RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeastyeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKA1YIL035C MTC1P47018 478 aaKnown RBP16.35■□□□□ 0.21
CKA1YIL035C FAP1P53971 965 aa15.94■□□□□ 0.14
CKA1YIL035C PRY3P47033 881 aa15□□□□□ -0.01
CKA1YIL035C AAD16Q02895 342 aa14.41□□□□□ -0.1
CKA1YIL035C PRI1P10363 409 aa14.36□□□□□ -0.11
CKA1YIL035C DRS1P32892 752 aaKnown RBP14.32□□□□□ -0.12
CKA1YIL035C YCK3P39962 524 aa14.09□□□□□ -0.15
CKA1YIL035C HAA1Q12753 694 aaKnown RBP13.96□□□□□ -0.17
CKA1YIL035C ISW2Q08773 1120 aa13.79□□□□□ -0.2
CKA1YIL035C RPG1P38249 964 aaKnown RBP13.72□□□□□ -0.21
CKA1YIL035C TSR3Q12094 313 aaKnown RBP13.57□□□□□ -0.24
CKA1YIL035C MRPL32P25348 183 aa13.02□□□□□ -0.33
CKA1YIL035C DIP2Q12220 943 aaPredicted RBP12.92□□□□□ -0.34
CKA1YIL035C YGL015CP33199 130 aa12.75□□□□□ -0.37
CKA1YIL035C RSE1Q04693 1361 aaKnown RBP12.75□□□□□ -0.37
CKA1YIL035C REB1P21538 810 aa12.47□□□□□ -0.41
CKA1YIL035C RPL17AP05740 184 aaKnown RBP12.44□□□□□ -0.42
CKA1YIL035C RPL17BP46990 184 aaKnown RBP12.44□□□□□ -0.42
CKA1YIL035C CDC27P38042 758 aa12.18□□□□□ -0.46
CKA1YIL035C AVT3P36062 692 aa12.12□□□□□ -0.47
CKA1YIL035C BUD31P25337 157 aaPredicted RBP12.09□□□□□ -0.47
CKA1YIL035C MAP2P38174 421 aaKnown RBP11.92□□□□□ -0.5
CKA1YIL035C BFR2Q06631 534 aaKnown RBP11.91□□□□□ -0.5
CKA1YIL035C YKR023WP36119 530 aaKnown RBP11.9□□□□□ -0.5
CKA1YIL035C UBP10P53874 792 aaPredicted RBP11.89□□□□□ -0.51
CKA1YIL035C SPT21P35209 758 aa11.75□□□□□ -0.53
CKA1YIL035C HOP09932 586 aa11.71□□□□□ -0.53
CKA1YIL035C DCD1P06773 312 aa11.7□□□□□ -0.54
CKA1YIL035C TFC8Q12308 588 aa11.65□□□□□ -0.54
CKA1YIL035C SCY1P53009 804 aa11.51□□□□□ -0.57
CKA1YIL035C SIS1P25294 352 aaKnown RBP11.48□□□□□ -0.57
CKA1YIL035C TIF4632P39936 914 aaKnown RBP11.46□□□□□ -0.57
CKA1YIL035C TGL3P40308 642 aa11.42□□□□□ -0.58
CKA1YIL035C SLX5P32828 619 aaKnown RBP11.4□□□□□ -0.58
CKA1YIL035C UBP9P39967 754 aa11.39□□□□□ -0.59
CKA1YIL035C BCH2P36122 765 aa11.25□□□□□ -0.61
CKA1YIL035C RIM101P33400 625 aa11.15□□□□□ -0.62
CKA1YIL035C EPS1P40557 701 aa10.88□□□□□ -0.67
CKA1YIL035C BDF1P35817 686 aa10.87□□□□□ -0.67
CKA1YIL035C YBL029C-AQ3E756 94 aa10.84□□□□□ -0.67
CKA1YIL035C MST1P07236 462 aa10.79□□□□□ -0.68
CKA1YIL035C OXP1P28273 1286 aa10.77□□□□□ -0.69
CKA1YIL035C YOR238WQ08634 303 aa10.75□□□□□ -0.69
CKA1YIL035C TFA1P36100 482 aa10.7□□□□□ -0.7
CKA1YIL035C PTP3P40048 928 aa10.67□□□□□ -0.7
CKA1YIL035C VNX1P42839 908 aa10.66□□□□□ -0.7
CKA1YIL035C YIL055CP40523 627 aaKnown RBP10.65□□□□□ -0.7
CKA1YIL035C SPP1Q03012 353 aa10.58□□□□□ -0.72
CKA1YIL035C WSC3Q12215 556 aa10.56□□□□□ -0.72
CKA1YIL035C NSR1P27476 414 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
CKA1YIL035C YAP5P40574 245 aa10.52□□□□□ -0.73
CKA1YIL035C BBC1P47068 1157 aa10.51□□□□□ -0.73
CKA1YIL035C RSM7P47150 247 aa10.46□□□□□ -0.73
CKA1YIL035C AI2P03876 854 aa10.45□□□□□ -0.74
CKA1YIL035C YJL171CP46992 396 aa10.42□□□□□ -0.74
CKA1YIL035C AIR2Q12476 344 aaKnown RBP10.42□□□□□ -0.74
CKA1YIL035C TIF11P38912 153 aaKnown RBP10.39□□□□□ -0.75
CKA1YIL035C YAH1Q12184 172 aaKnown RBP10.37□□□□□ -0.75
CKA1YIL035C GTT3P39996 337 aa10.35□□□□□ -0.75
CKA1YIL035C FKH1P40466 484 aa10.33□□□□□ -0.76
CKA1YIL035C LDB19Q12502 818 aa10.26□□□□□ -0.77
CKA1YIL035C ULI1P43604 169 aa10.23□□□□□ -0.77
CKA1YIL035C PIB1Q06651 286 aa10.23□□□□□ -0.77
CKA1YIL035C IOC2Q12072 812 aa10.19□□□□□ -0.78
CKA1YIL035C BMT6Q12291 365 aa10.18□□□□□ -0.78
CKA1YIL035C YLR271WQ06152 274 aa10.1□□□□□ -0.79
CKA1YIL035C MRM1P25270 412 aa10.04□□□□□ -0.8
CKA1YIL035C PSD2P53037 1138 aaKnown RBP10.02□□□□□ -0.81
CKA1YIL035C MSB4Q12317 492 aa10□□□□□ -0.81
CKA1YIL035C EAP1P36041 632 aaKnown RBP9.99□□□□□ -0.81
CKA1YIL035C RTG1P32607 177 aa9.98□□□□□ -0.81
CKA1YIL035C SET4P42948 560 aa9.97□□□□□ -0.81
CKA1YIL035C NCR1Q12200 1170 aa9.95□□□□□ -0.82
CKA1YIL035C TRP5P00931 707 aaKnown RBP9.94□□□□□ -0.82
CKA1YIL035C YOL036WQ08206 761 aa9.93□□□□□ -0.82
CKA1YIL035C YNL035CP53962 389 aaKnown RBP9.85□□□□□ -0.83
CKA1YIL035C DBP1P24784 617 aaKnown RBP9.84□□□□□ -0.83
CKA1YIL035C YFR006WP43590 535 aa9.84□□□□□ -0.83
CKA1YIL035C YMR1P47147 688 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
CKA1YIL035C SEC61P32915 480 aa9.82□□□□□ -0.84
CKA1YIL035C SSP1P38871 571 aa9.82□□□□□ -0.84
CKA1YIL035C VPS29P38759 282 aa9.81□□□□□ -0.84
CKA1YIL035C VMA1P17255 1071 aaKnown RBP9.76□□□□□ -0.85
CKA1YIL035C TFG1P41895 735 aaPredicted RBP9.75□□□□□ -0.85
CKA1YIL035C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
CKA1YIL035C RTG3P38165 486 aa9.73□□□□□ -0.85
CKA1YIL035C STS1P38637 319 aa9.72□□□□□ -0.85
CKA1YIL035C CST9Q06032 482 aa9.71□□□□□ -0.86
CKA1YIL035C SAM3Q08986 587 aa9.71□□□□□ -0.86
CKA1YIL035C SAP30P38429 201 aa9.7□□□□□ -0.86
CKA1YIL035C DAN4P47179 1161 aa9.65□□□□□ -0.86
CKA1YIL035C BCK2P33306 851 aa9.64□□□□□ -0.87
CKA1YIL035C JIP4Q03361 876 aa9.61□□□□□ -0.87
CKA1YIL035C YDL129WQ07555 291 aa9.6□□□□□ -0.87
CKA1YIL035C CHL1P22516 861 aaPredicted RBP9.59□□□□□ -0.87
CKA1YIL035C GYP5Q12344 894 aa9.59□□□□□ -0.87
CKA1YIL035C RCR1P38212 213 aa9.57□□□□□ -0.88
CKA1YIL035C MGA2P40578 1113 aa9.57□□□□□ -0.88
CKA1YIL035C DCW1P36091 449 aa9.55□□□□□ -0.88
CKA1YIL035C HTA1P04911 132 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms