RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 NISCHQ9Y2I1 1504 aa41.14■■■■■ 4.18
CLINT1-207ENST00000523908 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
CLINT1-207ENST00000523908 ZCCHC6Q5VYS8 1495 aaKnown RBP34.86■■■■□ 3.17
CLINT1-207ENST00000523908 SHROOM4Q9ULL8 1493 aa34.36■■■■□ 3.09
CLINT1-207ENST00000523908 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.05
CLINT1-207ENST00000523908 SUPT5HO00267 1087 aaKnown RBP33.67■■■□□ 2.98
CLINT1-207ENST00000523908 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
CLINT1-207ENST00000523908 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
CLINT1-207ENST00000523908 CHIC1Q5VXU3 224 aa32.97■■■□□ 2.87
CLINT1-207ENST00000523908 ABCC9O60706 1549 aa32.9■■■□□ 2.86
CLINT1-207ENST00000523908 SCRIBQ14160 1630 aa32.61■■■□□ 2.81
CLINT1-207ENST00000523908 NACADO15069 1562 aa32.56■■■□□ 2.8
CLINT1-207ENST00000523908 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
CLINT1-207ENST00000523908 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.75
CLINT1-207ENST00000523908 HRCP23327 699 aa31.86■■■□□ 2.69
CLINT1-207ENST00000523908 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
CLINT1-207ENST00000523908 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
CLINT1-207ENST00000523908 LOC105371045A0A1W2PR82 267 aa31.71■■■□□ 2.67
CLINT1-207ENST00000523908 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
CLINT1-207ENST00000523908 WIZO95785 1651 aa31.64■■■□□ 2.66
CLINT1-207ENST00000523908 PCGF6Q9BYE7 350 aa31.63■■■□□ 2.65
CLINT1-207ENST00000523908 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
CLINT1-207ENST00000523908 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
CLINT1-207ENST00000523908 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
CLINT1-207ENST00000523908 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
CLINT1-207ENST00000523908 SMARCA4P51532 1647 aa31.37■■■□□ 2.61
CLINT1-207ENST00000523908 TRIM26Q12899 539 aaPredicted RBP31.36■■■□□ 2.61
CLINT1-207ENST00000523908 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
CLINT1-207ENST00000523908 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
CLINT1-207ENST00000523908 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
CLINT1-207ENST00000523908 FAM9AQ8IZU1 332 aaPredicted RBP31■■■□□ 2.55
CLINT1-207ENST00000523908 PEG3Q9GZU2 1588 aa30.97■■■□□ 2.55
CLINT1-207ENST00000523908 ZEB1P37275 1124 aaPredicted RBP30.81■■■□□ 2.52
CLINT1-207ENST00000523908 PPARGC1BQ86YN6 1023 aaKnown RBP30.8■■■□□ 2.52
CLINT1-207ENST00000523908 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
CLINT1-207ENST00000523908 EEA1Q15075 1411 aa30.74■■■□□ 2.51
CLINT1-207ENST00000523908 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
CLINT1-207ENST00000523908 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
CLINT1-207ENST00000523908 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
CLINT1-207ENST00000523908 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
CLINT1-207ENST00000523908 SOGA1O94964 1423 aa30.47■■■□□ 2.47
CLINT1-207ENST00000523908 EHMT2Q96KQ7 1210 aa30.46■■■□□ 2.47
CLINT1-207ENST00000523908 CEP162Q5TB80 1403 aa30.42■■■□□ 2.46
CLINT1-207ENST00000523908 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
CLINT1-207ENST00000523908 CSRNP3Q8WYN3 585 aa30.35■■■□□ 2.45
CLINT1-207ENST00000523908 GOLGA3Q08378 1498 aa30.35■■■□□ 2.45
CLINT1-207ENST00000523908 SYNJ1O43426 1573 aa30.31■■■□□ 2.44
CLINT1-207ENST00000523908 KIF21BO75037 1637 aa30.29■■■□□ 2.44
CLINT1-207ENST00000523908 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
CLINT1-207ENST00000523908 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
CLINT1-207ENST00000523908 HMGXB3Q12766 1538 aa30.14■■■□□ 2.42
CLINT1-207ENST00000523908 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
CLINT1-207ENST00000523908 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
CLINT1-207ENST00000523908 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
CLINT1-207ENST00000523908 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
CLINT1-207ENST00000523908 CLIP1P30622 1438 aa29.88■■■□□ 2.37
CLINT1-207ENST00000523908 CCER1Q8TC90 406 aaPredicted RBP29.86■■■□□ 2.37
CLINT1-207ENST00000523908 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
CLINT1-207ENST00000523908 VPS8Q8N3P4 1428 aa29.83■■■□□ 2.37
CLINT1-207ENST00000523908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.82■■■□□ 2.36
CLINT1-207ENST00000523908 RAPGEF2Q9Y4G8 1499 aa29.81■■■□□ 2.36
CLINT1-207ENST00000523908 CFTRP13569 1480 aa29.73■■■□□ 2.35
CLINT1-207ENST00000523908 PRXQ9BXM0 1461 aa29.73■■■□□ 2.35
CLINT1-207ENST00000523908 PRDM2Q13029 1718 aa29.72■■■□□ 2.35
CLINT1-207ENST00000523908 CUX1P39880 1505 aa29.69■■■□□ 2.34
CLINT1-207ENST00000523908 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
CLINT1-207ENST00000523908 TTBK1Q5TCY1 1321 aaPredicted RBP29.55■■■□□ 2.32
CLINT1-207ENST00000523908 ARAP1Q96P48 1450 aa29.46■■■□□ 2.31
CLINT1-207ENST00000523908 APLP2Q06481 763 aa29.45■■■□□ 2.3
CLINT1-207ENST00000523908 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
CLINT1-207ENST00000523908 DIEXFQ68CQ4 756 aaKnown RBP29.27■■■□□ 2.28
CLINT1-207ENST00000523908 ARHGAP35Q9NRY4 1499 aa29.21■■■□□ 2.27
CLINT1-207ENST00000523908 HNRNPUL2Q1KMD3 747 aaKnown RBP29.2■■■□□ 2.27
CLINT1-207ENST00000523908 CUX2O14529 1486 aa29.18■■■□□ 2.26
CLINT1-207ENST00000523908 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
CLINT1-207ENST00000523908 RRBP1Q9P2E9 1410 aaKnown RBP29.18■■■□□ 2.26
CLINT1-207ENST00000523908 CLSPNQ9HAW4 1339 aa29.18■■■□□ 2.26
CLINT1-207ENST00000523908 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
CLINT1-207ENST00000523908 IGF1RP08069 1367 aa29.15■■■□□ 2.26
CLINT1-207ENST00000523908 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
CLINT1-207ENST00000523908 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.26
CLINT1-207ENST00000523908 SCAF1Q9H7N4 1312 aaKnown RBP29.11■■■□□ 2.25
CLINT1-207ENST00000523908 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
CLINT1-207ENST00000523908 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
CLINT1-207ENST00000523908 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
CLINT1-207ENST00000523908 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
CLINT1-207ENST00000523908 CARMIL1Q5VZK9 1371 aa29.02■■■□□ 2.24
CLINT1-207ENST00000523908 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
CLINT1-207ENST00000523908 TIAM1Q13009 1591 aa28.98■■■□□ 2.23
CLINT1-207ENST00000523908 CENPBP07199 599 aaPredicted RBP28.96■■■□□ 2.23
CLINT1-207ENST00000523908 DHX57Q6P158 1386 aaKnown RBP28.96■■■□□ 2.23
CLINT1-207ENST00000523908 ABCA10Q8WWZ4 1543 aa28.94■■■□□ 2.22
CLINT1-207ENST00000523908 CCNB3Q8WWL7 1395 aa28.93■■■□□ 2.22
CLINT1-207ENST00000523908 CUL7Q14999 1698 aa28.89■■■□□ 2.21
CLINT1-207ENST00000523908 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
CLINT1-207ENST00000523908 CFAP43Q8NDM7 1665 aa28.88■■■□□ 2.21
CLINT1-207ENST00000523908 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
CLINT1-207ENST00000523908 NEUROD1Q13562 356 aa28.85■■■□□ 2.21
CLINT1-207ENST00000523908 EFCAB5A4FU69 1503 aa28.84■■■□□ 2.21
CLINT1-207ENST00000523908 POLA1P09884 1462 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms