RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A MTC1P47018 478 aaKnown RBP13.35□□□□□ -0.27
SFT1YKL006C-A DRS1P32892 752 aaKnown RBP12.94□□□□□ -0.34
SFT1YKL006C-A FAP1P53971 965 aa11.68□□□□□ -0.54
SFT1YKL006C-A DIP2Q12220 943 aaPredicted RBP11.19□□□□□ -0.62
SFT1YKL006C-A ISW2Q08773 1120 aa11.04□□□□□ -0.64
SFT1YKL006C-A PRI1P10363 409 aa11.02□□□□□ -0.65
SFT1YKL006C-A BFR2Q06631 534 aaKnown RBP10.96□□□□□ -0.65
SFT1YKL006C-A AAD16Q02895 342 aa10.94□□□□□ -0.66
SFT1YKL006C-A PRY3P47033 881 aa10.92□□□□□ -0.66
SFT1YKL006C-A RPG1P38249 964 aaKnown RBP10.91□□□□□ -0.66
SFT1YKL006C-A AVT3P36062 692 aa10.83□□□□□ -0.68
SFT1YKL006C-A RSE1Q04693 1361 aaKnown RBP10.7□□□□□ -0.7
SFT1YKL006C-A TSR3Q12094 313 aaKnown RBP10.49□□□□□ -0.73
SFT1YKL006C-A RPL17AP05740 184 aaKnown RBP10.35□□□□□ -0.75
SFT1YKL006C-A RPL17BP46990 184 aaKnown RBP10.35□□□□□ -0.75
SFT1YKL006C-A REB1P21538 810 aa10.3□□□□□ -0.76
SFT1YKL006C-A HAA1Q12753 694 aaKnown RBP10.24□□□□□ -0.77
SFT1YKL006C-A YCK3P39962 524 aa10.17□□□□□ -0.78
SFT1YKL006C-A MRPL32P25348 183 aa10.11□□□□□ -0.79
SFT1YKL006C-A TFA1P36100 482 aa9.89□□□□□ -0.83
SFT1YKL006C-A SPT21P35209 758 aa9.82□□□□□ -0.84
SFT1YKL006C-A YKR023WP36119 530 aaKnown RBP9.66□□□□□ -0.86
SFT1YKL006C-A RIM101P33400 625 aa9.61□□□□□ -0.87
SFT1YKL006C-A CDC27P38042 758 aa9.59□□□□□ -0.87
SFT1YKL006C-A YGL015CP33199 130 aa9.57□□□□□ -0.88
SFT1YKL006C-A HOP09932 586 aa9.52□□□□□ -0.89
SFT1YKL006C-A TFC8Q12308 588 aa9.48□□□□□ -0.89
SFT1YKL006C-A DCD1P06773 312 aa9.46□□□□□ -0.9
SFT1YKL006C-A OXP1P28273 1286 aa9.31□□□□□ -0.92
SFT1YKL006C-A YIL055CP40523 627 aaKnown RBP9.29□□□□□ -0.92
SFT1YKL006C-A MAP2P38174 421 aaKnown RBP9.28□□□□□ -0.92
SFT1YKL006C-A UBP10P53874 792 aaPredicted RBP9.26□□□□□ -0.93
SFT1YKL006C-A PTP3P40048 928 aa9.23□□□□□ -0.93
SFT1YKL006C-A BCH2P36122 765 aa9.2□□□□□ -0.94
SFT1YKL006C-A SCY1P53009 804 aa9.19□□□□□ -0.94
SFT1YKL006C-A YAH1Q12184 172 aaKnown RBP9.18□□□□□ -0.94
SFT1YKL006C-A RSM7P47150 247 aa9.08□□□□□ -0.96
SFT1YKL006C-A SLX5P32828 619 aaKnown RBP9.04□□□□□ -0.96
SFT1YKL006C-A EPS1P40557 701 aa9□□□□□ -0.97
SFT1YKL006C-A SSP1P38871 571 aa8.99□□□□□ -0.97
SFT1YKL006C-A BBC1P47068 1157 aa8.98□□□□□ -0.97
SFT1YKL006C-A AI2P03876 854 aa8.96□□□□□ -0.98
SFT1YKL006C-A TIF4632P39936 914 aaKnown RBP8.96□□□□□ -0.98
SFT1YKL006C-A YLR271WQ06152 274 aa8.96□□□□□ -0.98
SFT1YKL006C-A BDF1P35817 686 aa8.95□□□□□ -0.98
SFT1YKL006C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
SFT1YKL006C-A TGL3P40308 642 aa8.86□□□□□ -0.99
SFT1YKL006C-A PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
SFT1YKL006C-A MGA2P40578 1113 aa8.72□□□□□ -1.01
SFT1YKL006C-A MRM1P25270 412 aa8.67□□□□□ -1.02
SFT1YKL006C-A CST9Q06032 482 aa8.67□□□□□ -1.02
SFT1YKL006C-A YOR238WQ08634 303 aa8.57□□□□□ -1.04
SFT1YKL006C-A YAP5P40574 245 aa8.56□□□□□ -1.04
SFT1YKL006C-A UBP9P39967 754 aa8.53□□□□□ -1.04
SFT1YKL006C-A BUD31P25337 157 aaPredicted RBP8.52□□□□□ -1.05
SFT1YKL006C-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05 RIP-Chip
SFT1YKL006C-A RTG3P38165 486 aa8.52□□□□□ -1.05
SFT1YKL006C-A MST1P07236 462 aa8.48□□□□□ -1.05
SFT1YKL006C-A PIB1Q06651 286 aa8.44□□□□□ -1.06
SFT1YKL006C-A RCR1P38212 213 aa8.42□□□□□ -1.06
SFT1YKL006C-A VPS29P38759 282 aa8.42□□□□□ -1.06
SFT1YKL006C-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SFT1YKL006C-A GTT3P39996 337 aa8.4□□□□□ -1.06
SFT1YKL006C-A DBP1P24784 617 aaKnown RBP8.38□□□□□ -1.07
SFT1YKL006C-A YFR006WP43590 535 aa8.37□□□□□ -1.07
SFT1YKL006C-A YBL029C-AQ3E756 94 aa8.35□□□□□ -1.07
SFT1YKL006C-A WSC3Q12215 556 aa8.34□□□□□ -1.07
SFT1YKL006C-A STS1P38637 319 aa8.31□□□□□ -1.08
SFT1YKL006C-A RAM2P29703 316 aa8.27□□□□□ -1.09
SFT1YKL006C-A VNX1P42839 908 aa8.27□□□□□ -1.09
SFT1YKL006C-A SIS1P25294 352 aaKnown RBP8.25□□□□□ -1.09
SFT1YKL006C-A SPP1Q03012 353 aa8.24□□□□□ -1.09
SFT1YKL006C-A VMA1P17255 1071 aaKnown RBP8.22□□□□□ -1.09
SFT1YKL006C-A MAK11P20484 414 aaKnown RBP8.2□□□□□ -1.1
SFT1YKL006C-A MIF2P35201 549 aa8.18□□□□□ -1.1
SFT1YKL006C-A TIF11P38912 153 aaKnown RBP8.17□□□□□ -1.1
SFT1YKL006C-A SET4P42948 560 aa8.17□□□□□ -1.1
SFT1YKL006C-A YOL036WQ08206 761 aa8.15□□□□□ -1.1
SFT1YKL006C-A MSB4Q12317 492 aa8.15□□□□□ -1.1
SFT1YKL006C-A ULI1P43604 169 aa8.14□□□□□ -1.11
SFT1YKL006C-A SAM3Q08986 587 aa8.13□□□□□ -1.11
SFT1YKL006C-A EAP1P36041 632 aaKnown RBP8.12□□□□□ -1.11
SFT1YKL006C-A GYP5Q12344 894 aa8.11□□□□□ -1.11
SFT1YKL006C-A COQ8P27697 501 aa8.1□□□□□ -1.11
SFT1YKL006C-A EDS1P38073 919 aa8.06□□□□□ -1.12
SFT1YKL006C-A TRP5P00931 707 aaKnown RBP8.05□□□□□ -1.12
SFT1YKL006C-A PTC3P34221 468 aaKnown RBP8.05□□□□□ -1.12
SFT1YKL006C-A DCW1P36091 449 aa8.05□□□□□ -1.12
SFT1YKL006C-A GRE2Q12068 342 aaKnown RBP8.05□□□□□ -1.12
SFT1YKL006C-A LDB19Q12502 818 aa8.05□□□□□ -1.12
SFT1YKL006C-A IOC2Q12072 812 aa8.04□□□□□ -1.12
SFT1YKL006C-A ATH1P48016 1211 aa8.03□□□□□ -1.12
SFT1YKL006C-A ABP1P15891 592 aaKnown RBP8.02□□□□□ -1.13
SFT1YKL006C-A SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
SFT1YKL006C-A HTA1P04911 132 aaKnown RBP8.01□□□□□ -1.13
SFT1YKL006C-A HTA2P04912 132 aa8.01□□□□□ -1.13
SFT1YKL006C-A DMA1P38823 416 aa8□□□□□ -1.13
SFT1YKL006C-A GUT1P32190 709 aa7.97□□□□□ -1.13
SFT1YKL006C-A NOP53Q12080 455 aaKnown RBP7.97□□□□□ -1.13
SFT1YKL006C-A RTG1P32607 177 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms