RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W DRS1P32892 752 aaKnown RBP6.27□□□□□ -1.41
HRD3YLR207W MTC1P47018 478 aaKnown RBP5.88□□□□□ -1.47
HRD3YLR207W BFR2Q06631 534 aaKnown RBP5.58□□□□□ -1.52
HRD3YLR207W TFA1P36100 482 aa5.4□□□□□ -1.54
HRD3YLR207W DIP2Q12220 943 aaPredicted RBP5.22□□□□□ -1.57
HRD3YLR207W AVT3P36062 692 aa5.17□□□□□ -1.58
HRD3YLR207W RQC2Q12532 1038 aaKnown RBP5.07□□□□□ -1.6
HRD3YLR207W RSE1Q04693 1361 aaKnown RBP4.86□□□□□ -1.63
HRD3YLR207W ISW2Q08773 1120 aa4.78□□□□□ -1.64
HRD3YLR207W RPG1P38249 964 aaKnown RBP4.67□□□□□ -1.66
HRD3YLR207W RPL17AP05740 184 aaKnown RBP4.66□□□□□ -1.66
HRD3YLR207W RPL17BP46990 184 aaKnown RBP4.66□□□□□ -1.66
HRD3YLR207W REB1P21538 810 aa4.61□□□□□ -1.67
HRD3YLR207W DMA1P38823 416 aa4.61□□□□□ -1.67
HRD3YLR207W PTP3P40048 928 aa4.57□□□□□ -1.68
HRD3YLR207W FAP1P53971 965 aa4.56□□□□□ -1.68
HRD3YLR207W TAF7Q05021 590 aa4.56□□□□□ -1.68
HRD3YLR207W PRI1P10363 409 aa4.53□□□□□ -1.68
HRD3YLR207W AAD16Q02895 342 aa4.45□□□□□ -1.7
HRD3YLR207W RIM101P33400 625 aa4.45□□□□□ -1.7
HRD3YLR207W SSP1P38871 571 aa4.44□□□□□ -1.7
HRD3YLR207W SPT21P35209 758 aa4.41□□□□□ -1.7
HRD3YLR207W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
HRD3YLR207W YAH1Q12184 172 aaKnown RBP4.38□□□□□ -1.71
HRD3YLR207W YIL055CP40523 627 aaKnown RBP4.37□□□□□ -1.71
HRD3YLR207W TSR3Q12094 313 aaKnown RBP4.36□□□□□ -1.71
HRD3YLR207W LEO1P38439 464 aa4.35□□□□□ -1.71
HRD3YLR207W OXP1P28273 1286 aa4.31□□□□□ -1.72
HRD3YLR207W YLR271WQ06152 274 aa4.26□□□□□ -1.73
HRD3YLR207W MGA2P40578 1113 aa4.25□□□□□ -1.73
HRD3YLR207W RSM7P47150 247 aa4.24□□□□□ -1.73
HRD3YLR207W MRPL32P25348 183 aa4.23□□□□□ -1.73
HRD3YLR207W PRY3P47033 881 aa4.23□□□□□ -1.73
HRD3YLR207W LEU3P08638 886 aa4.21□□□□□ -1.74
HRD3YLR207W YKR023WP36119 530 aaKnown RBP4.21□□□□□ -1.74
HRD3YLR207W SAS10Q12136 610 aaPredicted RBP4.19□□□□□ -1.74
HRD3YLR207W HOP09932 586 aa4.18□□□□□ -1.74
HRD3YLR207W TFC8Q12308 588 aa4.15□□□□□ -1.74
HRD3YLR207W CST9Q06032 482 aa4.15□□□□□ -1.75
HRD3YLR207W BBC1P47068 1157 aa4.14□□□□□ -1.75
HRD3YLR207W AI2P03876 854 aa4.14□□□□□ -1.75
HRD3YLR207W DCD1P06773 312 aa4.12□□□□□ -1.75
HRD3YLR207W SPB4P25808 606 aaPredicted RBP4.11□□□□□ -1.75
HRD3YLR207W RPN1P38764 993 aaKnown RBP4.11□□□□□ -1.75
HRD3YLR207W PSD2P53037 1138 aaKnown RBP4.1□□□□□ -1.75
HRD3YLR207W CKB1P43639 278 aa4.07□□□□□ -1.76
HRD3YLR207W SET1P38827 1080 aaKnown RBP4.06□□□□□ -1.76
HRD3YLR207W IFH1P39520 1085 aa4.06□□□□□ -1.76
HRD3YLR207W CDC27P38042 758 aa4.05□□□□□ -1.76
HRD3YLR207W VPS70P47161 811 aa4.05□□□□□ -1.76
HRD3YLR207W BCH2P36122 765 aa4.04□□□□□ -1.76
HRD3YLR207W MRM1P25270 412 aa4.03□□□□□ -1.76
HRD3YLR207W DMA2P53924 522 aa4.03□□□□□ -1.76
HRD3YLR207W RAM2P29703 316 aa4.03□□□□□ -1.76
HRD3YLR207W EPS1P40557 701 aa4.01□□□□□ -1.77
HRD3YLR207W RTG3P38165 486 aa4.01□□□□□ -1.77
HRD3YLR207W HAA1Q12753 694 aaKnown RBP3.99□□□□□ -1.77
HRD3YLR207W YPR148CQ06523 435 aa3.98□□□□□ -1.77
HRD3YLR207W HGH1P48362 394 aaKnown RBP3.98□□□□□ -1.77
HRD3YLR207W MAK11P20484 414 aaKnown RBP3.97□□□□□ -1.77
HRD3YLR207W BDF1P35817 686 aa3.96□□□□□ -1.77
HRD3YLR207W RCR1P38212 213 aa3.96□□□□□ -1.78
HRD3YLR207W PBS2P08018 668 aa3.95□□□□□ -1.78
HRD3YLR207W SCY1P53009 804 aa3.95□□□□□ -1.78
HRD3YLR207W RLF2Q12495 606 aa3.95□□□□□ -1.78
HRD3YLR207W DSF2P38213 736 aa3.93□□□□□ -1.78
HRD3YLR207W YNR021WP53723 404 aaKnown RBP3.92□□□□□ -1.78
HRD3YLR207W KIN1P13185 1064 aa3.92□□□□□ -1.78
HRD3YLR207W COQ8P27697 501 aa3.92□□□□□ -1.78
HRD3YLR207W MAM3Q12296 706 aa3.92□□□□□ -1.78
HRD3YLR207W MIF2P35201 549 aa3.91□□□□□ -1.78
HRD3YLR207W REF2P42073 533 aaPredicted RBP3.9□□□□□ -1.79
HRD3YLR207W NOP53Q12080 455 aaKnown RBP3.89□□□□□ -1.79
HRD3YLR207W GLC3P32775 704 aa3.88□□□□□ -1.79
HRD3YLR207W YMR1P47147 688 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
HRD3YLR207W UBP10P53874 792 aaPredicted RBP3.88□□□□□ -1.79
HRD3YLR207W VPS29P38759 282 aa3.88□□□□□ -1.79
HRD3YLR207W IES2P40154 320 aa3.88□□□□□ -1.79
HRD3YLR207W ATF2P53296 535 aa3.88□□□□□ -1.79
HRD3YLR207W SLX5P32828 619 aaKnown RBP3.87□□□□□ -1.79
HRD3YLR207W MAP2P38174 421 aaKnown RBP3.87□□□□□ -1.79
HRD3YLR207W AIM7Q12156 149 aa3.87□□□□□ -1.79
HRD3YLR207W INO80P53115 1489 aa3.86□□□□□ -1.79
HRD3YLR207W MAK21Q12176 1025 aaKnown RBP3.86□□□□□ -1.79
HRD3YLR207W DBP1P24784 617 aaKnown RBP3.84□□□□□ -1.79
HRD3YLR207W YCK3P39962 524 aa3.84□□□□□ -1.79
HRD3YLR207W YFR006WP43590 535 aa3.84□□□□□ -1.79
HRD3YLR207W YGL015CP33199 130 aa3.83□□□□□ -1.8
HRD3YLR207W DIT2P21595 489 aa3.83□□□□□ -1.8
HRD3YLR207W YOR238WQ08634 303 aa3.82□□□□□ -1.8
HRD3YLR207W COX6P00427 148 aa3.82□□□□□ -1.8
HRD3YLR207W EDS1P38073 919 aa3.82□□□□□ -1.8
HRD3YLR207W STS1P38637 319 aa3.82□□□□□ -1.8
HRD3YLR207W KIC1P38692 1080 aa3.81□□□□□ -1.8
HRD3YLR207W SGS1P35187 1447 aa3.81□□□□□ -1.8
HRD3YLR207W PTC3P34221 468 aaKnown RBP3.81□□□□□ -1.8
HRD3YLR207W NUP42P49686 430 aaKnown RBP3.81□□□□□ -1.8
HRD3YLR207W ABP1P15891 592 aaKnown RBP3.8□□□□□ -1.8
HRD3YLR207W GUA1P38625 525 aaKnown RBP3.8□□□□□ -1.8
HRD3YLR207W BRL1P38770 471 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms