Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MST1L-201ENST00000442552 2185 ntBASIC14.44□□□□□ -0.1
VPS25Q9BRG1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 OR6D1P-203ENST00000641209 4860 ntBASIC14.44□□□□□ -0.1
VPS25Q9BRG1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 AC046158.3-201ENST00000624947 2558 ntBASIC14.43□□□□□ -0.1
VPS25Q9BRG1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS25Q9BRG1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS25Q9BRG1 PRORSD1P-202ENST00000563365 2154 ntBASIC14.41□□□□□ -0.1
VPS25Q9BRG1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 AL365209.1-201ENST00000624418 6473 ntBASIC14.41□□□□□ -0.1
VPS25Q9BRG1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS25Q9BRG1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms