RNA–Protein interactions for RNA: ENST00000610442.1

AC008073.3-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC008073.3, Length 2,281 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008073.3-201ENST00000610442 NISCHQ9Y2I1 1504 aa40■■■■□ 3.99
AC008073.3-201ENST00000610442 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
AC008073.3-201ENST00000610442 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
AC008073.3-201ENST00000610442 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
AC008073.3-201ENST00000610442 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
AC008073.3-201ENST00000610442 ABCC9O60706 1549 aa33.28■■■□□ 2.92
AC008073.3-201ENST00000610442 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
AC008073.3-201ENST00000610442 DCAF8L2P0C7V8 631 aa33.03■■■□□ 2.88
AC008073.3-201ENST00000610442 CHIC1Q5VXU3 224 aa32.68■■■□□ 2.82
AC008073.3-201ENST00000610442 MYO15BQ96JP2 1530 aa32.64■■■□□ 2.82
AC008073.3-201ENST00000610442 NACADO15069 1562 aa32.19■■■□□ 2.74
AC008073.3-201ENST00000610442 HRCP23327 699 aa32.17■■■□□ 2.74
AC008073.3-201ENST00000610442 RB1CC1Q8TDY2 1594 aa32.04■■■□□ 2.72
AC008073.3-201ENST00000610442 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
AC008073.3-201ENST00000610442 PCGF6Q9BYE7 350 aa31.78■■■□□ 2.68
AC008073.3-201ENST00000610442 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
AC008073.3-201ENST00000610442 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
AC008073.3-201ENST00000610442 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
AC008073.3-201ENST00000610442 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
AC008073.3-201ENST00000610442 TRIM26Q12899 539 aaPredicted RBP31.34■■■□□ 2.61
AC008073.3-201ENST00000610442 BICRAQ9NZM4 1560 aa31.27■■■□□ 2.6
AC008073.3-201ENST00000610442 PPARGC1BQ86YN6 1023 aaKnown RBP31.16■■■□□ 2.58
AC008073.3-201ENST00000610442 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
AC008073.3-201ENST00000610442 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.55
AC008073.3-201ENST00000610442 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
AC008073.3-201ENST00000610442 ZEB1P37275 1124 aaPredicted RBP30.91■■■□□ 2.54
AC008073.3-201ENST00000610442 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
AC008073.3-201ENST00000610442 WIZO95785 1651 aa30.89■■■□□ 2.53
AC008073.3-201ENST00000610442 EIF4G1Q04637 1599 aaKnown RBP30.78■■■□□ 2.52
AC008073.3-201ENST00000610442 FAM9AQ8IZU1 332 aaPredicted RBP30.66■■■□□ 2.5
AC008073.3-201ENST00000610442 TOP2AP11388 1531 aaKnown RBP30.54■■■□□ 2.48
AC008073.3-201ENST00000610442 SMARCA4P51532 1647 aa30.46■■■□□ 2.47
AC008073.3-201ENST00000610442 SMARCA2P51531 1590 aa30.33■■■□□ 2.45
AC008073.3-201ENST00000610442 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
AC008073.3-201ENST00000610442 WRNQ14191 1432 aaPredicted RBP eCLIP30.21■■■□□ 2.43
AC008073.3-201ENST00000610442 EHMT2Q96KQ7 1210 aa30.2■■■□□ 2.43
AC008073.3-201ENST00000610442 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
AC008073.3-201ENST00000610442 EEA1Q15075 1411 aa30.13■■■□□ 2.41
AC008073.3-201ENST00000610442 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
AC008073.3-201ENST00000610442 TNIKQ9UKE5 1360 aa30.01■■■□□ 2.39
AC008073.3-201ENST00000610442 CEP162Q5TB80 1403 aa30.01■■■□□ 2.39
AC008073.3-201ENST00000610442 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
AC008073.3-201ENST00000610442 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
AC008073.3-201ENST00000610442 SOGA1O94964 1423 aa29.91■■■□□ 2.38
AC008073.3-201ENST00000610442 DNAJC5BQ9UF47 199 aa29.91■■■□□ 2.38
AC008073.3-201ENST00000610442 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
AC008073.3-201ENST00000610442 BAZ1BQ9UIG0 1483 aaKnown RBP29.84■■■□□ 2.37
AC008073.3-201ENST00000610442 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
AC008073.3-201ENST00000610442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
AC008073.3-201ENST00000610442 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
AC008073.3-201ENST00000610442 CSRNP3Q8WYN3 585 aa29.79■■■□□ 2.36
AC008073.3-201ENST00000610442 KIF21BO75037 1637 aa29.73■■■□□ 2.35
AC008073.3-201ENST00000610442 RUSC2Q8N2Y8 1516 aa29.72■■■□□ 2.35
AC008073.3-201ENST00000610442 PELP1Q8IZL8 1130 aaKnown RBP29.71■■■□□ 2.35
AC008073.3-201ENST00000610442 SCAF1Q9H7N4 1312 aaKnown RBP29.68■■■□□ 2.34
AC008073.3-201ENST00000610442 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
AC008073.3-201ENST00000610442 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
AC008073.3-201ENST00000610442 SYNJ1O43426 1573 aa29.62■■■□□ 2.33
AC008073.3-201ENST00000610442 UBTFP17480 764 aaKnown RBP29.57■■■□□ 2.32
AC008073.3-201ENST00000610442 DIEXFQ68CQ4 756 aaKnown RBP29.45■■■□□ 2.3
AC008073.3-201ENST00000610442 ACIN1Q9UKV3 1341 aaKnown RBP29.42■■■□□ 2.3
AC008073.3-201ENST00000610442 CLIP1P30622 1438 aa29.39■■■□□ 2.3
AC008073.3-201ENST00000610442 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
AC008073.3-201ENST00000610442 TTBK1Q5TCY1 1321 aaPredicted RBP29.37■■■□□ 2.29
AC008073.3-201ENST00000610442 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
AC008073.3-201ENST00000610442 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
AC008073.3-201ENST00000610442 CENPBP07199 599 aaPredicted RBP29.29■■■□□ 2.28
AC008073.3-201ENST00000610442 NEUROD1Q13562 356 aa29.24■■■□□ 2.27
AC008073.3-201ENST00000610442 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
AC008073.3-201ENST00000610442 ZNF316A6NFI3 1004 aaPredicted RBP29.23■■■□□ 2.27
AC008073.3-201ENST00000610442 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
AC008073.3-201ENST00000610442 NESP48681 1621 aa29.14■■■□□ 2.25
AC008073.3-201ENST00000610442 APLP2Q06481 763 aa29.07■■■□□ 2.24
AC008073.3-201ENST00000610442 CFTRP13569 1480 aa29.06■■■□□ 2.24
AC008073.3-201ENST00000610442 PRXQ9BXM0 1461 aa29.05■■■□□ 2.24
AC008073.3-201ENST00000610442 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
AC008073.3-201ENST00000610442 HNRNPUL2Q1KMD3 747 aaKnown RBP28.99■■■□□ 2.23
AC008073.3-201ENST00000610442 GTF3C3Q9Y5Q9 886 aa28.98■■■□□ 2.23
AC008073.3-201ENST00000610442 CLSPNQ9HAW4 1339 aa28.94■■■□□ 2.22
AC008073.3-201ENST00000610442 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
AC008073.3-201ENST00000610442 CUX1P39880 1505 aa28.89■■■□□ 2.21
AC008073.3-201ENST00000610442 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
AC008073.3-201ENST00000610442 KIF27Q86VH2 1401 aa28.83■■■□□ 2.21
AC008073.3-201ENST00000610442 LAMC3Q9Y6N6 1575 aa28.78■■■□□ 2.2
AC008073.3-201ENST00000610442 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
AC008073.3-201ENST00000610442 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
AC008073.3-201ENST00000610442 DHX57Q6P158 1386 aaKnown RBP28.73■■■□□ 2.19
AC008073.3-201ENST00000610442 CUX2O14529 1486 aa28.73■■■□□ 2.19
AC008073.3-201ENST00000610442 MIER1Q8N108 512 aa28.71■■■□□ 2.19
AC008073.3-201ENST00000610442 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
AC008073.3-201ENST00000610442 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
AC008073.3-201ENST00000610442 ARHGAP35Q9NRY4 1499 aa28.63■■■□□ 2.17
AC008073.3-201ENST00000610442 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
AC008073.3-201ENST00000610442 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
AC008073.3-201ENST00000610442 KANK4Q5T7N3 995 aaPredicted RBP28.58■■■□□ 2.17
AC008073.3-201ENST00000610442 YTHDC1Q96MU7 727 aaKnown RBP28.56■■■□□ 2.16
AC008073.3-201ENST00000610442 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
AC008073.3-201ENST00000610442 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
AC008073.3-201ENST00000610442 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
AC008073.3-201ENST00000610442 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms