RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C MTC1P47018 478 aaKnown RBP12.18□□□□□ -0.46
SLX9YGR081C DRS1P32892 752 aaKnown RBP11.8□□□□□ -0.52
SLX9YGR081C FAP1P53971 965 aa10.38□□□□□ -0.75
SLX9YGR081C DIP2Q12220 943 aaPredicted RBP10.17□□□□□ -0.78
SLX9YGR081C BFR2Q06631 534 aaKnown RBP10.03□□□□□ -0.8
SLX9YGR081C PRI1P10363 409 aa10□□□□□ -0.81
SLX9YGR081C AVT3P36062 692 aa9.98□□□□□ -0.81
SLX9YGR081C ISW2Q08773 1120 aa9.96□□□□□ -0.82
SLX9YGR081C AAD16Q02895 342 aa9.86□□□□□ -0.83
SLX9YGR081C RPG1P38249 964 aaKnown RBP9.84□□□□□ -0.83
SLX9YGR081C PRY3P47033 881 aa9.75□□□□□ -0.85
SLX9YGR081C RSE1Q04693 1361 aaKnown RBP9.72□□□□□ -0.85
SLX9YGR081C TSR3Q12094 313 aaKnown RBP9.46□□□□□ -0.9
SLX9YGR081C RPL17AP05740 184 aaKnown RBP9.38□□□□□ -0.91
SLX9YGR081C RPL17BP46990 184 aaKnown RBP9.38□□□□□ -0.91
SLX9YGR081C YCK3P39962 524 aa9.3□□□□□ -0.92
SLX9YGR081C REB1P21538 810 aa9.28□□□□□ -0.92
SLX9YGR081C TFA1P36100 482 aa9.18□□□□□ -0.94
SLX9YGR081C HAA1Q12753 694 aaKnown RBP9.18□□□□□ -0.94
SLX9YGR081C MRPL32P25348 183 aa9.06□□□□□ -0.96
SLX9YGR081C SPT21P35209 758 aa9.06□□□□□ -0.96
SLX9YGR081C YKR023WP36119 530 aaKnown RBP8.83□□□□□ -1
SLX9YGR081C RIM101P33400 625 aa8.81□□□□□ -1
SLX9YGR081C CDC27P38042 758 aa8.74□□□□□ -1.01
SLX9YGR081C TFC8Q12308 588 aa8.65□□□□□ -1.02
SLX9YGR081C HOP09932 586 aa8.62□□□□□ -1.03
SLX9YGR081C DCD1P06773 312 aa8.58□□□□□ -1.04
SLX9YGR081C YGL015CP33199 130 aa8.56□□□□□ -1.04
SLX9YGR081C OXP1P28273 1286 aa8.54□□□□□ -1.04
SLX9YGR081C UBP10P53874 792 aaPredicted RBP8.44□□□□□ -1.06
SLX9YGR081C MAP2P38174 421 aaKnown RBP8.41□□□□□ -1.06
SLX9YGR081C BCH2P36122 765 aa8.37□□□□□ -1.07
SLX9YGR081C PTP3P40048 928 aa8.35□□□□□ -1.07
SLX9YGR081C YIL055CP40523 627 aaKnown RBP8.34□□□□□ -1.07
SLX9YGR081C SCY1P53009 804 aa8.31□□□□□ -1.08
SLX9YGR081C YAH1Q12184 172 aaKnown RBP8.31□□□□□ -1.08
SLX9YGR081C RSM7P47150 247 aa8.26□□□□□ -1.09
SLX9YGR081C SSP1P38871 571 aa8.22□□□□□ -1.09
SLX9YGR081C YLR271WQ06152 274 aa8.22□□□□□ -1.09
SLX9YGR081C EPS1P40557 701 aa8.21□□□□□ -1.1
SLX9YGR081C SLX5P32828 619 aaKnown RBP8.17□□□□□ -1.1
SLX9YGR081C AI2P03876 854 aa8.15□□□□□ -1.1
SLX9YGR081C BDF1P35817 686 aa8.15□□□□□ -1.1
SLX9YGR081C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
SLX9YGR081C BBC1P47068 1157 aa8.11□□□□□ -1.11
SLX9YGR081C PSD2P53037 1138 aaKnown RBP8.07□□□□□ -1.12
SLX9YGR081C TIF4632P39936 914 aaKnown RBP8.04□□□□□ -1.12
SLX9YGR081C TGL3P40308 642 aa8.01□□□□□ -1.13
SLX9YGR081C MGA2P40578 1113 aa7.98□□□□□ -1.13
SLX9YGR081C CST9Q06032 482 aa7.96□□□□□ -1.14
SLX9YGR081C MRM1P25270 412 aa7.88□□□□□ -1.15
SLX9YGR081C NSR1P27476 414 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
SLX9YGR081C YAP5P40574 245 aa7.76□□□□□ -1.17
SLX9YGR081C MST1P07236 462 aa7.75□□□□□ -1.17
SLX9YGR081C RTG3P38165 486 aa7.74□□□□□ -1.17
SLX9YGR081C RCR1P38212 213 aa7.74□□□□□ -1.17
SLX9YGR081C YOR238WQ08634 303 aa7.73□□□□□ -1.17
SLX9YGR081C VPS29P38759 282 aa7.71□□□□□ -1.18
SLX9YGR081C BUD31P25337 157 aaPredicted RBP7.68□□□□□ -1.18
SLX9YGR081C YMR1P47147 688 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
SLX9YGR081C STS1P38637 319 aa7.64□□□□□ -1.19
SLX9YGR081C PIB1Q06651 286 aa7.63□□□□□ -1.19
SLX9YGR081C RAM2P29703 316 aa7.62□□□□□ -1.19
SLX9YGR081C DBP1P24784 617 aaKnown RBP7.61□□□□□ -1.19
SLX9YGR081C UBP9P39967 754 aa7.6□□□□□ -1.19
SLX9YGR081C YFR006WP43590 535 aa7.59□□□□□ -1.19
SLX9YGR081C GTT3P39996 337 aa7.55□□□□□ -1.2
SLX9YGR081C YBL029C-AQ3E756 94 aa7.55□□□□□ -1.2
SLX9YGR081C MAK11P20484 414 aaKnown RBP7.54□□□□□ -1.2
SLX9YGR081C VMA1P17255 1071 aaKnown RBP7.52□□□□□ -1.21
SLX9YGR081C WSC3Q12215 556 aa7.49□□□□□ -1.21
SLX9YGR081C VNX1P42839 908 aa7.48□□□□□ -1.21
SLX9YGR081C SAM3Q08986 587 aa7.46□□□□□ -1.22
SLX9YGR081C YOL036WQ08206 761 aa7.44□□□□□ -1.22
SLX9YGR081C EDS1P38073 919 aa7.43□□□□□ -1.22
SLX9YGR081C COQ8P27697 501 aa7.42□□□□□ -1.22
SLX9YGR081C MSB4Q12317 492 aa7.42□□□□□ -1.22
SLX9YGR081C MIF2P35201 549 aa7.41□□□□□ -1.22
SLX9YGR081C SPP1Q03012 353 aa7.41□□□□□ -1.22
SLX9YGR081C TIF11P38912 153 aaKnown RBP7.39□□□□□ -1.23
SLX9YGR081C SET4P42948 560 aa7.39□□□□□ -1.23
SLX9YGR081C DMA1P38823 416 aa7.38□□□□□ -1.23
SLX9YGR081C PTC3P34221 468 aaKnown RBP7.36□□□□□ -1.23
SLX9YGR081C GYP5Q12344 894 aa7.35□□□□□ -1.23
SLX9YGR081C ABP1P15891 592 aaKnown RBP7.33□□□□□ -1.24
SLX9YGR081C EAP1P36041 632 aaKnown RBP7.33□□□□□ -1.24
SLX9YGR081C SET1P38827 1080 aaKnown RBP7.33□□□□□ -1.24
SLX9YGR081C ULI1P43604 169 aa7.33□□□□□ -1.24
SLX9YGR081C SIS1P25294 352 aaKnown RBP7.32□□□□□ -1.24
SLX9YGR081C GRE2Q12068 342 aaKnown RBP7.32□□□□□ -1.24
SLX9YGR081C NOP53Q12080 455 aaKnown RBP7.32□□□□□ -1.24
SLX9YGR081C IOC2Q12072 812 aa7.31□□□□□ -1.24
SLX9YGR081C TRP5P00931 707 aaKnown RBP7.3□□□□□ -1.24
SLX9YGR081C DCW1P36091 449 aa7.28□□□□□ -1.24
SLX9YGR081C ATH1P48016 1211 aa7.28□□□□□ -1.24
SLX9YGR081C LDB19Q12502 818 aa7.28□□□□□ -1.24
SLX9YGR081C GUT1P32190 709 aa7.27□□□□□ -1.25
SLX9YGR081C HTA1P04911 132 aaKnown RBP7.26□□□□□ -1.25
SLX9YGR081C HTA2P04912 132 aa7.26□□□□□ -1.25
SLX9YGR081C FKH1P40466 484 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 90.9 ms