RNA–Protein interactions for RNA: YGR161C

RTS3, Transcript of Putative component of the protein phosphatase type 2A complex, yeastyeast

Gene RTS3, Length 792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTS3YGR161C MTC1P47018 478 aaKnown RBP11.74□□□□□ -0.53
RTS3YGR161C DRS1P32892 752 aaKnown RBP11.27□□□□□ -0.61
RTS3YGR161C FAP1P53971 965 aa10.27□□□□□ -0.77
RTS3YGR161C DIP2Q12220 943 aaPredicted RBP9.76□□□□□ -0.85
RTS3YGR161C PRI1P10363 409 aa9.73□□□□□ -0.85
RTS3YGR161C PRY3P47033 881 aa9.65□□□□□ -0.86
RTS3YGR161C ISW2Q08773 1120 aa9.63□□□□□ -0.87
RTS3YGR161C AAD16Q02895 342 aa9.62□□□□□ -0.87
RTS3YGR161C RPG1P38249 964 aaKnown RBP9.56□□□□□ -0.88
RTS3YGR161C BFR2Q06631 534 aaKnown RBP9.49□□□□□ -0.89
RTS3YGR161C AVT3P36062 692 aa9.48□□□□□ -0.89
RTS3YGR161C RSE1Q04693 1361 aaKnown RBP9.33□□□□□ -0.92
RTS3YGR161C TSR3Q12094 313 aaKnown RBP9.26□□□□□ -0.93
RTS3YGR161C YCK3P39962 524 aa9.15□□□□□ -0.94
RTS3YGR161C RPL17AP05740 184 aaKnown RBP9.06□□□□□ -0.96
RTS3YGR161C RPL17BP46990 184 aaKnown RBP9.06□□□□□ -0.96
RTS3YGR161C HAA1Q12753 694 aaKnown RBP8.99□□□□□ -0.97
RTS3YGR161C REB1P21538 810 aa8.97□□□□□ -0.97
RTS3YGR161C MRPL32P25348 183 aa8.82□□□□□ -1
RTS3YGR161C SPT21P35209 758 aa8.69□□□□□ -1.02
RTS3YGR161C YKR023WP36119 530 aaKnown RBP8.53□□□□□ -1.04
RTS3YGR161C TFA1P36100 482 aa8.52□□□□□ -1.05
RTS3YGR161C CDC27P38042 758 aa8.51□□□□□ -1.05
RTS3YGR161C RIM101P33400 625 aa8.41□□□□□ -1.06
RTS3YGR161C DCD1P06773 312 aa8.38□□□□□ -1.07
RTS3YGR161C HOP09932 586 aa8.38□□□□□ -1.07
RTS3YGR161C YGL015CP33199 130 aa8.35□□□□□ -1.07
RTS3YGR161C TFC8Q12308 588 aa8.34□□□□□ -1.07
RTS3YGR161C MAP2P38174 421 aaKnown RBP8.19□□□□□ -1.1
RTS3YGR161C OXP1P28273 1286 aa8.18□□□□□ -1.1
RTS3YGR161C UBP10P53874 792 aaPredicted RBP8.15□□□□□ -1.1
RTS3YGR161C BCH2P36122 765 aa8.09□□□□□ -1.11
RTS3YGR161C SCY1P53009 804 aa8.08□□□□□ -1.12
RTS3YGR161C PTP3P40048 928 aa8.03□□□□□ -1.12
RTS3YGR161C YIL055CP40523 627 aaKnown RBP8.01□□□□□ -1.13
RTS3YGR161C YAH1Q12184 172 aaKnown RBP8□□□□□ -1.13
RTS3YGR161C SLX5P32828 619 aaKnown RBP7.92□□□□□ -1.14
RTS3YGR161C EPS1P40557 701 aa7.91□□□□□ -1.14
RTS3YGR161C RSM7P47150 247 aa7.89□□□□□ -1.15
RTS3YGR161C BDF1P35817 686 aa7.86□□□□□ -1.15
RTS3YGR161C YLR271WQ06152 274 aa7.85□□□□□ -1.15
RTS3YGR161C AI2P03876 854 aa7.82□□□□□ -1.16
RTS3YGR161C TIF4632P39936 914 aaKnown RBP7.8□□□□□ -1.16
RTS3YGR161C SSP1P38871 571 aa7.79□□□□□ -1.16
RTS3YGR161C BBC1P47068 1157 aa7.77□□□□□ -1.17
RTS3YGR161C TGL3P40308 642 aa7.74□□□□□ -1.17
RTS3YGR161C PSD2P53037 1138 aaKnown RBP7.69□□□□□ -1.18
RTS3YGR161C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
RTS3YGR161C CST9Q06032 482 aa7.62□□□□□ -1.19
RTS3YGR161C MRM1P25270 412 aa7.57□□□□□ -1.2
RTS3YGR161C MGA2P40578 1113 aa7.56□□□□□ -1.2
RTS3YGR161C BUD31P25337 157 aaPredicted RBP7.55□□□□□ -1.2
RTS3YGR161C NSR1P27476 414 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
RTS3YGR161C YAP5P40574 245 aa7.47□□□□□ -1.21
RTS3YGR161C YOR238WQ08634 303 aa7.47□□□□□ -1.21
RTS3YGR161C MST1P07236 462 aa7.46□□□□□ -1.22
RTS3YGR161C PIB1Q06651 286 aa7.43□□□□□ -1.22
RTS3YGR161C RCR1P38212 213 aa7.42□□□□□ -1.22
RTS3YGR161C UBP9P39967 754 aa7.41□□□□□ -1.22
RTS3YGR161C RTG3P38165 486 aa7.38□□□□□ -1.23
RTS3YGR161C VPS29P38759 282 aa7.38□□□□□ -1.23
RTS3YGR161C YBL029C-AQ3E756 94 aa7.38□□□□□ -1.23
RTS3YGR161C YFR006WP43590 535 aa7.34□□□□□ -1.23
RTS3YGR161C STS1P38637 319 aa7.32□□□□□ -1.24
RTS3YGR161C YMR1P47147 688 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
RTS3YGR161C DBP1P24784 617 aaKnown RBP7.31□□□□□ -1.24
RTS3YGR161C GTT3P39996 337 aa7.31□□□□□ -1.24
RTS3YGR161C WSC3Q12215 556 aa7.31□□□□□ -1.24
RTS3YGR161C VNX1P42839 908 aa7.27□□□□□ -1.25
RTS3YGR161C RAM2P29703 316 aa7.24□□□□□ -1.25
RTS3YGR161C SIS1P25294 352 aaKnown RBP7.22□□□□□ -1.25
RTS3YGR161C VMA1P17255 1071 aaKnown RBP7.21□□□□□ -1.26
RTS3YGR161C SPP1Q03012 353 aa7.2□□□□□ -1.26
RTS3YGR161C SET4P42948 560 aa7.16□□□□□ -1.26
RTS3YGR161C YOL036WQ08206 761 aa7.16□□□□□ -1.26
RTS3YGR161C TIF11P38912 153 aaKnown RBP7.15□□□□□ -1.26
RTS3YGR161C MAK11P20484 414 aaKnown RBP7.13□□□□□ -1.27
RTS3YGR161C SAM3Q08986 587 aa7.12□□□□□ -1.27
RTS3YGR161C MIF2P35201 549 aa7.1□□□□□ -1.27
RTS3YGR161C ULI1P43604 169 aa7.1□□□□□ -1.27
RTS3YGR161C MSB4Q12317 492 aa7.09□□□□□ -1.27
RTS3YGR161C EDS1P38073 919 aa7.08□□□□□ -1.28
RTS3YGR161C IOC2Q12072 812 aa7.06□□□□□ -1.28
RTS3YGR161C LDB19Q12502 818 aa7.06□□□□□ -1.28
RTS3YGR161C TRP5P00931 707 aaKnown RBP7.05□□□□□ -1.28
RTS3YGR161C COQ8P27697 501 aa7.05□□□□□ -1.28
RTS3YGR161C GYP5Q12344 894 aa7.05□□□□□ -1.28
RTS3YGR161C EAP1P36041 632 aaKnown RBP7.03□□□□□ -1.28
RTS3YGR161C FKH1P40466 484 aa7.03□□□□□ -1.28
RTS3YGR161C DCW1P36091 449 aa7.02□□□□□ -1.29
RTS3YGR161C PTC3P34221 468 aaKnown RBP7.01□□□□□ -1.29
RTS3YGR161C GRE2Q12068 342 aaKnown RBP6.99□□□□□ -1.29
RTS3YGR161C AIR2Q12476 344 aaKnown RBP6.99□□□□□ -1.29
RTS3YGR161C HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
RTS3YGR161C HTA2P04912 132 aa6.96□□□□□ -1.3
RTS3YGR161C RTG1P32607 177 aa6.96□□□□□ -1.3
RTS3YGR161C ABP1P15891 592 aaKnown RBP6.95□□□□□ -1.3
RTS3YGR161C ATH1P48016 1211 aa6.95□□□□□ -1.3
RTS3YGR161C YEL023CP39992 682 aa6.93□□□□□ -1.3
RTS3YGR161C YNL035CP53962 389 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms