Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TMEM56-RWDD3S4R434 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM56-RWDD3S4R434 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TMEM56-RWDD3S4R434 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 AC092720.2-201ENST00000602388 1665 ntBASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM56-RWDD3S4R434 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM56-RWDD3S4R434 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM56-RWDD3S4R434 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 BX323043.1-201ENST00000641006 1765 ntBASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 AC005224.4-201ENST00000583262 1652 ntBASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms