR105W CDC27P38042 758 aa9.23□□□□□ -0.93
VMA21YGR105W HOP09932 586 aa9.15□□□□□ -0.94
VMA21YGR105W TFC8Q12308 588 aa9.11□□□□□ -0.95
VMA21YGR105W DCD1P06773 312 aa9.1□□□□□ -0.95
VMA21YGR105W YGL015CP33199 130 aa9.07□□□□□ -0.96
VMA21YGR105W OXP1P28273 1286 aa9□□□□□ -0.97
VMA21YGR105W MAP2P38174 421 aaKnown RBP8.89□□□□□ -0.99
VMA21YGR105W YIL055CP40523 627 aaKnown RBP8.86□□□□□ -0.99
VMA21YGR105W UBP10P53874 792 aaPredicted RBP8.86□□□□□ -0.99
VMA21YGR105W BCH2P36122 765 aa8.84□□□□□ -0.99
VMA21YGR105W PTP3P40048 928 aa8.84□□□□□ -0.99
VMA21YGR105W YAH1Q12184 172 aaKnown RBP8.83□□□□□ -1
VMA21YGR105W SCY1P53009 804 aa8.8□□□□□ -1
VMA21YGR105W RSM7P47150 247 aa8.72□□□□□ -1.01
VMA21YGR105W SSP1P38871 571 aa8.67□□□□□ -1.02
VMA21YGR105W YLR271WQ06152 274 aa8.67□□□□□ -1.02
VMA21YGR105W EPS1P40557 701 aa8.66□□□□□ -1.02
VMA21YGR105W SLX5P32828 619 aaKnown RBP8.63□□□□□ -1.03
VMA21YGR105W AI2P03876 854 aa8.61□□□□□ -1.03
VMA21YGR105W BDF1P35817 686 aa8.6□□□□□ -1.03
VMA21YGR105W BBC1P47068 1157 aa8.56□□□□□ -1.04
VMA21YGR105W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
VMA21YGR105W TIF4632P39936 914 aaKnown RBP8.49□□□□□ -1.05
VMA21YGR105W PSD2P53037 1138 aaKnown RBP8.47□□□□□ -1.05
VMA21YGR105W TGL3P40308 642 aa8.45□□□□□ -1.06
VMA21YGR105W CST9Q06032 482 aa8.4□□□□□ -1.06
VMA21YGR105W MGA2P40578 1113 aa8.39□□□□□ -1.07
VMA21YGR105W MRM1P25270 412 aa8.34□□□□□ -1.07
VMA21YGR105W NSR1P27476 414 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
VMA21YGR105W RTG3P38165 486 aa8.17□□□□□ -1.1
VMA21YGR105W YAP5P40574 245 aa8.17□□□□□ -1.1
VMA21YGR105W YOR238WQ08634 303 aa8.17□□□□□ -1.1
VMA21YGR105W RCR1P38212 213 aa8.16□□□□□ -1.1
VMA21YGR105W MST1P07236 462 aa8.14□□□□□ -1.11
VMA21YGR105W VPS29P38759 282 aa8.13□□□□□ -1.11
VMA21YGR105W PIB1Q06651 286 aa8.11□□□□□ -1.11
VMA21YGR105W BUD31P25337 157 aaPredicted RBP8.1□□□□□ -1.11
VMA21YGR105W YMR1P47147 688 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
VMA21YGR105W UBP9P39967 754 aa8.05□□□□□ -1.12
VMA21YGR105W YFR006WP43590 535 aa8.05□□□□□ -1.12
VMA21YGR105W DBP1P24784 617 aaKnown RBP8.04□□□□□ -1.12
VMA21YGR105W STS1P38637 319 aa8.03□□□□□ -1.12
VMA21YGR105W RAM2P29703 316 aa8.01□□□□□ -1.13
VMA21YGR105W GTT3P39996 337 aa7.99□□□□□ -1.13
VMA21YGR105W YBL029C-AQ3E756 94 aa7.98□□□□□ -1.13
VMA21YGR105W WSC3Q12215 556 aa7.96□□□□□ -1.14
VMA21YGR105W MAK11P20484 414 aaKnown RBP7.91□□□□□ -1.14
VMA21YGR105W VMA1P17255 1071 aaKnown RBP7.9□□□□□ -1.14
VMA21YGR105W VNX1P42839 908 aa7.9□□□□□ -1.14
VMA21YGR105W MIF2P35201 549 aa7.85□□□□□ -1.15
VMA21YGR105W SPP1Q03012 353 aa7.84□□□□□ -1.15
VMA21YGR105W YOL036WQ08206 761 aa7.83□□□□□ -1.16
VMA21YGR105W EDS1P38073 919 aa7.82□□□□□ -1.16
VMA21YGR105W SET4P42948 560 aa7.82□□□□□ -1.16
VMA21YGR105W SAM3Q08986 587 aa7.82□□□□□ -1.16
VMA21YGR105W COQ8P27697 501 aa7.81□□□□□ -1.16
VMA21YGR105W TIF11P38912 153 aaKnown RBP7.8□□□□□ -1.16
VMA21YGR105W SIS1P25294 352 aaKnown RBP7.79□□□□□ -1.16
VMA21YGR105W DMA1P38823 416 aa7.79□□□□□ -1.16
VMA21YGR105W MSB4Q12317 492 aa7.78□□□□□ -1.16
VMA21YGR105W ULI1P43604 169 aa7.76□□□□□ -1.17
VMA21YGR105W GYP5Q12344 894 aa7.76□□□□□ -1.17
VMA21YGR105W PTC3P34221 468 aaKnown RBP7.75□□□□□ -1.17
VMA21YGR105W SET1P38827 1080 aaKnown RBP7.73□□□□□ -1.17
VMA21YGR105W EAP1P36041 632 aaKnown RBP7.72□□□□□ -1.17
VMA21YGR105W TRP5P00931 707 aaKnown RBP7.71□□□□□ -1.18
VMA21YGR105W DCW1P36091 449 aa7.71□□□□□ -1.18
VMA21YGR105W GRE2Q12068 342 aaKnown RBP7.71□□□□□ -1.18
VMA21YGR105W IOC2Q12072 812 aa7.71□□□□□ -1.18
VMA21YGR105W ATH1P48016 1211 aa7.68□□□□□ -1.18
VMA21YGR105W LDB19Q12502 818 aa7.68□□□□□ -1.18
VMA21YGR105W NOP53Q12080 455 aaKnown RBP7.67□□□□□ -1.18
VMA21YGR105W HTA1P04911 132 aaKnown RBP7.66□□□□□ -1.18
VMA21YGR105W HTA2P04912 132 aa7.66□□□□□ -1.18
VMA21YGR105W ABP1P15891 592 aaKnown RBP7.66□□□□□ -1.18
VMA21YGR105W GUT1P32190 709 aa7.65□□□□□ -1.18
VMA21YGR105W RQC2Q12532 1038 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms